Wall clock time and date at job start Sat Mar 6 2021 19:41:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81403 * 1 3 3 C 1.81398 * 103.00085 * 2 1 4 4 H 1.09009 * 112.84923 * 316.19715 * 3 2 1 5 5 C 1.54049 * 113.69477 * 87.46713 * 3 2 1 6 6 C 1.53784 * 86.98600 * 139.99264 * 5 3 2 7 7 H 1.08996 * 113.61359 * 219.98258 * 6 5 3 8 8 N 1.46499 * 113.61779 * 89.15904 * 6 5 3 9 9 C 1.34778 * 119.99708 * 105.86388 * 8 6 5 10 10 O 1.21572 * 120.00160 * 0.02562 * 9 8 6 11 11 C 1.47699 * 119.99752 * 180.02562 * 9 8 6 12 12 C 1.39800 * 120.15047 * 180.02562 * 11 9 8 13 13 F 1.35099 * 120.09118 * 359.94559 * 12 11 9 14 14 C 1.38319 * 119.83108 * 179.97438 * 12 11 9 15 15 C 1.38187 * 120.14357 * 359.97438 * 14 12 11 16 16 C 1.50699 * 119.84298 * 180.02562 * 15 14 12 17 17 O 1.42901 * 109.46830 * 255.00252 * 16 15 14 18 18 Si 1.86298 * 109.46950 * 135.00690 * 16 15 14 19 19 C 1.38658 * 120.31250 * 0.28399 * 15 14 12 20 20 F 1.35102 * 119.91688 * 179.72258 * 19 15 14 21 21 C 1.38070 * 120.16977 * 359.44223 * 19 15 14 22 22 C 1.53781 * 113.61652 * 185.00264 * 3 2 1 23 23 H 1.09002 * 109.47434 * 59.99800 * 1 2 3 24 24 H 1.08995 * 109.47208 * 180.02562 * 1 2 3 25 25 H 1.09001 * 109.47122 * 299.99985 * 1 2 3 26 26 H 1.08996 * 113.61628 * 25.48643 * 5 3 2 27 27 H 1.09009 * 113.69661 * 254.50433 * 5 3 2 28 28 H 0.97002 * 120.00073 * 285.86899 * 8 6 5 29 29 H 1.07995 * 119.92984 * 179.97438 * 14 12 11 30 30 H 1.08991 * 109.47351 * 15.00400 * 16 15 14 31 31 H 0.96708 * 114.00246 * 299.99864 * 17 16 15 32 32 H 1.48506 * 109.99834 * 180.02562 * 18 16 15 33 33 H 1.48502 * 110.00011 * 301.31529 * 18 16 15 34 34 H 1.07997 * 120.07695 * 180.25969 * 21 19 15 35 35 H 1.08996 * 113.61309 * 105.38113 * 22 3 2 36 36 H 1.08999 * 113.68801 * 334.49516 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2221 1.7675 0.0000 4 1 1.6109 2.3430 -0.6953 5 6 2.3006 2.3847 1.4093 6 6 3.5202 3.1752 0.9067 7 1 4.3238 3.2505 1.6392 8 7 3.1758 4.4660 0.3053 9 6 3.4207 5.6088 0.9765 10 8 3.9277 5.5686 2.0807 11 6 3.0730 6.9101 0.3704 12 6 3.3260 8.0975 1.0636 13 9 3.8887 8.0585 2.2911 14 6 2.9982 9.3125 0.4895 15 6 2.4225 9.3540 -0.7660 16 6 2.0686 10.6815 -1.3852 17 8 0.6539 10.8736 -1.3239 18 14 2.6218 10.7041 -3.1641 19 6 2.1640 8.1797 -1.4565 20 9 1.5957 8.2293 -2.6812 21 6 2.4911 6.9600 -0.8982 22 6 3.7284 2.0520 -0.1229 23 1 -0.3634 0.5139 -0.8900 24 1 -0.3633 -1.0276 0.0005 25 1 -0.3633 0.5138 0.8900 26 1 2.5399 1.6623 2.1896 27 1 1.4462 3.0133 1.6605 28 1 2.7716 4.4981 -0.5759 29 1 3.1926 10.2307 1.0237 30 1 2.5680 11.4818 -0.8393 31 1 0.1444 10.1965 -1.7899 32 1 2.2790 12.0084 -3.7860 33 1 4.0866 10.4735 -3.2434 34 1 2.2930 6.0465 -1.4391 35 1 4.0258 2.4119 -1.1078 36 1 4.3584 1.2394 0.2388 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12525166_12360598.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:41:57 Heat of formation + Delta-G solvation = -89.027394 kcal Electronic energy + Delta-G solvation = -23937.631342 eV Core-core repulsion = 19959.134167 eV Total energy + Delta-G solvation = -3978.497174 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.073 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -50.38575 -50.14430 -41.62481 -40.25300 -39.13983 -37.67553 -34.76791 -32.97250 -31.38774 -29.81562 -28.11359 -26.80694 -26.20670 -24.55594 -23.72912 -22.14780 -20.80544 -19.62302 -19.02607 -18.54682 -17.98349 -17.82493 -17.37296 -17.07119 -16.84799 -16.68121 -16.16223 -16.00759 -15.83771 -15.70206 -15.54397 -15.37848 -14.95502 -14.51330 -14.46324 -14.25680 -14.04506 -13.84908 -13.71599 -13.55736 -13.40265 -13.05424 -12.54294 -12.52773 -12.17402 -11.82694 -11.60983 -11.32985 -10.83584 -10.81818 -10.41730 -10.24422 -9.84447 -8.68195 -4.89086 -0.83514 -0.31062 0.77854 1.11261 1.36106 1.59161 1.62555 1.76947 1.89721 2.22492 2.73036 2.81887 3.08003 3.25988 3.32209 3.36631 3.45552 3.50263 3.69369 3.79595 3.93260 4.14923 4.23967 4.32562 4.33653 4.33931 4.45678 4.58254 4.67417 4.68944 4.72466 4.75731 4.79032 4.87848 4.90815 4.96434 5.35402 5.40981 6.26684 6.57372 6.95601 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.113 4.113 2 S -0.304 6.304 3 C -0.070 4.070 4 H 0.125 0.875 5 C -0.136 4.136 6 C 0.122 3.878 7 H 0.093 0.907 8 N -0.688 5.688 9 C 0.562 3.438 10 O -0.561 6.561 11 C -0.153 4.153 12 C 0.133 3.867 13 F -0.129 7.129 14 C -0.118 4.118 15 C -0.093 4.093 16 C -0.074 4.074 17 O -0.544 6.544 18 Si 0.746 3.254 19 C 0.089 3.911 20 F -0.091 7.091 21 C -0.066 4.066 22 C -0.106 4.106 23 H 0.088 0.912 24 H 0.102 0.898 25 H 0.081 0.919 26 H 0.098 0.902 27 H 0.075 0.925 28 H 0.418 0.582 29 H 0.165 0.835 30 H 0.126 0.874 31 H 0.395 0.605 32 H -0.286 1.286 33 H -0.284 1.284 34 H 0.191 0.809 35 H 0.104 0.896 36 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.899 -1.797 -6.282 7.609 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.281 4.281 2 S -0.076 6.076 3 C -0.198 4.198 4 H 0.143 0.857 5 C -0.177 4.177 6 C 0.014 3.986 7 H 0.111 0.889 8 N -0.341 5.341 9 C 0.349 3.651 10 O -0.440 6.440 11 C -0.157 4.157 12 C 0.112 3.888 13 F -0.107 7.107 14 C -0.137 4.137 15 C -0.095 4.095 16 C -0.184 4.184 17 O -0.352 6.352 18 Si 0.650 3.350 19 C 0.069 3.931 20 F -0.069 7.069 21 C -0.085 4.085 22 C -0.145 4.145 23 H 0.107 0.893 24 H 0.121 0.879 25 H 0.100 0.900 26 H 0.116 0.884 27 H 0.094 0.906 28 H 0.257 0.743 29 H 0.183 0.817 30 H 0.143 0.857 31 H 0.245 0.755 32 H -0.213 1.213 33 H -0.210 1.210 34 H 0.208 0.792 35 H 0.122 0.878 36 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -2.217 -1.874 -5.779 6.467 hybrid contribution -0.747 1.196 0.656 1.555 sum -2.964 -0.677 -5.124 5.958 Atomic orbital electron populations 1.23391 0.91950 1.07067 1.05735 1.87187 1.10142 1.12560 1.97705 1.24878 1.01159 0.92865 1.00917 0.85734 1.23781 0.98789 0.99004 0.96162 1.21792 0.98219 0.81682 0.96884 0.88851 1.45365 1.63020 1.04080 1.21590 1.18068 0.78043 0.84279 0.84708 1.90884 1.44305 1.87645 1.21186 1.19798 1.06867 0.92236 0.96831 1.18008 0.95652 0.93988 0.81125 1.91592 1.81831 1.97224 1.40069 1.21052 1.00084 0.97488 0.95062 1.20503 0.98411 0.96090 0.94460 1.25143 0.86715 0.94515 1.12031 1.86564 1.14863 1.54545 1.79178 0.93794 0.80104 0.84350 0.76738 1.17182 1.00187 0.93334 0.82410 1.91241 1.81803 1.95140 1.38705 1.21350 0.95475 0.98946 0.92705 1.23125 0.93501 0.97038 1.00828 0.89276 0.87922 0.89993 0.88377 0.90593 0.74268 0.81702 0.85670 0.75482 1.21343 1.20991 0.79150 0.87775 0.87943 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.52 10.76 113.37 1.22 1.74 16 2 S -0.30 0.10 22.19 -56.49 -1.25 -1.15 16 3 C -0.07 0.40 4.16 31.21 0.13 0.53 16 4 H 0.12 -1.22 8.14 -2.38 -0.02 -1.24 16 5 C -0.14 0.48 7.49 31.21 0.23 0.71 16 6 C 0.12 -0.40 4.30 45.52 0.20 -0.20 16 7 H 0.09 0.15 7.50 -2.39 -0.02 0.13 16 8 N -0.69 3.56 5.21 -443.04 -2.31 1.25 16 9 C 0.56 1.48 7.77 86.74 0.67 2.15 16 10 O -0.56 -7.20 14.96 -3.94 -0.06 -7.26 16 11 C -0.15 0.15 5.88 -20.06 -0.12 0.03 16 12 C 0.13 0.38 7.28 22.67 0.17 0.55 16 13 F -0.13 -1.26 15.55 44.97 0.70 -0.56 16 14 C -0.12 0.18 9.63 22.28 0.21 0.39 16 15 C -0.09 0.38 4.78 -19.78 -0.09 0.29 16 16 C -0.07 0.29 2.80 71.24 0.20 0.49 16 17 O -0.54 1.49 12.88 -148.98 -1.92 -0.43 16 18 Si 0.75 -2.39 29.58 68.60 2.03 -0.37 16 19 C 0.09 -0.65 6.59 22.33 0.15 -0.51 16 20 F -0.09 0.93 13.43 44.97 0.60 1.54 16 21 C -0.07 0.56 9.52 22.57 0.21 0.78 16 22 C -0.11 0.68 7.41 31.12 0.23 0.91 16 23 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 24 H 0.10 -0.49 8.14 -2.39 -0.02 -0.51 16 25 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 26 H 0.10 -0.15 8.11 -2.39 -0.02 -0.17 16 27 H 0.08 -0.23 8.14 -2.38 -0.02 -0.25 16 28 H 0.42 -5.34 6.74 -92.71 -0.62 -5.97 16 29 H 0.17 -0.67 7.99 -2.91 -0.02 -0.69 16 30 H 0.13 -0.53 7.76 -2.39 -0.02 -0.55 16 31 H 0.40 -4.08 8.36 -74.05 -0.62 -4.70 16 32 H -0.29 -1.09 7.11 99.48 0.71 -0.38 16 33 H -0.28 -0.63 7.11 99.48 0.71 0.08 16 34 H 0.19 -3.21 6.40 -2.91 -0.02 -3.23 16 35 H 0.10 -1.02 8.14 -2.39 -0.02 -1.04 16 36 H 0.10 -0.48 8.10 -2.39 -0.02 -0.50 16 Total: 0.00 -20.37 326.19 1.14 -19.23 By element: Atomic # 1 Polarization: -20.03 SS G_CDS: -0.06 Total: -20.10 kcal Atomic # 6 Polarization: 4.44 SS G_CDS: 3.41 Total: 7.86 kcal Atomic # 7 Polarization: 3.56 SS G_CDS: -2.31 Total: 1.25 kcal Atomic # 8 Polarization: -5.71 SS G_CDS: -1.98 Total: -7.69 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 1.30 Total: 0.97 kcal Atomic # 14 Polarization: -2.39 SS G_CDS: 2.03 Total: -0.37 kcal Atomic # 16 Polarization: 0.10 SS G_CDS: -1.25 Total: -1.15 kcal Total: -20.37 1.14 -19.23 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525166_12360598.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.799 kcal (2) G-P(sol) polarization free energy of solvation -20.368 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.167 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.139 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.228 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.027 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds