Wall clock time and date at job start Sat Mar 6 2021 19:43:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35993 * 117.00914 * 2 1 4 4 C 1.38559 * 120.05976 * 0.29523 * 3 2 1 5 5 C 1.38276 * 120.01795 * 180.25344 * 4 3 2 6 6 C 1.50703 * 119.92271 * 179.72400 * 5 4 3 7 7 O 1.42896 * 109.47055 * 299.72750 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 179.72642 * 6 5 4 9 9 C 1.38208 * 120.15614 * 359.45053 * 5 4 3 10 10 C 1.38383 * 120.12685 * 0.27431 * 9 5 4 11 11 Cl 1.73603 * 120.00494 * 179.97438 * 10 9 5 12 12 C 1.38615 * 119.98120 * 0.02562 * 10 9 5 13 13 O 1.36027 * 120.07277 * 179.97438 * 12 10 9 14 14 C 1.42898 * 116.99980 * 90.00295 * 13 12 10 15 15 C 1.52994 * 109.47573 * 89.99753 * 14 13 12 16 16 C 1.50704 * 109.46760 * 209.99661 * 14 13 12 17 17 O 1.21275 * 120.00002 * 359.97438 * 16 14 13 18 18 N 1.34779 * 119.99819 * 180.02562 * 16 14 13 19 19 C 1.46500 * 119.99708 * 180.02562 * 18 16 14 20 20 H 1.08994 * 112.85208 * 334.65876 * 19 18 16 21 21 C 1.53782 * 113.61597 * 105.86556 * 19 18 16 22 22 C 1.54051 * 86.98793 * 89.15734 * 21 19 18 23 23 H 1.08997 * 113.60993 * 270.88084 * 22 21 19 24 24 S 1.81399 * 113.69371 * 139.98968 * 22 21 19 25 25 C 1.81402 * 102.99915 * 87.46581 * 24 22 21 26 26 C 1.53781 * 87.07599 * 25.43247 * 22 21 19 27 27 H 1.08996 * 109.47835 * 180.02562 * 1 2 3 28 28 H 1.08997 * 109.46879 * 300.00345 * 1 2 3 29 29 H 1.09006 * 109.46768 * 59.99989 * 1 2 3 30 30 H 1.08004 * 119.99245 * 359.97438 * 4 3 2 31 31 H 1.09002 * 109.47152 * 59.72558 * 6 5 4 32 32 H 0.96703 * 114.00193 * 180.02562 * 7 6 5 33 33 H 1.48495 * 110.00011 * 60.00027 * 8 6 5 34 34 H 1.48509 * 109.99497 * 181.32041 * 8 6 5 35 35 H 1.07994 * 119.93903 * 180.24913 * 9 5 4 36 36 H 1.08993 * 109.47253 * 329.99316 * 14 13 12 37 37 H 1.08999 * 109.47577 * 180.02562 * 15 14 13 38 38 H 1.09007 * 109.47035 * 299.99666 * 15 14 13 39 39 H 1.09000 * 109.47419 * 59.99805 * 15 14 13 40 40 H 0.97000 * 120.00271 * 359.97438 * 18 16 14 41 41 H 1.09008 * 113.61223 * 203.66446 * 21 19 18 42 42 H 1.09005 * 113.61260 * 334.55545 * 21 19 18 43 43 H 1.08998 * 109.47137 * 299.99820 * 25 24 22 44 44 H 1.08999 * 109.47172 * 60.00125 * 25 24 22 45 45 H 1.09000 * 109.47483 * 179.97438 * 25 24 22 46 46 H 1.09002 * 113.60972 * 220.02472 * 26 22 21 47 47 H 1.09000 * 113.69176 * 89.13194 * 26 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2933 2.3746 0.0062 5 6 1.9221 3.6061 0.0009 6 6 1.1007 4.8696 0.0013 7 8 0.2763 4.9021 -1.1654 8 14 2.2350 6.3475 0.0018 9 6 3.3022 3.6810 0.0009 10 6 4.0606 2.5235 0.0004 11 17 5.7939 2.6212 -0.0002 12 6 3.4359 1.2860 -0.0005 13 8 4.1796 0.1471 -0.0015 14 6 4.5343 -0.3972 1.2713 15 6 3.4531 -1.3800 1.7250 16 6 5.8532 -1.1177 1.1596 17 8 6.4321 -1.1612 0.0948 18 7 6.3889 -1.7146 2.2428 19 6 7.6712 -2.4145 2.1342 20 1 7.8770 -2.7668 1.1235 21 6 8.8449 -1.6525 2.7720 22 6 8.4980 -2.3803 4.0847 23 1 7.7700 -1.8501 4.6986 24 16 9.9522 -2.9204 5.0250 25 6 10.3430 -1.4695 6.0412 26 6 7.8804 -3.4882 3.2152 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5139 -0.8900 30 1 0.2147 2.3192 0.0106 31 1 0.4719 4.8938 0.8913 32 1 -0.2808 5.6898 -1.2315 33 1 3.0976 6.3261 -1.2066 34 1 1.4373 7.5998 0.0344 35 1 3.7896 4.6446 0.0008 36 1 4.6213 0.4089 1.9997 37 1 3.7234 -1.7948 2.6961 38 1 2.4991 -0.8588 1.8059 39 1 3.3661 -2.1862 0.9966 40 1 5.9257 -1.6801 3.0943 41 1 9.8175 -1.9278 2.3639 42 1 8.6931 -0.5740 2.8157 43 1 10.5552 -0.6188 5.3936 44 1 9.4931 -1.2352 6.6821 45 1 11.2154 -1.6827 6.6589 46 1 6.9503 -3.8907 3.6166 47 1 8.5886 -4.2652 2.9276 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12525166_13428712.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:43:01 Heat of formation + Delta-G solvation = -77.834467 kcal Electronic energy + Delta-G solvation = -31968.394354 eV Core-core repulsion = 27465.513459 eV Total energy + Delta-G solvation = -4502.880895 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.099 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.95213 -41.22508 -39.71479 -39.19707 -38.57480 -37.70225 -37.03285 -34.59694 -32.88394 -31.42290 -31.33933 -29.93484 -28.70656 -26.90120 -26.85026 -26.55171 -25.07577 -23.61445 -22.72433 -21.78056 -20.71749 -19.55775 -18.81032 -18.67526 -18.41398 -17.94707 -17.75474 -17.00064 -16.91310 -16.68148 -16.29160 -16.13179 -16.00568 -15.78171 -15.49122 -15.33002 -15.14542 -14.73846 -14.56899 -14.46504 -14.24420 -14.13223 -14.04724 -13.82096 -13.65011 -13.61531 -13.37815 -13.26417 -12.97811 -12.92116 -12.62289 -12.53880 -12.42840 -12.05719 -11.94556 -11.88105 -11.79295 -11.63137 -11.26119 -10.88834 -10.69187 -10.58150 -10.13872 -9.77925 -9.38268 -8.65642 -5.07932 -0.28937 0.01446 0.71042 0.95006 1.11093 1.49219 1.53031 1.59573 1.67208 1.86273 2.13517 2.19314 2.69504 3.10061 3.26184 3.29639 3.48865 3.55652 3.65688 3.74086 3.80582 3.82393 3.83621 3.95414 3.99926 4.00994 4.10538 4.14260 4.16078 4.19155 4.24023 4.41782 4.45912 4.51169 4.61528 4.64397 4.68411 4.71241 4.72909 4.74548 4.84385 4.85407 4.94951 5.10395 5.12852 5.20339 5.46961 5.90326 6.25820 6.31250 6.46336 7.19941 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 O -0.296 6.296 3 C 0.131 3.869 4 C -0.168 4.168 5 C -0.022 4.022 6 C -0.076 4.076 7 O -0.534 6.534 8 Si 0.678 3.322 9 C -0.134 4.134 10 C -0.011 4.011 11 Cl -0.034 7.034 12 C 0.071 3.929 13 O -0.280 6.280 14 C 0.075 3.925 15 C -0.169 4.169 16 C 0.521 3.479 17 O -0.503 6.503 18 N -0.714 5.714 19 C 0.126 3.874 20 H 0.112 0.888 21 C -0.138 4.138 22 C -0.085 4.085 23 H 0.103 0.897 24 S -0.251 6.251 25 C -0.122 4.122 26 C -0.115 4.115 27 H 0.106 0.894 28 H 0.058 0.942 29 H 0.060 0.940 30 H 0.144 0.856 31 H 0.083 0.917 32 H 0.383 0.617 33 H -0.249 1.249 34 H -0.256 1.256 35 H 0.144 0.856 36 H 0.089 0.911 37 H 0.071 0.929 38 H 0.079 0.921 39 H 0.075 0.925 40 H 0.400 0.600 41 H 0.105 0.895 42 H 0.076 0.924 43 H 0.077 0.923 44 H 0.076 0.924 45 H 0.101 0.899 46 H 0.085 0.915 47 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.040 2.376 7.463 9.314 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.209 6.209 3 C 0.084 3.916 4 C -0.187 4.187 5 C -0.023 4.023 6 C -0.185 4.185 7 O -0.342 6.342 8 Si 0.578 3.422 9 C -0.153 4.153 10 C -0.039 4.039 11 Cl -0.004 7.004 12 C 0.025 3.975 13 O -0.195 6.195 14 C 0.016 3.984 15 C -0.227 4.227 16 C 0.306 3.694 17 O -0.376 6.376 18 N -0.368 5.368 19 C 0.019 3.981 20 H 0.130 0.870 21 C -0.179 4.179 22 C -0.214 4.214 23 H 0.122 0.878 24 S -0.023 6.023 25 C -0.291 4.291 26 C -0.154 4.154 27 H 0.124 0.876 28 H 0.077 0.923 29 H 0.079 0.921 30 H 0.161 0.839 31 H 0.101 0.899 32 H 0.232 0.768 33 H -0.174 1.174 34 H -0.181 1.181 35 H 0.161 0.839 36 H 0.107 0.893 37 H 0.089 0.911 38 H 0.098 0.902 39 H 0.094 0.906 40 H 0.235 0.765 41 H 0.124 0.876 42 H 0.095 0.905 43 H 0.096 0.904 44 H 0.095 0.905 45 H 0.120 0.880 46 H 0.103 0.897 47 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges -3.221 1.233 5.980 6.903 hybrid contribution -2.105 1.685 0.191 2.703 sum -5.326 2.918 6.171 8.658 Atomic orbital electron populations 1.23213 0.77710 1.04691 1.01779 1.86222 1.21702 1.25148 1.87823 1.19142 0.90782 0.85438 0.96193 1.21103 1.00904 0.90599 1.06069 1.18960 0.92100 0.93742 0.97449 1.24763 0.99413 1.03636 0.90708 1.86581 1.57836 1.46840 1.42903 0.95043 0.82311 0.75347 0.89456 1.20665 0.92626 0.97299 1.04670 1.20923 0.86595 0.93062 1.03286 1.98424 1.07127 1.98438 1.96448 1.17537 0.86645 0.85540 1.07754 1.86307 1.69405 1.37435 1.26398 1.22169 0.93023 0.96852 0.86376 1.22290 0.98789 0.99968 1.01654 1.20229 0.86022 0.79059 0.84139 1.90773 1.61712 1.57658 1.27413 1.45573 1.22646 1.56314 1.12247 1.21782 0.82891 0.92734 1.00659 0.86983 1.23827 0.99794 1.00406 0.93918 1.24853 0.97598 1.01546 0.97405 0.87838 1.86964 1.38279 1.25021 1.52019 1.23374 1.05415 0.98589 1.01701 1.23164 1.01627 0.96192 0.94452 0.87562 0.92296 0.92113 0.83851 0.89874 0.76814 1.17353 1.18101 0.83860 0.89350 0.91064 0.90233 0.90584 0.76511 0.87642 0.90543 0.90375 0.90525 0.88040 0.89671 0.87516 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.30 -0.32 8.18 -34.21 -0.28 -0.60 16 3 C 0.13 0.23 6.54 -39.13 -0.26 -0.02 16 4 C -0.17 -0.09 8.60 -39.45 -0.34 -0.43 16 5 C -0.02 -0.01 5.42 -104.62 -0.57 -0.58 16 6 C -0.08 0.10 2.81 36.01 0.10 0.20 16 7 O -0.53 0.06 12.75 -35.23 -0.45 -0.39 16 8 Si 0.68 -1.07 29.78 -169.99 -5.06 -6.13 16 9 C -0.13 -0.12 8.45 -39.54 -0.33 -0.46 16 10 C -0.01 -0.03 6.33 -39.39 -0.25 -0.28 16 11 Cl -0.03 -0.10 28.50 -51.86 -1.48 -1.58 16 12 C 0.07 0.22 5.56 -39.11 -0.22 0.00 16 13 O -0.28 -1.20 8.48 -47.45 -0.40 -1.61 16 14 C 0.08 0.08 3.20 -27.88 -0.09 -0.01 16 15 C -0.17 0.18 8.99 37.15 0.33 0.51 16 16 C 0.52 1.25 7.23 -10.98 -0.08 1.17 16 17 O -0.50 -3.53 16.12 -14.35 -0.23 -3.76 16 18 N -0.71 0.71 5.16 -53.02 -0.27 0.43 16 19 C 0.13 -0.07 4.30 -67.12 -0.29 -0.36 16 20 H 0.11 0.14 7.50 -51.93 -0.39 -0.25 16 21 C -0.14 0.11 7.49 -25.78 -0.19 -0.08 16 22 C -0.09 0.13 4.16 -25.78 -0.11 0.02 16 23 H 0.10 -0.26 8.14 -51.93 -0.42 -0.69 16 24 S -0.25 -0.15 22.19 -107.50 -2.38 -2.54 16 25 C -0.12 0.16 10.76 101.05 1.09 1.25 16 26 C -0.11 0.21 7.41 -25.92 -0.19 0.02 16 27 H 0.11 -0.40 8.14 -51.93 -0.42 -0.83 16 28 H 0.06 -0.22 7.65 -51.93 -0.40 -0.62 16 29 H 0.06 -0.14 7.68 -51.93 -0.40 -0.54 16 30 H 0.14 -0.16 6.30 -52.48 -0.33 -0.49 16 31 H 0.08 -0.29 7.96 -51.93 -0.41 -0.71 16 32 H 0.38 -1.57 8.74 45.56 0.40 -1.17 16 33 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 34 H -0.26 -0.05 7.11 56.52 0.40 0.35 16 35 H 0.14 -0.10 4.86 -52.49 -0.26 -0.36 16 36 H 0.09 -0.07 7.91 -51.93 -0.41 -0.48 16 37 H 0.07 -0.26 7.56 -51.93 -0.39 -0.65 16 38 H 0.08 -0.08 6.28 -51.92 -0.33 -0.40 16 39 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 40 H 0.40 -1.54 8.12 -40.82 -0.33 -1.87 16 41 H 0.11 -0.03 8.11 -51.92 -0.42 -0.45 16 42 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 43 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 44 H 0.08 -0.16 8.14 -51.92 -0.42 -0.58 16 45 H 0.10 -0.17 8.14 -51.92 -0.42 -0.59 16 46 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 47 H 0.11 -0.15 8.10 -51.93 -0.42 -0.57 16 LS Contribution 414.33 15.07 6.24 6.24 Total: 0.00 -9.68 414.33 -11.38 -21.06 By element: Atomic # 1 Polarization: -6.36 SS G_CDS: -6.67 Total: -13.03 kcal Atomic # 6 Polarization: 2.29 SS G_CDS: -0.40 Total: 1.89 kcal Atomic # 7 Polarization: 0.71 SS G_CDS: -0.27 Total: 0.43 kcal Atomic # 8 Polarization: -4.99 SS G_CDS: -1.36 Total: -6.35 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.06 Total: -6.13 kcal Atomic # 16 Polarization: -0.15 SS G_CDS: -2.38 Total: -2.54 kcal Atomic # 17 Polarization: -0.10 SS G_CDS: -1.48 Total: -1.58 kcal Total LS contribution 6.24 Total: 6.24 kcal Total: -9.68 -11.38 -21.06 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525166_13428712.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.771 kcal (2) G-P(sol) polarization free energy of solvation -9.679 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.450 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.384 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.063 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.834 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds