Wall clock time and date at job start Sat Mar 6 2021 19:43:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81406 * 1 3 3 C 1.81407 * 102.99516 * 2 1 4 4 H 1.09002 * 112.85201 * 43.80416 * 3 2 1 5 5 C 1.53784 * 113.61042 * 175.00108 * 3 2 1 6 6 C 1.53778 * 87.08187 * 139.98219 * 5 3 2 7 7 H 1.09000 * 113.61297 * 219.93823 * 6 5 3 8 8 N 1.46501 * 113.61808 * 89.11223 * 6 5 3 9 9 C 1.34773 * 119.99916 * 155.00224 * 8 6 5 10 10 O 1.21284 * 120.00245 * 359.97438 * 9 8 6 11 11 C 1.50696 * 120.00187 * 179.97438 * 9 8 6 12 12 O 1.42902 * 109.47499 * 179.97438 * 11 9 8 13 13 C 1.35900 * 117.00003 * 179.97438 * 12 11 9 14 14 C 1.38736 * 120.05452 * 180.02562 * 13 12 11 15 15 C 1.38141 * 119.94155 * 180.02562 * 14 13 12 16 16 C 1.38263 * 120.06018 * 0.02562 * 15 14 13 17 17 C 1.50697 * 119.94583 * 179.97438 * 16 15 14 18 18 O 1.42895 * 109.47590 * 300.00259 * 17 16 15 19 19 Si 1.86300 * 109.47007 * 179.97438 * 17 16 15 20 20 C 1.38271 * 120.10967 * 0.25348 * 16 15 14 21 21 C 1.38148 * 120.05274 * 359.44682 * 20 16 15 22 22 C 1.53783 * 113.61152 * 272.49197 * 3 2 1 23 23 H 1.09001 * 109.46901 * 60.00278 * 1 2 3 24 24 H 1.08999 * 109.46663 * 180.02562 * 1 2 3 25 25 H 1.08999 * 109.47307 * 300.00183 * 1 2 3 26 26 H 1.08993 * 113.61812 * 25.43001 * 5 3 2 27 27 H 1.09006 * 113.61061 * 254.52435 * 5 3 2 28 28 H 0.96995 * 119.99923 * 335.00450 * 8 6 5 29 29 H 1.08999 * 109.46800 * 59.99840 * 11 9 8 30 30 H 1.08995 * 109.47383 * 300.00029 * 11 9 8 31 31 H 1.07995 * 120.02461 * 0.02562 * 14 13 12 32 32 H 1.07999 * 119.96989 * 180.02562 * 15 14 13 33 33 H 1.09001 * 109.46613 * 60.00397 * 17 16 15 34 34 H 0.96695 * 114.00385 * 180.02562 * 18 17 16 35 35 H 1.48506 * 110.00048 * 60.00676 * 19 17 16 36 36 H 1.48502 * 109.99996 * 181.32001 * 19 17 16 37 37 H 1.07996 * 119.97091 * 179.70739 * 20 16 15 38 38 H 1.07997 * 120.02591 * 180.24693 * 21 20 16 39 39 H 1.09003 * 113.60758 * 105.47540 * 22 3 2 40 40 H 1.08995 * 113.61503 * 334.57132 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8141 0.0000 0.0000 3 6 2.2220 1.7676 0.0000 4 1 1.6108 2.3431 0.6953 5 6 3.7283 2.0521 0.1228 6 6 3.5205 3.1739 -0.9083 7 1 4.3243 3.2480 -1.6408 8 7 3.1760 4.4656 -0.3090 9 6 3.4492 5.6087 -0.9684 10 8 3.9808 5.5682 -2.0579 11 6 3.0944 6.9374 -0.3522 12 8 3.4813 7.9912 -1.2365 13 6 3.2294 9.2627 -0.8284 14 6 3.5785 10.3342 -1.6376 15 6 3.3219 11.6258 -1.2202 16 6 2.7183 11.8513 0.0031 17 6 2.4401 13.2614 0.4561 18 8 3.6686 13.9867 0.5377 19 14 1.6265 13.2262 2.1317 20 6 2.3747 10.7854 0.8140 21 6 2.6235 9.4916 0.3984 22 6 2.3008 2.3816 -1.4078 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3632 -1.0277 0.0005 25 1 -0.3634 0.5138 0.8899 26 1 4.3572 1.2384 -0.2381 27 1 4.0255 2.4136 1.1073 28 1 2.7513 4.4980 0.5625 29 1 3.6184 7.0492 0.5969 30 1 2.0189 6.9828 -0.1810 31 1 4.0504 10.1586 -2.5930 32 1 3.5931 12.4602 -1.8500 33 1 1.7772 13.7486 -0.2590 34 1 3.5652 14.9044 0.8243 35 1 2.5198 12.5641 3.1162 36 1 1.3181 14.6093 2.5757 37 1 1.9076 10.9643 1.7711 38 1 2.3513 8.6592 1.0304 39 1 1.4456 3.0090 -1.6589 40 1 2.5395 1.6578 -2.1870 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12525166_2989410.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:43:24 Heat of formation + Delta-G solvation = -39.280314 kcal Electronic energy + Delta-G solvation = -22277.554059 eV Core-core repulsion = 18765.902220 eV Total energy + Delta-G solvation = -3511.651839 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.107 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -41.66839 -40.99453 -39.52597 -38.67506 -37.29747 -34.50390 -32.43577 -31.82611 -30.03518 -29.77729 -26.94960 -26.50429 -25.96856 -24.03317 -22.46307 -21.82781 -20.81341 -19.52713 -18.62746 -18.45191 -17.81081 -17.48076 -17.13956 -16.89690 -16.75722 -15.96722 -15.76225 -15.61518 -15.50111 -15.32205 -14.89878 -14.60944 -14.45389 -14.20769 -14.12063 -13.98801 -13.86389 -13.71466 -13.49137 -13.40082 -12.63152 -12.49947 -12.21223 -11.97922 -11.92080 -11.73639 -11.71460 -11.00661 -10.91611 -10.51757 -10.30176 -10.02140 -9.19891 -8.70993 -5.01430 0.29671 0.32021 0.65359 1.25124 1.33209 1.38780 1.51487 1.55338 1.91822 2.46778 2.62757 3.18244 3.21332 3.31055 3.38131 3.55949 3.68118 3.74254 3.79295 3.82399 3.85136 3.91467 4.11732 4.14881 4.25816 4.33364 4.36175 4.46187 4.54067 4.58292 4.63040 4.65241 4.70037 4.75501 4.85157 4.96182 5.16377 5.25508 5.33552 5.52956 5.67871 6.15750 6.31629 6.42281 6.99820 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.250 6.250 3 C -0.086 4.086 4 H 0.104 0.896 5 C -0.115 4.115 6 C 0.125 3.875 7 H 0.114 0.886 8 N -0.712 5.712 9 C 0.519 3.481 10 O -0.507 6.507 11 C 0.040 3.960 12 O -0.288 6.288 13 C 0.133 3.867 14 C -0.145 4.145 15 C -0.050 4.050 16 C -0.110 4.110 17 C -0.071 4.071 18 O -0.536 6.536 19 Si 0.679 3.321 20 C -0.073 4.073 21 C -0.206 4.206 22 C -0.138 4.138 23 H 0.077 0.923 24 H 0.101 0.899 25 H 0.076 0.924 26 H 0.107 0.893 27 H 0.085 0.915 28 H 0.403 0.597 29 H 0.096 0.904 30 H 0.096 0.904 31 H 0.136 0.864 32 H 0.133 0.867 33 H 0.076 0.924 34 H 0.379 0.621 35 H -0.256 1.256 36 H -0.261 1.261 37 H 0.130 0.870 38 H 0.132 0.868 39 H 0.076 0.924 40 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.401 -0.017 3.799 6.603 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.022 6.022 3 C -0.215 4.215 4 H 0.122 0.878 5 C -0.155 4.155 6 C 0.018 3.982 7 H 0.132 0.868 8 N -0.366 5.366 9 C 0.304 3.696 10 O -0.380 6.380 11 C -0.039 4.039 12 O -0.200 6.200 13 C 0.088 3.912 14 C -0.164 4.164 15 C -0.068 4.068 16 C -0.110 4.110 17 C -0.181 4.181 18 O -0.344 6.344 19 Si 0.581 3.419 20 C -0.091 4.091 21 C -0.224 4.224 22 C -0.179 4.179 23 H 0.096 0.904 24 H 0.120 0.880 25 H 0.095 0.905 26 H 0.126 0.874 27 H 0.104 0.896 28 H 0.237 0.763 29 H 0.114 0.886 30 H 0.114 0.886 31 H 0.154 0.846 32 H 0.151 0.849 33 H 0.094 0.906 34 H 0.227 0.773 35 H -0.180 1.180 36 H -0.187 1.187 37 H 0.148 0.852 38 H 0.150 0.850 39 H 0.095 0.905 40 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges -3.971 -1.339 3.466 5.438 hybrid contribution -0.591 1.932 0.614 2.111 sum -4.562 0.593 4.080 6.149 Atomic orbital electron populations 1.23381 0.94035 1.06711 1.04967 1.86993 1.07652 1.09926 1.97619 1.24812 1.00793 0.94687 1.01216 0.87786 1.23179 0.93697 0.98087 1.00501 1.21823 0.98559 0.81294 0.96517 0.86810 1.45483 1.63629 1.04816 1.22675 1.20050 0.78895 0.84889 0.85773 1.90799 1.40323 1.87008 1.19888 1.22451 1.01975 0.85556 0.93869 1.86170 1.78051 1.11787 1.44014 1.19053 0.95233 0.83769 0.93170 1.20515 1.04563 0.90203 1.01073 1.20833 0.94827 0.95916 0.95192 1.19172 1.03218 0.93001 0.95654 1.24732 0.90653 0.91779 1.10945 1.86592 1.29769 1.28041 1.89974 0.95206 0.87439 0.83465 0.75834 1.20717 0.98134 0.91767 0.98464 1.21130 1.06293 0.98091 0.96924 1.23787 0.99103 0.99295 0.95728 0.90354 0.87993 0.90501 0.87426 0.89619 0.76284 0.88624 0.88585 0.84572 0.84864 0.90599 0.77271 1.18019 1.18668 0.85238 0.84990 0.90482 0.87507 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.22 10.76 101.05 1.09 1.31 16 2 S -0.25 -0.03 22.17 -107.50 -2.38 -2.41 16 3 C -0.09 0.19 4.15 -25.92 -0.11 0.08 16 4 H 0.10 -0.35 8.14 -51.93 -0.42 -0.78 16 5 C -0.12 0.30 7.42 -25.92 -0.19 0.11 16 6 C 0.13 -0.19 4.32 -67.12 -0.29 -0.48 16 7 H 0.11 0.04 7.46 -51.93 -0.39 -0.35 16 8 N -0.71 1.73 5.26 -53.02 -0.28 1.46 16 9 C 0.52 0.38 7.91 -10.99 -0.09 0.30 16 10 O -0.51 -2.98 16.10 -14.36 -0.23 -3.21 16 11 C 0.04 -0.06 5.22 36.00 0.19 0.13 16 12 O -0.29 -0.76 9.67 -39.34 -0.38 -1.14 16 13 C 0.13 0.25 6.69 -39.22 -0.26 -0.02 16 14 C -0.14 -0.30 9.99 -39.43 -0.39 -0.70 16 15 C -0.05 -0.08 9.60 -39.61 -0.38 -0.46 16 16 C -0.11 -0.13 5.42 -104.60 -0.57 -0.70 16 17 C -0.07 0.01 2.81 36.00 0.10 0.11 16 18 O -0.54 -0.63 12.74 -35.23 -0.45 -1.08 16 19 Si 0.68 -0.80 29.78 -169.99 -5.06 -5.86 16 20 C -0.07 -0.01 8.66 -39.60 -0.34 -0.35 16 21 C -0.21 0.03 9.04 -39.43 -0.36 -0.33 16 22 C -0.14 0.23 7.47 -25.91 -0.19 0.04 16 23 H 0.08 -0.17 8.14 -51.92 -0.42 -0.60 16 24 H 0.10 -0.21 8.14 -51.92 -0.42 -0.64 16 25 H 0.08 -0.20 8.14 -51.92 -0.42 -0.62 16 26 H 0.11 -0.22 8.10 -51.93 -0.42 -0.64 16 27 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 28 H 0.40 -2.25 8.70 -40.82 -0.36 -2.60 16 29 H 0.10 -0.37 7.66 -51.93 -0.40 -0.77 16 30 H 0.10 -0.40 7.66 -51.93 -0.40 -0.80 16 31 H 0.14 0.20 8.06 -52.49 -0.42 -0.22 16 32 H 0.13 0.07 8.06 -52.49 -0.42 -0.35 16 33 H 0.08 -0.14 7.96 -51.93 -0.41 -0.55 16 34 H 0.38 -1.06 8.74 45.56 0.40 -0.66 16 35 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 36 H -0.26 -0.25 7.11 56.52 0.40 0.16 16 37 H 0.13 -0.26 4.87 -52.49 -0.26 -0.51 16 38 H 0.13 -0.42 6.30 -52.49 -0.33 -0.75 16 39 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.11 -0.12 8.10 -51.93 -0.42 -0.54 16 LS Contribution 349.94 15.07 5.27 5.27 Total: 0.00 -9.61 349.94 -10.87 -20.48 By element: Atomic # 1 Polarization: -7.00 SS G_CDS: -5.56 Total: -12.56 kcal Atomic # 6 Polarization: 0.84 SS G_CDS: -1.80 Total: -0.95 kcal Atomic # 7 Polarization: 1.73 SS G_CDS: -0.28 Total: 1.46 kcal Atomic # 8 Polarization: -4.36 SS G_CDS: -1.06 Total: -5.42 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: -5.06 Total: -5.86 kcal Atomic # 16 Polarization: -0.03 SS G_CDS: -2.38 Total: -2.41 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -9.61 -10.87 -20.48 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525166_2989410.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.799 kcal (2) G-P(sol) polarization free energy of solvation -9.610 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.409 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.871 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.481 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.280 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds