Wall clock time and date at job start Sat Mar 6 2021 19:43:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81402 * 1 3 3 C 1.81397 * 102.99940 * 2 1 4 4 H 1.08996 * 112.85414 * 316.19186 * 3 2 1 5 5 C 1.54051 * 113.69781 * 87.46666 * 3 2 1 6 6 C 1.53783 * 86.98749 * 139.98637 * 5 3 2 7 7 H 1.09000 * 113.61663 * 219.98148 * 6 5 3 8 8 N 1.46502 * 113.61363 * 89.15994 * 6 5 3 9 9 C 1.34778 * 119.99802 * 105.86192 * 8 6 5 10 10 O 1.21276 * 120.00029 * 0.02562 * 9 8 6 11 11 C 1.50692 * 119.99924 * 179.97438 * 9 8 6 12 12 F 1.39899 * 109.47204 * 60.00337 * 11 9 8 13 13 F 1.39905 * 109.47432 * 300.00691 * 11 9 8 14 14 O 1.42900 * 109.47397 * 180.02562 * 11 9 8 15 15 C 1.35899 * 117.00511 * 180.02562 * 14 11 9 16 16 C 1.38726 * 120.05721 * 180.02562 * 15 14 11 17 17 C 1.38153 * 119.94564 * 180.02562 * 16 15 14 18 18 C 1.38269 * 120.05022 * 0.02562 * 17 16 15 19 19 C 1.50700 * 119.93900 * 179.97438 * 18 17 16 20 20 O 1.42896 * 109.47341 * 300.00123 * 19 18 17 21 21 Si 1.86300 * 109.46849 * 180.02562 * 19 18 17 22 22 C 1.38264 * 120.11486 * 0.25533 * 18 17 16 23 23 C 1.38143 * 120.05501 * 359.44957 * 22 18 17 24 24 C 1.53785 * 113.61098 * 185.00117 * 3 2 1 25 25 H 1.08996 * 109.47072 * 300.00058 * 1 2 3 26 26 H 1.09000 * 109.47027 * 60.00282 * 1 2 3 27 27 H 1.09001 * 109.46843 * 180.02562 * 1 2 3 28 28 H 1.09001 * 113.61319 * 25.48777 * 5 3 2 29 29 H 1.08993 * 113.69914 * 254.50398 * 5 3 2 30 30 H 0.96997 * 120.00147 * 285.86939 * 8 6 5 31 31 H 1.07999 * 120.03394 * 359.97438 * 16 15 14 32 32 H 1.07995 * 119.97802 * 179.97438 * 17 16 15 33 33 H 1.09000 * 109.46989 * 60.00454 * 19 18 17 34 34 H 0.96693 * 114.00306 * 299.99773 * 20 19 18 35 35 H 1.48506 * 110.00048 * 58.68772 * 21 19 18 36 36 H 1.48502 * 109.99996 * 180.02562 * 21 19 18 37 37 H 1.08002 * 119.97450 * 179.70367 * 22 18 17 38 38 H 1.08001 * 120.02763 * 180.30227 * 23 22 18 39 39 H 1.09002 * 113.61784 * 105.39038 * 24 3 2 40 40 H 1.09001 * 113.69549 * 334.49173 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2221 1.7675 0.0000 4 1 1.6110 2.3430 -0.6953 5 6 2.3006 2.3848 1.4092 6 6 3.5202 3.1752 0.9067 7 1 4.3239 3.2505 1.6392 8 7 3.1759 4.4659 0.3053 9 6 3.4207 5.6088 0.9764 10 8 3.9264 5.5687 2.0780 11 6 3.0670 6.9365 0.3576 12 9 1.6919 6.9814 0.1042 13 9 3.7677 7.0929 -0.8432 14 8 3.4208 7.9901 1.2558 15 6 3.1657 9.2609 0.8474 16 6 3.4843 10.3321 1.6693 17 6 3.2235 11.6230 1.2520 18 6 2.6448 11.8477 0.0165 19 6 2.3608 13.2569 -0.4360 20 8 1.4640 13.8812 0.4848 21 14 1.5855 13.2209 -2.1296 22 6 2.3210 10.7815 -0.8021 23 6 2.5854 9.4891 -0.3920 24 6 3.7284 2.0519 -0.1228 25 1 -0.3633 0.5138 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 2.5399 1.6624 2.1896 29 1 1.4463 3.0133 1.6604 30 1 2.7716 4.4980 -0.5759 31 1 3.9351 10.1571 2.6349 32 1 3.4709 12.4573 1.8916 33 1 3.2928 13.8208 -0.4746 34 1 0.6121 13.4319 0.5701 35 1 0.3301 12.4282 -2.0967 36 1 1.3011 14.6046 -2.5875 37 1 1.8647 10.9594 -1.7647 38 1 2.3368 8.6569 -1.0339 39 1 4.0259 2.4120 -1.1077 40 1 4.3585 1.2394 0.2389 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12525166_4549640.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:43:53 Heat of formation + Delta-G solvation = -133.581049 kcal Electronic energy + Delta-G solvation = -27996.041879 eV Core-core repulsion = 23541.392902 eV Total energy + Delta-G solvation = -4454.648977 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.088 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -50.87203 -48.84731 -41.64761 -41.29695 -39.71574 -39.10964 -37.35881 -34.85413 -32.44443 -32.02257 -30.02991 -29.27131 -27.07068 -26.76927 -25.99612 -24.48151 -22.94099 -22.45669 -21.09820 -20.64965 -19.80701 -19.66112 -18.68328 -18.10193 -17.50397 -17.26972 -17.01329 -16.71312 -16.41744 -16.25193 -15.99036 -15.76936 -15.72856 -15.51210 -15.41298 -15.31655 -15.09682 -15.06843 -14.66970 -14.38523 -14.35995 -14.26256 -14.18710 -13.92447 -13.80817 -13.51600 -13.00851 -12.75959 -12.39444 -12.25679 -12.12299 -11.86209 -11.75356 -11.55323 -11.00863 -10.67132 -10.64706 -10.17475 -9.55927 -8.75848 -5.01099 0.04524 0.16462 0.42467 0.59765 0.64045 1.22958 1.44815 1.54516 1.70454 1.91876 1.96145 2.46751 2.65805 3.02912 3.09047 3.23743 3.30731 3.40727 3.51959 3.62923 3.64637 3.71148 4.07978 4.09123 4.11997 4.18572 4.19776 4.38422 4.39137 4.41856 4.44217 4.52479 4.61763 4.67360 4.69611 4.80484 4.91566 5.05233 5.06210 5.34580 5.38422 5.68542 5.85823 6.33103 6.35115 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 S -0.245 6.245 3 C -0.090 4.090 4 H 0.105 0.895 5 C -0.137 4.137 6 C 0.121 3.879 7 H 0.120 0.880 8 N -0.689 5.689 9 C 0.520 3.480 10 O -0.463 6.463 11 C 0.433 3.567 12 F -0.175 7.175 13 F -0.173 7.173 14 O -0.286 6.286 15 C 0.107 3.893 16 C -0.126 4.126 17 C -0.056 4.056 18 C -0.140 4.140 19 C -0.072 4.072 20 O -0.529 6.529 21 Si 0.682 3.318 22 C -0.077 4.077 23 C -0.187 4.187 24 C -0.113 4.113 25 H 0.078 0.922 26 H 0.077 0.923 27 H 0.102 0.898 28 H 0.111 0.889 29 H 0.079 0.921 30 H 0.410 0.590 31 H 0.141 0.859 32 H 0.140 0.860 33 H 0.121 0.879 34 H 0.376 0.624 35 H -0.260 1.260 36 H -0.255 1.255 37 H 0.135 0.865 38 H 0.136 0.864 39 H 0.089 0.911 40 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.760 -2.252 -3.507 4.236 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.292 4.292 2 S -0.017 6.017 3 C -0.219 4.219 4 H 0.124 0.876 5 C -0.178 4.178 6 C 0.015 3.985 7 H 0.138 0.862 8 N -0.343 5.343 9 C 0.298 3.702 10 O -0.332 6.332 11 C 0.355 3.645 12 F -0.157 7.157 13 F -0.155 7.155 14 O -0.202 6.202 15 C 0.064 3.936 16 C -0.144 4.144 17 C -0.074 4.074 18 C -0.141 4.141 19 C -0.181 4.181 20 O -0.335 6.335 21 Si 0.583 3.417 22 C -0.094 4.094 23 C -0.205 4.205 24 C -0.152 4.152 25 H 0.097 0.903 26 H 0.096 0.904 27 H 0.121 0.879 28 H 0.130 0.870 29 H 0.098 0.902 30 H 0.246 0.754 31 H 0.159 0.841 32 H 0.158 0.842 33 H 0.139 0.861 34 H 0.224 0.776 35 H -0.184 1.184 36 H -0.180 1.180 37 H 0.152 0.848 38 H 0.154 0.846 39 H 0.107 0.893 40 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 0.135 -2.633 -2.985 3.982 hybrid contribution -2.160 0.978 0.000 2.371 sum -2.025 -1.655 -2.985 3.968 Atomic orbital electron populations 1.23395 0.93960 1.06782 1.05048 1.86979 1.07724 1.09382 1.97586 1.24876 1.00740 0.95159 1.01086 0.87638 1.23855 0.98709 0.99210 0.96027 1.22028 0.99161 0.80354 0.96972 0.86210 1.45468 1.62801 1.04573 1.21448 1.19286 0.80999 0.83449 0.86515 1.90886 1.39316 1.85259 1.17780 1.21783 0.74725 0.90563 0.77460 1.93194 1.31731 1.96726 1.94004 1.93202 1.78683 1.96050 1.47528 1.86670 1.78763 1.12847 1.41917 1.18983 0.97881 0.82434 0.94334 1.20544 1.03414 0.89917 1.00561 1.20904 0.95366 0.95871 0.95229 1.20325 1.02119 0.95638 0.95997 1.24987 0.98451 0.91505 1.03197 1.86603 1.29040 1.55010 1.62882 0.95052 0.84951 0.82078 0.79640 1.20804 0.98200 0.91444 0.98999 1.21464 1.04040 0.99111 0.95908 1.23176 0.93939 0.97640 1.00434 0.90318 0.90431 0.87920 0.87021 0.90201 0.75401 0.84100 0.84195 0.86142 0.77584 1.18440 1.18022 0.84806 0.84647 0.89279 0.86914 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.25 10.76 101.05 1.09 1.34 16 2 S -0.25 0.10 22.19 -107.50 -2.38 -2.28 16 3 C -0.09 0.24 4.16 -25.77 -0.11 0.13 16 4 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 5 C -0.14 0.34 7.49 -25.78 -0.19 0.15 16 6 C 0.12 -0.29 4.30 -67.11 -0.29 -0.58 16 7 H 0.12 -0.17 7.50 -51.93 -0.39 -0.56 16 8 N -0.69 1.49 5.26 -53.01 -0.28 1.21 16 9 C 0.52 0.54 7.34 -10.99 -0.08 0.46 16 10 O -0.46 -2.03 16.12 -14.35 -0.23 -2.26 16 11 C 0.43 0.48 2.05 36.00 0.07 0.55 16 12 F -0.18 -0.09 15.29 2.25 0.03 -0.05 16 13 F -0.17 -0.06 15.30 2.25 0.03 -0.03 16 14 O -0.29 -0.89 9.60 -39.33 -0.38 -1.27 16 15 C 0.11 0.24 6.48 -39.22 -0.25 -0.01 16 16 C -0.13 -0.16 9.99 -39.43 -0.39 -0.55 16 17 C -0.06 -0.02 9.61 -39.60 -0.38 -0.40 16 18 C -0.14 -0.01 5.39 -104.60 -0.56 -0.57 16 19 C -0.07 0.04 2.82 36.01 0.10 0.14 16 20 O -0.53 -0.45 12.76 -35.23 -0.45 -0.90 16 21 Si 0.68 -0.82 29.78 -169.99 -5.06 -5.89 16 22 C -0.08 0.00 8.66 -39.61 -0.34 -0.34 16 23 C -0.19 -0.20 8.26 -39.43 -0.33 -0.53 16 24 C -0.11 0.38 7.41 -25.91 -0.19 0.19 16 25 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 26 H 0.08 -0.21 8.14 -51.92 -0.42 -0.63 16 27 H 0.10 -0.24 8.14 -51.92 -0.42 -0.66 16 28 H 0.11 -0.25 8.11 -51.93 -0.42 -0.68 16 29 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 30 H 0.41 -1.83 8.70 -40.82 -0.36 -2.19 16 31 H 0.14 0.02 8.06 -52.49 -0.42 -0.40 16 32 H 0.14 -0.11 8.06 -52.49 -0.42 -0.53 16 33 H 0.12 -0.17 7.96 -51.93 -0.41 -0.58 16 34 H 0.38 -0.69 8.70 45.56 0.40 -0.30 16 35 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 36 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 37 H 0.13 -0.27 4.87 -52.49 -0.26 -0.53 16 38 H 0.14 0.02 5.10 -52.49 -0.27 -0.24 16 39 H 0.09 -0.37 8.14 -51.93 -0.42 -0.80 16 40 H 0.11 -0.36 8.10 -51.93 -0.42 -0.78 16 LS Contribution 359.24 15.07 5.41 5.41 Total: 0.00 -7.02 359.24 -9.87 -16.89 By element: Atomic # 1 Polarization: -6.11 SS G_CDS: -4.71 Total: -10.81 kcal Atomic # 6 Polarization: 1.84 SS G_CDS: -1.86 Total: -0.02 kcal Atomic # 7 Polarization: 1.49 SS G_CDS: -0.28 Total: 1.21 kcal Atomic # 8 Polarization: -3.36 SS G_CDS: -1.06 Total: -4.42 kcal Atomic # 9 Polarization: -0.15 SS G_CDS: 0.07 Total: -0.08 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: -5.06 Total: -5.89 kcal Atomic # 16 Polarization: 0.10 SS G_CDS: -2.38 Total: -2.28 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -7.02 -9.87 -16.89 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525166_4549640.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -116.693 kcal (2) G-P(sol) polarization free energy of solvation -7.018 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.711 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.870 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.888 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.581 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds