Wall clock time and date at job start Sat Mar 6 2021 19:43:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81400 * 1 3 3 C 1.81396 * 103.00067 * 2 1 4 4 H 1.09000 * 112.90991 * 43.75060 * 3 2 1 5 5 C 1.53786 * 113.61571 * 174.99869 * 3 2 1 6 6 C 1.53781 * 87.17350 * 140.02404 * 5 3 2 7 7 H 1.09000 * 113.61379 * 219.89528 * 6 5 3 8 8 N 1.46505 * 113.61334 * 89.07333 * 6 5 3 9 9 C 1.34776 * 119.99597 * 154.99978 * 8 6 5 10 10 O 1.21275 * 120.00338 * 0.02562 * 9 8 6 11 11 C 1.50705 * 119.99715 * 180.02562 * 9 8 6 12 12 O 1.42901 * 109.46987 * 180.02562 * 11 9 8 13 13 C 1.35901 * 116.99924 * 180.02562 * 12 11 9 14 14 C 1.38711 * 120.05655 * 179.72637 * 13 12 11 15 15 C 1.38162 * 119.94263 * 179.67258 * 14 13 12 16 16 C 1.50708 * 119.96982 * 180.31497 * 15 14 13 17 17 O 1.42893 * 109.47094 * 300.29934 * 16 15 14 18 18 Si 1.86302 * 109.46843 * 180.30261 * 16 15 14 19 19 C 1.38236 * 120.05635 * 0.61938 * 15 14 13 20 20 C 1.38292 * 120.11436 * 359.67420 * 19 15 14 21 21 C 1.38125 * 120.04978 * 0.02562 * 20 19 15 22 22 C 1.53781 * 87.08070 * 334.52830 * 6 5 3 23 23 H 1.09004 * 109.46830 * 59.99795 * 1 2 3 24 24 H 1.08999 * 109.47388 * 180.02562 * 1 2 3 25 25 H 1.09000 * 109.46955 * 300.00272 * 1 2 3 26 26 H 1.09002 * 113.61357 * 25.43320 * 5 3 2 27 27 H 1.09002 * 113.61608 * 254.61482 * 5 3 2 28 28 H 0.96995 * 120.00170 * 335.00476 * 8 6 5 29 29 H 1.09000 * 109.46532 * 299.99611 * 11 9 8 30 30 H 1.08993 * 109.47264 * 60.00029 * 11 9 8 31 31 H 1.08002 * 120.02341 * 359.97438 * 14 13 12 32 32 H 1.08999 * 109.46648 * 60.30427 * 16 15 14 33 33 H 0.96702 * 114.00343 * 300.00258 * 17 16 15 34 34 H 1.48494 * 110.00109 * 180.02562 * 18 16 15 35 35 H 1.48501 * 110.00013 * 301.31931 * 18 16 15 36 36 H 1.08005 * 119.94639 * 179.69690 * 19 15 14 37 37 H 1.07998 * 119.97612 * 180.02562 * 20 19 15 38 38 H 1.08000 * 120.02558 * 180.02562 * 21 20 19 39 39 H 1.09005 * 113.61471 * 139.98321 * 22 6 5 40 40 H 1.09003 * 113.61469 * 270.88099 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2221 1.7675 0.0000 4 1 1.6109 2.3441 0.6943 5 6 3.7284 2.0520 0.1228 6 6 3.5229 3.1750 -0.9074 7 1 4.3278 3.2495 -1.6386 8 7 3.1783 4.4663 -0.3070 9 6 3.4534 5.6100 -0.9648 10 8 3.9855 5.5703 -2.0538 11 6 3.0995 6.9383 -0.3470 12 8 3.4872 7.9927 -1.2301 13 6 3.2373 9.2641 -0.8201 14 6 3.5928 10.3362 -1.6252 15 6 3.3315 11.6275 -1.2091 16 6 3.7110 12.7926 -2.0866 17 8 5.1213 12.7764 -2.3162 18 14 3.2373 14.3850 -1.2436 19 6 2.7281 11.8520 0.0142 20 6 2.3783 10.7851 0.8215 21 6 2.6317 9.4921 0.4073 22 6 2.3033 2.3842 -1.4093 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3634 -1.0276 0.0005 25 1 -0.3633 0.5139 0.8900 26 1 4.3573 1.2381 -0.2381 27 1 4.0259 2.4120 1.1077 28 1 2.7524 4.4980 0.5639 29 1 2.0239 6.9846 -0.1765 30 1 3.6230 7.0483 0.6027 31 1 4.0689 10.1615 -2.5788 32 1 3.1868 12.7158 -3.0391 33 1 5.6518 12.8415 -1.5103 34 1 3.6057 15.5416 -2.0989 35 1 1.7777 14.4004 -0.9705 36 1 2.5292 12.8624 0.3399 37 1 1.9066 10.9631 1.7766 38 1 2.3580 8.6591 1.0379 39 1 1.4488 3.0125 -1.6610 40 1 2.5425 1.6611 -2.1892 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12525166_4860298.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:43:59 Heat of formation + Delta-G solvation = -40.700155 kcal Electronic energy + Delta-G solvation = -22359.300143 eV Core-core repulsion = 18847.586735 eV Total energy + Delta-G solvation = -3511.713408 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.107 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.69838 -41.03571 -39.56200 -38.67872 -37.22455 -34.51785 -32.51295 -31.72117 -30.01125 -29.49882 -26.95613 -26.91002 -26.14681 -23.71896 -22.91326 -21.74838 -20.82099 -19.40706 -18.68445 -17.84665 -17.70693 -17.51251 -17.22883 -16.97985 -16.78687 -16.15904 -15.91420 -15.68032 -15.41997 -15.29278 -14.97905 -14.69669 -14.60859 -14.21719 -14.18892 -14.03016 -13.88601 -13.72046 -13.45257 -12.99712 -12.65236 -12.60110 -12.23279 -11.98115 -11.96586 -11.73006 -11.69133 -11.02314 -10.93082 -10.51681 -10.31803 -9.95664 -9.31834 -8.72017 -5.04805 0.15316 0.35407 0.64277 1.22120 1.35193 1.36934 1.50383 1.62049 1.95865 2.44563 2.62433 3.16214 3.20362 3.34125 3.45756 3.54357 3.59544 3.68143 3.73110 3.81826 3.82523 3.95923 4.10592 4.13816 4.14103 4.31708 4.32953 4.50264 4.52892 4.55248 4.58200 4.61822 4.68966 4.74190 4.83796 4.92351 5.18222 5.30114 5.31780 5.39321 5.59690 6.13875 6.29789 6.56845 6.98075 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 S -0.249 6.249 3 C -0.087 4.087 4 H 0.104 0.896 5 C -0.115 4.115 6 C 0.125 3.875 7 H 0.114 0.886 8 N -0.712 5.712 9 C 0.519 3.481 10 O -0.506 6.506 11 C 0.041 3.959 12 O -0.288 6.288 13 C 0.129 3.871 14 C -0.120 4.120 15 C -0.079 4.079 16 C -0.071 4.071 17 O -0.538 6.538 18 Si 0.694 3.306 19 C -0.154 4.154 20 C -0.073 4.073 21 C -0.207 4.207 22 C -0.138 4.138 23 H 0.077 0.923 24 H 0.102 0.898 25 H 0.076 0.924 26 H 0.108 0.892 27 H 0.085 0.915 28 H 0.402 0.598 29 H 0.095 0.905 30 H 0.096 0.904 31 H 0.137 0.863 32 H 0.116 0.884 33 H 0.380 0.620 34 H -0.254 1.254 35 H -0.258 1.258 36 H 0.129 0.871 37 H 0.131 0.869 38 H 0.129 0.871 39 H 0.076 0.924 40 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.475 0.086 7.271 7.681 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.021 6.021 3 C -0.216 4.216 4 H 0.122 0.878 5 C -0.154 4.154 6 C 0.018 3.982 7 H 0.132 0.868 8 N -0.366 5.366 9 C 0.304 3.696 10 O -0.379 6.379 11 C -0.038 4.038 12 O -0.200 6.200 13 C 0.084 3.916 14 C -0.139 4.139 15 C -0.080 4.080 16 C -0.182 4.182 17 O -0.343 6.343 18 Si 0.596 3.404 19 C -0.172 4.172 20 C -0.091 4.091 21 C -0.225 4.225 22 C -0.179 4.179 23 H 0.096 0.904 24 H 0.120 0.880 25 H 0.095 0.905 26 H 0.126 0.874 27 H 0.104 0.896 28 H 0.237 0.763 29 H 0.112 0.888 30 H 0.114 0.886 31 H 0.154 0.846 32 H 0.133 0.867 33 H 0.227 0.773 34 H -0.180 1.180 35 H -0.183 1.183 36 H 0.147 0.853 37 H 0.149 0.851 38 H 0.147 0.853 39 H 0.095 0.905 40 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges -2.013 -0.220 5.627 5.980 hybrid contribution -1.579 0.324 0.444 1.672 sum -3.591 0.104 6.071 7.055 Atomic orbital electron populations 1.23382 0.94056 1.06721 1.04958 1.86984 1.07629 1.09848 1.97606 1.24854 1.00797 0.94714 1.01203 0.87812 1.23173 0.93684 0.98073 1.00497 1.21823 0.98573 0.81287 0.96513 0.86786 1.45485 1.63560 1.04816 1.22745 1.20044 0.78931 0.84878 0.85788 1.90801 1.40268 1.86995 1.19870 1.22443 1.01859 0.85577 0.93876 1.86175 1.78127 1.11750 1.43990 1.19039 0.95548 0.83790 0.93264 1.20276 1.03202 0.89412 1.01021 1.20168 0.98090 0.94599 0.95127 1.25139 0.85836 1.04015 1.03168 1.86523 1.14869 1.96798 1.36111 0.94641 0.82807 0.75911 0.87012 1.20953 1.02489 0.99127 0.94615 1.20909 0.97308 0.91503 0.99339 1.21289 1.05844 0.98672 0.96729 1.23835 0.99079 0.99282 0.95727 0.90368 0.87974 0.90509 0.87412 0.89622 0.76304 0.88766 0.88592 0.84554 0.86660 0.77297 1.17950 1.18289 0.85324 0.85071 0.85271 0.90523 0.87500 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.21 10.76 101.05 1.09 1.30 16 2 S -0.25 -0.04 22.18 -107.50 -2.38 -2.42 16 3 C -0.09 0.19 4.17 -25.77 -0.11 0.08 16 4 H 0.10 -0.34 8.14 -51.93 -0.42 -0.77 16 5 C -0.11 0.30 7.41 -25.92 -0.19 0.11 16 6 C 0.13 -0.19 4.32 -67.11 -0.29 -0.48 16 7 H 0.11 0.04 7.46 -51.93 -0.39 -0.35 16 8 N -0.71 1.70 5.26 -53.01 -0.28 1.42 16 9 C 0.52 0.43 7.91 -10.98 -0.09 0.34 16 10 O -0.51 -3.04 16.10 -14.35 -0.23 -3.28 16 11 C 0.04 -0.06 5.22 36.01 0.19 0.13 16 12 O -0.29 -0.79 9.67 -39.34 -0.38 -1.17 16 13 C 0.13 0.22 6.69 -39.22 -0.26 -0.04 16 14 C -0.12 -0.26 9.55 -39.43 -0.38 -0.64 16 15 C -0.08 -0.05 5.39 -104.65 -0.56 -0.61 16 16 C -0.07 -0.01 2.82 36.01 0.10 0.09 16 17 O -0.54 -0.42 12.76 -35.23 -0.45 -0.86 16 18 Si 0.69 -0.76 29.79 -169.99 -5.06 -5.82 16 19 C -0.15 0.10 8.67 -39.56 -0.34 -0.24 16 20 C -0.07 0.08 10.04 -39.60 -0.40 -0.31 16 21 C -0.21 0.14 9.04 -39.43 -0.36 -0.22 16 22 C -0.14 0.22 7.48 -25.78 -0.19 0.03 16 23 H 0.08 -0.16 8.14 -51.92 -0.42 -0.59 16 24 H 0.10 -0.21 8.14 -51.92 -0.42 -0.63 16 25 H 0.08 -0.19 8.14 -51.92 -0.42 -0.61 16 26 H 0.11 -0.22 8.10 -51.93 -0.42 -0.65 16 27 H 0.09 -0.30 8.14 -51.93 -0.42 -0.73 16 28 H 0.40 -2.23 8.70 -40.82 -0.36 -2.59 16 29 H 0.09 -0.37 7.66 -51.93 -0.40 -0.77 16 30 H 0.10 -0.39 7.66 -51.93 -0.40 -0.79 16 31 H 0.14 0.40 8.06 -52.49 -0.42 -0.02 16 32 H 0.12 0.08 7.96 -51.93 -0.41 -0.33 16 33 H 0.38 -1.22 8.70 45.56 0.40 -0.83 16 34 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 35 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 36 H 0.13 -0.32 4.87 -52.48 -0.26 -0.58 16 37 H 0.13 -0.46 8.06 -52.49 -0.42 -0.88 16 38 H 0.13 -0.44 6.30 -52.49 -0.33 -0.77 16 39 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 40 H 0.11 -0.11 8.11 -51.93 -0.42 -0.53 16 LS Contribution 349.93 15.07 5.27 5.27 Total: 0.00 -9.42 349.93 -10.87 -20.29 By element: Atomic # 1 Polarization: -7.39 SS G_CDS: -5.56 Total: -12.95 kcal Atomic # 6 Polarization: 1.31 SS G_CDS: -1.79 Total: -0.48 kcal Atomic # 7 Polarization: 1.70 SS G_CDS: -0.28 Total: 1.42 kcal Atomic # 8 Polarization: -4.25 SS G_CDS: -1.06 Total: -5.31 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: -5.06 Total: -5.82 kcal Atomic # 16 Polarization: -0.04 SS G_CDS: -2.38 Total: -2.42 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -9.42 -10.87 -20.29 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525166_4860298.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.412 kcal (2) G-P(sol) polarization free energy of solvation -9.418 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.830 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.870 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.289 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.700 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds