Wall clock time and date at job start Sat Mar 6 2021 19:44:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81397 * 1 3 3 C 1.81405 * 102.99694 * 2 1 4 4 H 1.08994 * 112.84885 * 316.19124 * 3 2 1 5 5 C 1.54043 * 113.62004 * 87.50389 * 3 2 1 6 6 C 1.53787 * 86.98568 * 139.97785 * 5 3 2 7 7 H 1.08999 * 113.61015 * 219.98146 * 6 5 3 8 8 N 1.46495 * 113.61411 * 89.16197 * 6 5 3 9 9 C 1.34777 * 120.00330 * 105.86125 * 8 6 5 10 10 O 1.21694 * 119.99802 * 5.13274 * 9 8 6 11 11 C 1.46674 * 120.00091 * 185.12349 * 9 8 6 12 12 C 1.37877 * 126.22568 * 355.59465 * 11 9 8 13 13 C 1.39879 * 107.09384 * 179.97438 * 12 11 9 14 14 Br 1.89098 * 126.07796 * 179.97438 * 13 12 11 15 15 C 1.35512 * 107.85015 * 359.97438 * 13 12 11 16 16 C 1.50701 * 125.56978 * 179.97438 * 15 13 12 17 17 O 1.42894 * 109.47126 * 113.70051 * 16 15 13 18 18 Si 1.86305 * 109.46979 * 233.70123 * 16 15 13 19 19 N 1.35600 * 108.85382 * 0.02562 * 15 13 12 20 20 C 1.46504 * 125.67011 * 179.73596 * 19 15 13 21 21 C 1.53778 * 113.60961 * 184.99990 * 3 2 1 22 22 H 1.09007 * 109.46762 * 180.02562 * 1 2 3 23 23 H 1.08997 * 109.47492 * 299.99720 * 1 2 3 24 24 H 1.09001 * 109.47172 * 60.00693 * 1 2 3 25 25 H 1.09003 * 113.61518 * 25.47367 * 5 3 2 26 26 H 1.09005 * 113.69863 * 254.49466 * 5 3 2 27 27 H 0.97006 * 120.00001 * 285.86234 * 8 6 5 28 28 H 1.08005 * 126.45442 * 0.02562 * 12 11 9 29 29 H 1.09002 * 109.46804 * 353.69869 * 16 15 13 30 30 H 0.96702 * 114.00296 * 60.00228 * 17 16 15 31 31 H 1.48503 * 110.00092 * 63.72408 * 18 16 15 32 32 H 1.48496 * 109.99780 * 185.04683 * 18 16 15 33 33 H 1.09008 * 109.47160 * 94.98207 * 20 19 15 34 34 H 1.09001 * 109.47013 * 214.98046 * 20 19 15 35 35 H 1.09000 * 109.47330 * 334.98366 * 20 19 15 36 36 H 1.08998 * 113.61678 * 105.47130 * 21 3 2 37 37 H 1.09002 * 113.69624 * 334.57344 * 21 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2220 1.7676 0.0000 4 1 1.6109 2.3430 -0.6953 5 6 2.3009 2.3828 1.4100 6 6 3.5205 3.1739 0.9083 7 1 4.3242 3.2481 1.6408 8 7 3.1760 4.4655 0.3089 9 6 3.4210 5.6074 0.9815 10 8 4.0125 5.5725 2.0445 11 6 2.9750 6.8922 0.4323 12 6 2.3741 7.0901 -0.7928 13 6 2.1172 8.4603 -0.9082 14 35 1.3029 9.3203 -2.3823 15 6 2.5557 9.0619 0.2242 16 6 2.4756 10.5374 0.5203 17 8 1.5779 10.7563 1.6103 18 14 4.1676 11.1728 0.9721 19 7 3.0793 8.1195 1.0466 20 6 3.6640 8.3673 2.3668 21 6 3.7282 2.0520 -0.1228 22 1 -0.3633 -1.0278 0.0005 23 1 -0.3634 0.5138 0.8900 24 1 -0.3633 0.5137 -0.8900 25 1 2.5403 1.6593 2.1894 26 1 1.4466 3.0110 1.6624 27 1 2.7715 4.4989 -0.5722 28 1 2.1443 6.3302 -1.5250 29 1 2.1125 11.0657 -0.3612 30 1 1.8391 10.3146 2.4299 31 1 5.0882 11.0330 -0.1848 32 1 4.0820 12.5969 1.3839 33 1 2.9073 8.2081 3.1351 34 1 4.4966 7.6829 2.5297 35 1 4.0232 9.3951 2.4180 36 1 4.0255 2.4134 -1.1072 37 1 4.3584 1.2389 0.2377 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12525166_5000100.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:44:07 Heat of formation + Delta-G solvation = 22.836080 kcal Electronic energy + Delta-G solvation = -22099.361567 eV Core-core repulsion = 18632.067715 eV Total energy + Delta-G solvation = -3467.293851 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.013 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -42.92117 -41.01293 -39.07541 -37.88816 -34.96155 -34.12203 -32.10059 -30.96031 -29.82508 -27.60443 -27.36563 -26.78507 -25.78492 -23.34338 -21.86648 -20.84052 -20.45342 -19.06144 -18.14462 -17.79470 -17.19582 -17.02050 -16.74086 -16.08550 -16.06389 -15.66203 -15.37429 -15.13360 -14.68067 -14.45133 -14.40966 -14.37274 -14.25184 -14.03849 -13.72954 -13.64011 -13.53376 -13.22752 -12.93613 -12.51009 -12.39748 -11.94790 -11.81077 -11.59229 -11.37976 -11.12579 -10.84281 -10.83068 -10.25096 -9.82316 -9.32531 -8.68329 -5.20537 0.11547 0.60286 0.77927 0.89659 1.15102 1.38196 1.52354 1.63612 1.81776 2.12171 2.20309 3.17542 3.33390 3.38431 3.41349 3.48663 3.68776 3.75051 3.88859 3.94762 4.24330 4.30852 4.31861 4.32355 4.39184 4.48488 4.61398 4.67578 4.71192 4.74137 4.82478 4.87239 4.91840 5.00024 5.22124 5.46281 5.54456 5.80706 6.35082 6.44488 7.01129 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 S -0.302 6.302 3 C -0.073 4.073 4 H 0.117 0.883 5 C -0.134 4.134 6 C 0.129 3.871 7 H 0.103 0.897 8 N -0.689 5.689 9 C 0.598 3.402 10 O -0.565 6.565 11 C -0.042 4.042 12 C -0.106 4.106 13 C -0.180 4.180 14 Br -0.029 7.029 15 C 0.049 3.951 16 C -0.054 4.054 17 O -0.541 6.541 18 Si 0.745 3.255 19 N -0.393 5.393 20 C 0.053 3.947 21 C -0.108 4.108 22 H 0.103 0.897 23 H 0.082 0.918 24 H 0.085 0.915 25 H 0.102 0.898 26 H 0.075 0.925 27 H 0.416 0.584 28 H 0.176 0.824 29 H 0.125 0.875 30 H 0.391 0.609 31 H -0.283 1.283 32 H -0.266 1.266 33 H 0.111 0.889 34 H 0.111 0.889 35 H 0.108 0.892 36 H 0.098 0.902 37 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.228 -1.405 1.607 2.147 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.282 4.282 2 S -0.074 6.074 3 C -0.201 4.201 4 H 0.135 0.865 5 C -0.175 4.175 6 C 0.021 3.979 7 H 0.121 0.879 8 N -0.341 5.341 9 C 0.386 3.614 10 O -0.445 6.445 11 C -0.156 4.156 12 C -0.133 4.133 13 C -0.266 4.266 14 Br 0.055 6.945 15 C -0.073 4.073 16 C -0.164 4.164 17 O -0.347 6.347 18 Si 0.646 3.354 19 N -0.067 5.067 20 C -0.085 4.085 21 C -0.147 4.147 22 H 0.122 0.878 23 H 0.101 0.899 24 H 0.104 0.896 25 H 0.120 0.880 26 H 0.093 0.907 27 H 0.253 0.747 28 H 0.194 0.806 29 H 0.142 0.858 30 H 0.240 0.760 31 H -0.209 1.209 32 H -0.191 1.191 33 H 0.129 0.871 34 H 0.130 0.870 35 H 0.126 0.874 36 H 0.116 0.884 37 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges 1.452 -1.089 1.568 2.399 hybrid contribution -1.533 0.737 -0.815 1.886 sum -0.081 -0.352 0.753 0.836 Atomic orbital electron populations 1.23386 0.92135 1.07052 1.05629 1.87135 1.09955 1.12612 1.97720 1.24882 1.01223 0.92774 1.01259 0.86485 1.23781 0.98852 0.99010 0.95821 1.21759 0.98201 0.81212 0.96687 0.87913 1.45198 1.63276 1.04042 1.21540 1.16837 0.78149 0.82771 0.83625 1.90815 1.42691 1.87415 1.23559 1.19974 1.13302 0.86511 0.95839 1.21494 1.00809 0.94847 0.96172 1.20988 1.13466 0.95934 0.96238 1.96664 1.80296 1.78837 1.38707 1.20812 1.02024 0.92843 0.91597 1.24953 1.07305 0.90015 0.94123 1.86592 1.51045 1.75426 1.21669 0.94457 0.72616 0.81601 0.86745 1.43892 1.42576 1.04626 1.15571 1.22800 1.01971 1.03752 0.79965 1.23137 0.93356 0.97405 1.00835 0.87847 0.89887 0.89644 0.87972 0.90677 0.74688 0.80637 0.85816 0.75977 1.20945 1.19118 0.87065 0.87012 0.87444 0.88399 0.87685 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.40 10.76 113.37 1.22 1.62 16 2 S -0.30 -0.12 22.18 -56.49 -1.25 -1.37 16 3 C -0.07 0.35 4.17 31.21 0.13 0.48 16 4 H 0.12 -0.84 8.14 -2.39 -0.02 -0.86 16 5 C -0.13 0.55 7.49 31.21 0.23 0.78 16 6 C 0.13 -0.54 4.33 45.52 0.20 -0.34 16 7 H 0.10 -0.11 7.45 -2.39 -0.02 -0.13 16 8 N -0.69 3.24 5.25 -444.00 -2.33 0.91 16 9 C 0.60 0.28 7.77 86.45 0.67 0.96 16 10 O -0.56 -3.23 14.35 -4.33 -0.06 -3.29 16 11 C -0.04 0.00 6.89 40.35 0.28 0.28 16 12 C -0.11 0.08 10.34 22.58 0.23 0.31 16 13 C -0.18 -0.48 6.53 22.04 0.14 -0.34 16 14 Br -0.03 -0.10 33.07 -20.37 -0.67 -0.78 16 15 C 0.05 0.05 5.32 41.35 0.22 0.27 16 16 C -0.05 0.00 2.87 71.24 0.20 0.20 16 17 O -0.54 0.24 12.88 -148.98 -1.92 -1.68 16 18 Si 0.74 -1.66 29.11 68.60 2.00 0.33 16 19 N -0.39 0.51 3.10 -519.59 -1.61 -1.10 16 20 C 0.05 -0.39 9.02 127.77 1.15 0.76 16 21 C -0.11 0.64 7.41 31.12 0.23 0.87 16 22 H 0.10 -0.41 8.14 -2.39 -0.02 -0.43 16 23 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 24 H 0.08 -0.44 8.14 -2.39 -0.02 -0.46 16 25 H 0.10 -0.29 8.10 -2.39 -0.02 -0.31 16 26 H 0.07 -0.25 8.14 -2.38 -0.02 -0.27 16 27 H 0.42 -3.85 7.60 -92.70 -0.70 -4.55 16 28 H 0.18 -1.11 7.45 -2.91 -0.02 -1.13 16 29 H 0.12 0.29 6.97 -2.39 -0.02 0.27 16 30 H 0.39 -3.47 7.66 -74.06 -0.57 -4.03 16 31 H -0.28 -1.27 7.11 99.48 0.71 -0.57 16 32 H -0.27 -0.75 7.11 99.48 0.71 -0.05 16 33 H 0.11 -1.16 8.14 -2.38 -0.02 -1.18 16 34 H 0.11 -0.56 6.51 -2.39 -0.02 -0.57 16 35 H 0.11 -1.33 3.71 -2.39 -0.01 -1.34 16 36 H 0.10 -0.78 8.14 -2.39 -0.02 -0.80 16 37 H 0.10 -0.50 8.10 -2.39 -0.02 -0.52 16 Total: 0.00 -17.40 337.57 -1.05 -18.45 By element: Atomic # 1 Polarization: -17.20 SS G_CDS: -0.11 Total: -17.32 kcal Atomic # 6 Polarization: 0.93 SS G_CDS: 4.91 Total: 5.85 kcal Atomic # 7 Polarization: 3.75 SS G_CDS: -3.94 Total: -0.19 kcal Atomic # 8 Polarization: -2.99 SS G_CDS: -1.98 Total: -4.97 kcal Atomic # 14 Polarization: -1.66 SS G_CDS: 2.00 Total: 0.33 kcal Atomic # 16 Polarization: -0.12 SS G_CDS: -1.25 Total: -1.37 kcal Atomic # 35 Polarization: -0.10 SS G_CDS: -0.67 Total: -0.78 kcal Total: -17.40 -1.05 -18.45 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525166_5000100.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.284 kcal (2) G-P(sol) polarization free energy of solvation -17.399 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.885 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.049 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.448 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.836 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds