Wall clock time and date at job start Sat Mar 6 2021 19:44:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81395 * 1 3 3 C 1.81400 * 103.00294 * 2 1 4 4 H 1.09005 * 112.84546 * 43.80015 * 3 2 1 5 5 C 1.53772 * 113.61640 * 174.99903 * 3 2 1 6 6 C 1.53783 * 87.08163 * 139.98070 * 5 3 2 7 7 H 1.09001 * 113.61103 * 219.93721 * 6 5 3 8 8 N 1.46492 * 113.61322 * 89.11633 * 6 5 3 9 9 C 1.34782 * 120.00067 * 155.00303 * 8 6 5 10 10 O 1.21283 * 119.99581 * 359.97438 * 9 8 6 11 11 C 1.50701 * 120.00551 * 179.97438 * 9 8 6 12 12 O 1.42892 * 109.47260 * 179.97438 * 11 9 8 13 13 C 1.35917 * 116.99952 * 180.02562 * 12 11 9 14 14 C 1.38788 * 120.06323 * 179.97438 * 13 12 11 15 15 Br 1.89107 * 120.03252 * 0.04111 * 14 13 12 16 16 C 1.38233 * 119.93242 * 179.76660 * 14 13 12 17 17 C 1.38250 * 120.04414 * 0.50689 * 16 14 13 18 18 C 1.50699 * 119.94218 * 179.76810 * 17 16 14 19 19 O 1.42901 * 109.46830 * 119.72225 * 18 17 16 20 20 Si 1.86298 * 109.46950 * 359.72662 * 18 17 16 21 21 C 1.38278 * 120.11351 * 359.48739 * 17 16 14 22 22 C 1.38146 * 120.07848 * 0.25952 * 21 17 16 23 23 C 1.53777 * 113.61268 * 272.50038 * 3 2 1 24 24 H 1.09002 * 109.47166 * 60.00141 * 1 2 3 25 25 H 1.09001 * 109.47376 * 180.02562 * 1 2 3 26 26 H 1.08999 * 109.47208 * 299.99960 * 1 2 3 27 27 H 1.08998 * 113.61559 * 25.43476 * 5 3 2 28 28 H 1.09000 * 113.69370 * 254.54015 * 5 3 2 29 29 H 0.96996 * 120.00433 * 334.99429 * 8 6 5 30 30 H 1.09003 * 109.46946 * 59.99270 * 11 9 8 31 31 H 1.09003 * 109.46577 * 300.00388 * 11 9 8 32 32 H 1.08004 * 119.98274 * 180.25301 * 16 14 13 33 33 H 1.08991 * 109.47351 * 239.72373 * 18 17 16 34 34 H 0.96708 * 114.00246 * 299.99864 * 19 18 17 35 35 H 1.48506 * 109.99834 * 180.02562 * 20 18 17 36 36 H 1.48502 * 110.00011 * 301.31529 * 20 18 17 37 37 H 1.08007 * 119.96246 * 180.27812 * 21 17 16 38 38 H 1.07993 * 120.03063 * 180.02562 * 22 21 17 39 39 H 1.09000 * 113.61970 * 105.46594 * 23 3 2 40 40 H 1.09004 * 113.61400 * 334.55969 * 23 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2221 1.7675 0.0000 4 1 1.6109 2.3430 0.6953 5 6 3.7283 2.0519 0.1228 6 6 3.5206 3.1737 -0.9084 7 1 4.3245 3.2478 -1.6408 8 7 3.1762 4.4653 -0.3090 9 6 3.4495 5.6086 -0.9685 10 8 3.9809 5.5679 -2.0579 11 6 3.0947 6.9373 -0.3523 12 8 3.4817 7.9909 -1.2365 13 6 3.2310 9.2627 -0.8279 14 6 3.5812 10.3347 -1.6369 15 35 4.4070 10.0276 -3.3101 16 6 3.3205 11.6269 -1.2208 17 6 2.7211 11.8519 0.0046 18 6 2.4428 13.2618 0.4582 19 8 1.0381 13.4280 0.6619 20 14 3.0275 14.4597 -0.8432 21 6 2.3713 10.7852 0.8120 22 6 2.6248 9.4917 0.3988 23 6 2.3008 2.3815 -1.4077 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3634 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 4.3572 1.2381 -0.2381 28 1 4.0270 2.4132 1.1069 29 1 2.7514 4.4978 0.5624 30 1 3.6188 7.0490 0.5970 31 1 2.0192 6.9827 -0.1809 32 1 3.5890 12.4616 -1.8515 33 1 2.9706 13.4538 1.3923 34 1 0.5047 13.2723 -0.1296 35 1 2.7593 15.8538 -0.4075 36 1 4.4807 14.2751 -1.0872 37 1 1.8991 10.9637 1.7669 38 1 2.3509 8.6592 1.0298 39 1 1.4456 3.0089 -1.6589 40 1 2.5395 1.6577 -2.1870 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12525166_6201210.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:44:13 Heat of formation + Delta-G solvation = -34.068862 kcal Electronic energy + Delta-G solvation = -24383.703973 eV Core-core repulsion = 20532.460116 eV Total energy + Delta-G solvation = -3851.243856 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.018 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -41.83000 -41.15018 -39.69120 -38.81265 -37.29837 -34.53941 -33.50905 -32.24346 -30.57186 -30.01084 -29.68002 -26.96906 -26.66498 -26.10467 -24.13091 -22.60536 -22.01530 -20.84469 -19.66336 -18.76812 -18.22349 -17.86312 -17.62540 -17.14842 -16.97822 -16.56402 -16.12415 -15.98258 -15.77725 -15.73638 -15.41837 -15.05334 -14.80068 -14.64462 -14.35310 -14.22386 -14.12745 -14.10457 -13.73369 -13.64697 -13.49379 -12.66024 -12.51801 -12.36528 -12.20276 -11.99377 -11.86324 -11.83084 -11.73421 -11.08934 -11.03434 -10.93645 -10.55311 -10.32815 -10.05179 -9.35362 -8.72361 -5.10268 -0.10475 -0.00192 0.63847 0.67492 1.20100 1.21231 1.34736 1.49570 1.56672 1.91149 2.30708 2.31285 3.16077 3.19319 3.27579 3.34669 3.41434 3.52275 3.59798 3.64354 3.72131 3.74881 3.79897 3.96704 4.10413 4.13629 4.22811 4.31356 4.35215 4.49550 4.52224 4.56347 4.61015 4.68764 4.69468 4.73617 4.83057 4.91496 5.19134 5.28779 5.34829 5.91463 6.18684 6.46823 6.96087 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.250 6.250 3 C -0.086 4.086 4 H 0.104 0.896 5 C -0.115 4.115 6 C 0.126 3.874 7 H 0.114 0.886 8 N -0.712 5.712 9 C 0.519 3.481 10 O -0.501 6.501 11 C 0.038 3.962 12 O -0.273 6.273 13 C 0.161 3.839 14 C -0.119 4.119 15 Br -0.023 7.023 16 C -0.050 4.050 17 C -0.151 4.151 18 C -0.060 4.060 19 O -0.539 6.539 20 Si 0.679 3.321 21 C -0.035 4.035 22 C -0.204 4.204 23 C -0.138 4.138 24 H 0.077 0.923 25 H 0.102 0.898 26 H 0.076 0.924 27 H 0.107 0.893 28 H 0.085 0.915 29 H 0.402 0.598 30 H 0.098 0.902 31 H 0.098 0.902 32 H 0.142 0.858 33 H 0.117 0.883 34 H 0.380 0.620 35 H -0.250 1.250 36 H -0.254 1.254 37 H 0.138 0.862 38 H 0.139 0.861 39 H 0.076 0.924 40 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.213 -0.735 3.566 5.568 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.021 6.021 3 C -0.215 4.215 4 H 0.122 0.878 5 C -0.155 4.155 6 C 0.019 3.981 7 H 0.132 0.868 8 N -0.366 5.366 9 C 0.303 3.697 10 O -0.374 6.374 11 C -0.041 4.041 12 O -0.185 6.185 13 C 0.112 3.888 14 C -0.199 4.199 15 Br 0.063 6.937 16 C -0.069 4.069 17 C -0.153 4.153 18 C -0.171 4.171 19 O -0.345 6.345 20 Si 0.581 3.419 21 C -0.054 4.054 22 C -0.224 4.224 23 C -0.179 4.179 24 H 0.096 0.904 25 H 0.120 0.880 26 H 0.095 0.905 27 H 0.126 0.874 28 H 0.104 0.896 29 H 0.237 0.763 30 H 0.116 0.884 31 H 0.116 0.884 32 H 0.160 0.840 33 H 0.134 0.866 34 H 0.228 0.772 35 H -0.175 1.175 36 H -0.178 1.178 37 H 0.155 0.845 38 H 0.157 0.843 39 H 0.095 0.905 40 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges -2.011 -1.041 2.362 3.272 hybrid contribution -1.367 0.576 1.701 2.257 sum -3.378 -0.465 4.063 5.304 Atomic orbital electron populations 1.23381 0.94038 1.06726 1.04960 1.86992 1.07646 1.09881 1.97616 1.24806 1.00779 0.94729 1.01212 0.87816 1.23175 0.93701 0.98093 1.00490 1.21823 0.98575 0.81229 0.96514 0.86769 1.45473 1.63664 1.04808 1.22664 1.19953 0.79112 0.84755 0.85855 1.90821 1.40009 1.86886 1.19668 1.22528 1.02095 0.85616 0.93843 1.86278 1.77349 1.11220 1.43643 1.18628 0.93965 0.83827 0.92347 1.20998 1.09596 0.93321 0.96005 1.96822 1.79055 1.96895 1.20957 1.20860 0.96131 0.94536 0.95372 1.20258 1.03168 0.96832 0.95027 1.24929 0.86629 0.97043 1.08530 1.86507 1.15598 1.92661 1.39714 0.94780 0.83104 0.78702 0.85352 1.20941 0.94579 0.90733 0.99111 1.21285 1.05875 0.98947 0.96261 1.23786 0.99088 0.99297 0.95730 0.90354 0.87978 0.90512 0.87417 0.89631 0.76327 0.88425 0.88436 0.84037 0.86587 0.77230 1.17499 1.17830 0.84454 0.84331 0.90489 0.87490 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.23 10.76 101.05 1.09 1.32 16 2 S -0.25 0.00 22.17 -107.50 -2.38 -2.38 16 3 C -0.09 0.20 4.15 -25.93 -0.11 0.10 16 4 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 5 C -0.12 0.32 7.42 -25.92 -0.19 0.13 16 6 C 0.13 -0.23 4.32 -67.12 -0.29 -0.52 16 7 H 0.11 0.01 7.46 -51.93 -0.39 -0.38 16 8 N -0.71 2.01 5.26 -53.02 -0.28 1.73 16 9 C 0.52 0.11 7.91 -10.98 -0.09 0.03 16 10 O -0.50 -2.68 16.10 -14.36 -0.23 -2.91 16 11 C 0.04 -0.08 5.22 36.01 0.19 0.11 16 12 O -0.27 -0.51 9.00 -39.39 -0.35 -0.87 16 13 C 0.16 0.16 6.68 -39.20 -0.26 -0.10 16 14 C -0.12 -0.20 6.24 -39.38 -0.25 -0.45 16 15 Br -0.02 -0.07 33.16 -68.01 -2.26 -2.32 16 16 C -0.05 0.00 8.40 -39.58 -0.33 -0.33 16 17 C -0.15 0.12 5.39 -104.60 -0.56 -0.45 16 18 C -0.06 0.07 2.82 36.01 0.10 0.17 16 19 O -0.54 0.51 12.77 -35.23 -0.45 0.06 16 20 Si 0.68 -0.90 29.78 -169.99 -5.06 -5.96 16 21 C -0.04 0.04 9.60 -39.60 -0.38 -0.34 16 22 C -0.20 0.29 9.04 -39.43 -0.36 -0.07 16 23 C -0.14 0.26 7.47 -25.92 -0.19 0.06 16 24 H 0.08 -0.18 8.14 -51.92 -0.42 -0.60 16 25 H 0.10 -0.22 8.14 -51.92 -0.42 -0.64 16 26 H 0.08 -0.20 8.14 -51.92 -0.42 -0.62 16 27 H 0.11 -0.24 8.10 -51.93 -0.42 -0.66 16 28 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 29 H 0.40 -2.39 8.70 -40.82 -0.36 -2.74 16 30 H 0.10 -0.46 7.66 -51.93 -0.40 -0.86 16 31 H 0.10 -0.48 7.66 -51.93 -0.40 -0.87 16 32 H 0.14 -0.17 4.87 -52.48 -0.26 -0.43 16 33 H 0.12 -0.12 7.96 -51.93 -0.41 -0.54 16 34 H 0.38 -1.75 8.70 45.56 0.40 -1.36 16 35 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 36 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 37 H 0.14 -0.34 8.06 -52.48 -0.42 -0.76 16 38 H 0.14 -0.60 6.30 -52.49 -0.33 -0.93 16 39 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 40 H 0.11 -0.14 8.10 -51.93 -0.42 -0.56 16 LS Contribution 370.31 15.07 5.58 5.58 Total: 0.00 -9.16 370.31 -12.21 -21.37 By element: Atomic # 1 Polarization: -8.81 SS G_CDS: -5.14 Total: -13.95 kcal Atomic # 6 Polarization: 1.29 SS G_CDS: -1.63 Total: -0.34 kcal Atomic # 7 Polarization: 2.01 SS G_CDS: -0.28 Total: 1.73 kcal Atomic # 8 Polarization: -2.68 SS G_CDS: -1.04 Total: -3.72 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.06 Total: -5.96 kcal Atomic # 16 Polarization: 0.00 SS G_CDS: -2.38 Total: -2.38 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.26 Total: -2.32 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -9.16 -12.21 -21.37 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525166_6201210.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.701 kcal (2) G-P(sol) polarization free energy of solvation -9.158 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.859 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.210 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.368 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.069 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds