Wall clock time and date at job start Sat Mar 6 2021 19:44:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81393 * 1 3 3 C 1.81403 * 103.00127 * 2 1 4 4 H 1.08996 * 112.84698 * 43.80610 * 3 2 1 5 5 C 1.53778 * 113.61384 * 174.99917 * 3 2 1 6 6 C 1.53778 * 87.08017 * 140.06288 * 5 3 2 7 7 H 1.09002 * 113.61784 * 219.93335 * 6 5 3 8 8 N 1.46507 * 113.61149 * 89.11832 * 6 5 3 9 9 C 1.34778 * 120.00058 * 155.00559 * 8 6 5 10 10 O 1.21281 * 119.99856 * 359.97438 * 9 8 6 11 11 C 1.50696 * 119.99800 * 180.02562 * 9 8 6 12 12 N 1.46905 * 109.47019 * 179.97438 * 11 9 8 13 13 C 1.46898 * 110.99928 * 66.04544 * 12 11 9 14 14 C 1.39674 * 110.99805 * 189.99414 * 12 11 9 15 15 C 1.38894 * 120.06915 * 120.00116 * 14 12 11 16 16 C 1.50702 * 120.03816 * 0.02562 * 15 14 12 17 17 O 1.42908 * 109.46645 * 284.99475 * 16 15 14 18 18 Si 1.86298 * 109.46915 * 165.00223 * 16 15 14 19 19 C 1.38123 * 119.92142 * 180.27538 * 15 14 12 20 20 C 1.38270 * 120.07661 * 359.48884 * 19 15 14 21 21 C 1.50698 * 119.92299 * 180.27741 * 20 19 15 22 22 F 1.39904 * 109.46572 * 180.23580 * 21 20 19 23 23 F 1.39901 * 109.47451 * 300.22959 * 21 20 19 24 24 F 1.39892 * 109.47471 * 60.23742 * 21 20 19 25 25 C 1.38306 * 120.14639 * 0.51425 * 20 19 15 26 26 C 1.38082 * 120.07820 * 359.74095 * 25 20 19 27 27 C 1.53777 * 87.08456 * 334.56978 * 6 5 3 28 28 H 1.09000 * 109.47242 * 60.00285 * 1 2 3 29 29 H 1.09001 * 109.47613 * 180.02562 * 1 2 3 30 30 H 1.08999 * 109.47251 * 299.99814 * 1 2 3 31 31 H 1.08997 * 113.61585 * 25.51823 * 5 3 2 32 32 H 1.08999 * 113.61390 * 254.61568 * 5 3 2 33 33 H 0.96998 * 119.99569 * 334.99358 * 8 6 5 34 34 H 1.09000 * 109.47716 * 59.99281 * 11 9 8 35 35 H 1.09001 * 109.46822 * 299.99127 * 11 9 8 36 36 H 1.08997 * 109.47010 * 183.95482 * 13 12 11 37 37 H 1.09003 * 109.46938 * 303.95249 * 13 12 11 38 38 H 1.08999 * 109.47259 * 63.95072 * 13 12 11 39 39 H 1.08996 * 109.47312 * 44.99566 * 16 15 14 40 40 H 0.96699 * 113.99775 * 60.00016 * 17 16 15 41 41 H 1.48506 * 109.99834 * 178.68053 * 18 16 15 42 42 H 1.48502 * 110.00011 * 299.99318 * 18 16 15 43 43 H 1.08006 * 119.96158 * 179.73031 * 19 15 14 44 44 H 1.08003 * 119.95857 * 179.72244 * 25 20 19 45 45 H 1.08000 * 120.04189 * 179.97438 * 26 25 20 46 46 H 1.08994 * 113.62016 * 139.97998 * 27 6 5 47 47 H 1.09005 * 113.61351 * 270.88352 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8139 0.0000 0.0000 3 6 2.2220 1.7675 0.0000 4 1 1.6109 2.3430 0.6953 5 6 3.7283 2.0519 0.1228 6 6 3.5202 3.1751 -0.9067 7 1 4.3238 3.2505 -1.6393 8 7 3.1758 4.4659 -0.3053 9 6 3.4487 5.6101 -0.9632 10 8 3.9798 5.5712 -2.0529 11 6 3.0950 6.9379 -0.3444 12 7 3.4922 8.0225 -1.2521 13 6 2.6996 7.9910 -2.4885 14 6 3.3885 9.2651 -0.6227 15 6 4.5119 10.0696 -0.4815 16 6 5.8447 9.6032 -1.0080 17 8 6.3754 8.6003 -0.1392 18 14 7.0216 11.0454 -1.0835 19 6 4.4070 11.2953 0.1465 20 6 3.1834 11.7263 0.6250 21 6 3.0718 13.0670 1.3040 22 9 1.7477 13.2785 1.7035 23 9 3.9070 13.0926 2.4260 24 9 3.4566 14.0746 0.4131 25 6 2.0629 10.9277 0.4861 26 6 2.1616 9.6989 -0.1360 27 6 2.3003 2.3836 -1.4068 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3634 0.5138 0.8900 31 1 4.3572 1.2387 -0.2394 32 1 4.0258 2.4119 1.1077 33 1 2.7513 4.4970 0.5663 34 1 3.6201 7.0480 0.6045 35 1 2.0197 6.9834 -0.1720 36 1 3.0609 8.7598 -3.1714 37 1 2.7980 7.0123 -2.9583 38 1 1.6517 8.1773 -2.2532 39 1 5.7153 9.1871 -2.0070 40 1 5.8135 7.8182 -0.0519 41 1 8.3493 10.5925 -1.5710 42 1 6.4812 12.0954 -1.9838 43 1 5.2810 11.9195 0.2604 44 1 1.1095 11.2654 0.8650 45 1 1.2863 9.0755 -0.2437 46 1 1.4450 3.0113 -1.6569 47 1 2.5388 1.6610 -2.1873 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12525166_6406254.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:44:16 Heat of formation + Delta-G solvation = -139.218178 kcal Electronic energy + Delta-G solvation = -34712.798196 eV Core-core repulsion = 29575.094223 eV Total energy + Delta-G solvation = -5137.703973 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.122 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -51.15162 -48.67797 -48.59536 -41.98521 -41.15962 -39.50976 -37.67021 -37.55814 -34.49048 -33.07997 -32.25224 -30.04799 -29.72950 -27.76861 -26.98627 -26.97785 -26.34807 -25.08690 -23.54029 -22.28650 -21.73694 -20.80028 -19.54726 -19.46992 -19.46106 -18.82230 -18.15814 -17.89403 -17.65061 -17.18238 -16.93981 -16.58851 -16.41217 -16.15898 -15.70167 -15.58314 -15.50740 -15.48747 -15.30597 -15.11851 -15.03851 -14.85804 -14.81172 -14.75334 -14.66178 -14.61301 -14.23258 -14.18678 -14.10857 -13.92023 -13.74090 -13.63257 -13.32007 -13.05008 -13.04360 -12.68842 -12.64244 -12.03819 -11.98100 -11.73429 -11.43098 -11.13256 -11.02843 -10.94936 -10.36847 -10.29299 -10.18790 -9.88629 -8.73743 -4.89673 -0.48274 -0.11275 0.62641 1.37755 1.39442 1.46940 1.58290 1.64174 1.67340 2.02947 2.06001 2.46585 2.66663 2.92759 3.15873 3.19486 3.37503 3.38387 3.40000 3.51760 3.55699 3.71123 3.76242 3.78344 3.82899 3.92221 4.02046 4.06310 4.08404 4.11552 4.24498 4.30778 4.31830 4.37854 4.49633 4.51033 4.56599 4.61288 4.66687 4.71441 4.78701 4.81600 4.84942 4.91060 5.01020 5.23182 5.32079 5.37025 5.89254 6.23577 6.57429 7.01837 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.250 6.250 3 C -0.086 4.086 4 H 0.103 0.897 5 C -0.116 4.116 6 C 0.126 3.874 7 H 0.113 0.887 8 N -0.715 5.715 9 C 0.518 3.482 10 O -0.511 6.511 11 C 0.034 3.966 12 N -0.493 5.493 13 C 0.020 3.980 14 C 0.126 3.874 15 C -0.087 4.087 16 C -0.064 4.064 17 O -0.530 6.530 18 Si 0.727 3.273 19 C -0.053 4.053 20 C -0.176 4.176 21 C 0.509 3.491 22 F -0.176 7.176 23 F -0.172 7.172 24 F -0.174 7.174 25 C -0.058 4.058 26 C -0.147 4.147 27 C -0.138 4.138 28 H 0.077 0.923 29 H 0.101 0.899 30 H 0.076 0.924 31 H 0.106 0.894 32 H 0.085 0.915 33 H 0.401 0.599 34 H 0.111 0.889 35 H 0.074 0.926 36 H 0.074 0.926 37 H 0.097 0.903 38 H 0.032 0.968 39 H 0.086 0.914 40 H 0.364 0.636 41 H -0.250 1.250 42 H -0.248 1.248 43 H 0.144 0.856 44 H 0.143 0.857 45 H 0.135 0.865 46 H 0.074 0.926 47 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.443 -1.835 2.696 5.512 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.021 6.021 3 C -0.215 4.215 4 H 0.121 0.879 5 C -0.155 4.155 6 C 0.018 3.982 7 H 0.131 0.869 8 N -0.368 5.368 9 C 0.303 3.697 10 O -0.385 6.385 11 C -0.096 4.096 12 N -0.214 5.214 13 C -0.125 4.125 14 C 0.032 3.968 15 C -0.088 4.088 16 C -0.173 4.173 17 O -0.335 6.335 18 Si 0.626 3.374 19 C -0.071 4.071 20 C -0.178 4.178 21 C 0.454 3.546 22 F -0.157 7.157 23 F -0.153 7.153 24 F -0.155 7.155 25 C -0.076 4.076 26 C -0.167 4.167 27 C -0.179 4.179 28 H 0.096 0.904 29 H 0.120 0.880 30 H 0.095 0.905 31 H 0.125 0.875 32 H 0.104 0.896 33 H 0.236 0.764 34 H 0.130 0.870 35 H 0.092 0.908 36 H 0.093 0.907 37 H 0.116 0.884 38 H 0.051 0.949 39 H 0.103 0.897 40 H 0.212 0.788 41 H -0.174 1.174 42 H -0.172 1.172 43 H 0.161 0.839 44 H 0.161 0.839 45 H 0.153 0.847 46 H 0.093 0.907 47 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -1.914 -1.905 1.316 3.004 hybrid contribution -3.261 0.066 0.144 3.265 sum -5.175 -1.839 1.460 5.683 Atomic orbital electron populations 1.23377 0.94104 1.06720 1.04913 1.87003 1.07574 1.09951 1.97610 1.24799 1.00852 0.94643 1.01167 0.87891 1.23172 0.93597 0.98157 1.00582 1.21794 0.98330 0.81629 0.96416 0.86907 1.45650 1.63394 1.05076 1.22653 1.20351 0.78477 0.85080 0.85747 1.90741 1.40735 1.86968 1.20064 1.22118 1.01317 0.89197 0.96924 1.59264 1.57171 0.99556 1.05400 1.22680 0.94127 1.05428 0.90306 1.18826 0.92082 0.90806 0.95041 1.20252 0.96117 0.93613 0.98856 1.25325 0.96602 1.00102 0.95307 1.86733 1.48997 1.30132 1.67656 0.93337 0.78182 0.76779 0.89118 1.20696 0.96248 0.95404 0.94747 1.19987 0.96554 0.94875 1.06354 1.18221 0.73881 0.85437 0.77027 1.93184 1.35750 1.95584 1.91198 1.93251 1.71738 1.96842 1.53480 1.93246 1.90931 1.63256 1.68046 1.20936 0.97939 0.93028 0.95738 1.21670 0.98060 0.96960 0.99991 1.23772 0.99091 0.99293 0.95733 0.90418 0.87981 0.90519 0.87532 0.89632 0.76447 0.87048 0.90783 0.90684 0.88441 0.94942 0.89667 0.78777 1.17428 1.17235 0.83870 0.83887 0.84722 0.90710 0.87650 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.24 10.76 101.05 1.09 1.33 16 2 S -0.25 0.02 22.18 -107.50 -2.38 -2.36 16 3 C -0.09 0.22 4.15 -25.92 -0.11 0.11 16 4 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 5 C -0.12 0.34 7.42 -25.92 -0.19 0.15 16 6 C 0.13 -0.30 4.32 -67.12 -0.29 -0.59 16 7 H 0.11 -0.05 7.46 -51.93 -0.39 -0.44 16 8 N -0.72 2.53 5.26 -53.02 -0.28 2.25 16 9 C 0.52 -0.76 7.52 -10.99 -0.08 -0.84 16 10 O -0.51 -1.37 13.93 5.56 0.08 -1.29 16 11 C 0.03 -0.12 4.91 -4.98 -0.02 -0.14 16 12 N -0.49 0.65 3.19 -180.33 -0.58 0.07 16 13 C 0.02 -0.02 9.02 60.06 0.54 0.52 16 14 C 0.13 -0.14 4.62 -83.78 -0.39 -0.53 16 15 C -0.09 0.01 5.28 -104.42 -0.55 -0.54 16 16 C -0.06 -0.05 2.30 36.01 0.08 0.03 16 17 O -0.53 -0.78 12.65 -35.23 -0.45 -1.23 16 18 Si 0.73 0.28 30.18 -169.99 -5.13 -4.85 16 19 C -0.05 0.02 8.20 -39.61 -0.32 -0.31 16 20 C -0.18 0.06 5.37 -104.59 -0.56 -0.50 16 21 C 0.51 0.28 3.31 36.00 0.12 0.40 16 22 F -0.18 -0.14 15.97 2.25 0.04 -0.11 16 23 F -0.17 -0.19 17.23 2.25 0.04 -0.15 16 24 F -0.17 -0.26 17.24 2.25 0.04 -0.22 16 25 C -0.06 0.09 9.42 -39.61 -0.37 -0.28 16 26 C -0.15 0.33 8.66 -39.38 -0.34 -0.01 16 27 C -0.14 0.32 7.47 -25.92 -0.19 0.12 16 28 H 0.08 -0.19 8.14 -51.92 -0.42 -0.61 16 29 H 0.10 -0.23 8.14 -51.92 -0.42 -0.65 16 30 H 0.08 -0.21 8.14 -51.92 -0.42 -0.63 16 31 H 0.11 -0.24 8.10 -51.93 -0.42 -0.66 16 32 H 0.09 -0.31 8.14 -51.93 -0.42 -0.74 16 33 H 0.40 -2.41 8.70 -40.82 -0.36 -2.76 16 34 H 0.11 -0.54 8.06 -51.93 -0.42 -0.95 16 35 H 0.07 -0.39 7.48 -51.93 -0.39 -0.78 16 36 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 37 H 0.10 0.06 5.83 -51.93 -0.30 -0.25 16 38 H 0.03 -0.07 7.34 -51.93 -0.38 -0.45 16 39 H 0.09 0.13 7.78 -51.93 -0.40 -0.27 16 40 H 0.36 -0.03 8.38 45.56 0.38 0.36 16 41 H -0.25 -0.84 7.11 56.52 0.40 -0.43 16 42 H -0.25 -0.42 7.11 56.52 0.40 -0.02 16 43 H 0.14 -0.24 5.14 -52.48 -0.27 -0.51 16 44 H 0.14 -0.42 7.15 -52.48 -0.38 -0.79 16 45 H 0.13 -0.55 7.14 -52.49 -0.37 -0.92 16 46 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 47 H 0.11 -0.17 8.10 -51.93 -0.42 -0.59 16 LS Contribution 408.43 15.07 6.15 6.15 Total: 0.00 -6.40 408.43 -10.34 -16.74 By element: Atomic # 1 Polarization: -7.65 SS G_CDS: -6.27 Total: -13.92 kcal Atomic # 6 Polarization: 0.52 SS G_CDS: -1.60 Total: -1.08 kcal Atomic # 7 Polarization: 3.17 SS G_CDS: -0.85 Total: 2.32 kcal Atomic # 8 Polarization: -2.16 SS G_CDS: -0.37 Total: -2.52 kcal Atomic # 9 Polarization: -0.59 SS G_CDS: 0.11 Total: -0.48 kcal Atomic # 14 Polarization: 0.28 SS G_CDS: -5.13 Total: -4.85 kcal Atomic # 16 Polarization: 0.02 SS G_CDS: -2.38 Total: -2.36 kcal Total LS contribution 6.15 Total: 6.15 kcal Total: -6.40 -10.34 -16.74 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525166_6406254.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -122.474 kcal (2) G-P(sol) polarization free energy of solvation -6.405 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.879 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.340 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.745 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.218 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds