Wall clock time and date at job start Sat Mar 6 2021 19:44:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81395 * 1 3 3 C 1.81399 * 103.00478 * 2 1 4 4 H 1.08999 * 112.84324 * 43.80083 * 3 2 1 5 5 C 1.53774 * 113.61872 * 175.00306 * 3 2 1 6 6 C 1.53778 * 87.08361 * 140.06695 * 5 3 2 7 7 H 1.09004 * 113.61120 * 219.93704 * 6 5 3 8 8 N 1.46500 * 113.61697 * 89.11278 * 6 5 3 9 9 C 1.34780 * 119.99789 * 154.99837 * 8 6 5 10 10 O 1.21590 * 119.99882 * 0.02562 * 9 8 6 11 11 C 1.47523 * 119.99607 * 180.02562 * 9 8 6 12 12 C 1.36599 * 125.76762 * 180.30312 * 11 9 8 13 13 N 1.34819 * 106.83691 * 180.17541 * 12 11 9 14 14 C 1.46503 * 126.59116 * 179.85193 * 13 12 11 15 15 C 1.52992 * 109.46848 * 124.72049 * 14 13 12 16 16 O 1.42901 * 109.47468 * 179.97438 * 15 14 13 17 17 C 1.35922 * 117.00692 * 179.97438 * 16 15 14 18 18 C 1.38807 * 120.06006 * 179.97438 * 17 16 15 19 19 Cl 1.73596 * 120.04167 * 0.02777 * 18 17 16 20 20 C 1.38267 * 119.92162 * 179.75272 * 18 17 16 21 21 C 1.38246 * 120.03819 * 0.54657 * 20 18 17 22 22 C 1.50693 * 119.93651 * 179.73057 * 21 20 18 23 23 O 1.42907 * 109.47661 * 119.72817 * 22 21 20 24 24 Si 1.86298 * 109.47618 * 359.72508 * 22 21 20 25 25 C 1.38272 * 120.12238 * 359.44933 * 21 20 18 26 26 C 1.38154 * 120.07667 * 0.28129 * 25 21 20 27 27 N 1.40208 * 106.81047 * 359.59653 * 13 12 11 28 28 N 1.28757 * 108.36809 * 0.25583 * 27 13 12 29 29 C 1.53778 * 87.07912 * 334.56496 * 6 5 3 30 30 H 1.09001 * 109.47130 * 299.99752 * 1 2 3 31 31 H 1.09000 * 109.47155 * 59.99639 * 1 2 3 32 32 H 1.08997 * 109.47397 * 179.97438 * 1 2 3 33 33 H 1.09004 * 113.61344 * 25.51290 * 5 3 2 34 34 H 1.09007 * 113.61311 * 254.61699 * 5 3 2 35 35 H 0.97003 * 120.00014 * 335.00681 * 8 6 5 36 36 H 1.08001 * 126.58179 * 0.03741 * 12 11 9 37 37 H 1.08998 * 109.47049 * 4.71533 * 14 13 12 38 38 H 1.09006 * 109.46987 * 244.71833 * 14 13 12 39 39 H 1.08998 * 109.47716 * 59.99893 * 15 14 13 40 40 H 1.09006 * 109.47150 * 299.99685 * 15 14 13 41 41 H 1.08000 * 119.97678 * 180.27706 * 20 18 17 42 42 H 1.09000 * 109.46936 * 239.72441 * 22 21 20 43 43 H 0.96697 * 114.00527 * 179.97438 * 23 22 21 44 44 H 1.48506 * 109.99834 * 298.68714 * 24 22 21 45 45 H 1.48502 * 110.00011 * 59.99978 * 24 22 21 46 46 H 1.08003 * 119.96698 * 180.29190 * 25 21 20 47 47 H 1.08003 * 120.02540 * 179.97438 * 26 25 21 48 48 H 1.09008 * 113.61225 * 139.97951 * 29 6 5 49 49 H 1.08996 * 113.61897 * 270.88577 * 29 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8139 0.0000 0.0000 3 6 2.2222 1.7675 0.0000 4 1 1.6110 2.3429 0.6953 5 6 3.7284 2.0519 0.1227 6 6 3.5202 3.1752 -0.9067 7 1 4.3239 3.2504 -1.6393 8 7 3.1758 4.4659 -0.3054 9 6 3.4489 5.6101 -0.9632 10 8 3.9806 5.5710 -2.0560 11 6 3.1025 6.9099 -0.3574 12 6 3.3193 8.1358 -0.9195 13 7 2.8639 9.0534 -0.0429 14 6 2.8870 10.5085 -0.2109 15 6 1.4709 11.0634 -0.0453 16 8 1.4933 12.4829 -0.2086 17 6 0.3072 13.1364 -0.0916 18 6 0.2561 14.5158 -0.2380 19 17 1.7069 15.4088 -0.5715 20 6 -0.9528 15.1772 -0.1235 21 6 -2.1073 14.4667 0.1476 22 6 -3.4226 15.1905 0.2779 23 8 -4.3337 14.7048 -0.7101 24 14 -3.1536 17.0172 0.0298 25 6 -2.0583 13.0926 0.2937 26 6 -0.8540 12.4262 0.1748 27 7 2.3588 8.3469 1.0578 28 7 2.5156 7.0878 0.8385 29 6 2.3004 2.3835 -1.4068 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5139 -0.8899 32 1 -0.3634 -1.0276 -0.0005 33 1 4.3572 1.2386 -0.2395 34 1 4.0259 2.4119 1.1077 35 1 2.7514 4.4971 0.5663 36 1 3.7709 8.3325 -1.8806 37 1 3.2593 10.7536 -1.2056 38 1 3.5408 10.9508 0.5409 39 1 1.0986 10.8184 0.9494 40 1 0.8171 10.6212 -0.7971 41 1 -0.9943 16.2499 -0.2417 42 1 -3.8366 15.0158 1.2710 43 1 -5.2033 15.1270 -0.6848 44 1 -2.2327 17.5409 1.0706 45 1 -2.5893 17.2687 -1.3206 46 1 -2.9626 12.5396 0.5009 47 1 -0.8167 11.3529 0.2895 48 1 1.4450 3.0113 -1.6568 49 1 2.5388 1.6610 -2.1873 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12525166_7143556.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:44:28 Heat of formation + Delta-G solvation = 56.671864 kcal Electronic energy + Delta-G solvation = -34019.930024 eV Core-core repulsion = 29105.070180 eV Total energy + Delta-G solvation = -4914.859844 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 425.101 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -43.41643 -41.63532 -41.12712 -39.50166 -39.14662 -37.86923 -37.20135 -36.22953 -34.35289 -32.63189 -32.33955 -32.00020 -30.69141 -29.83615 -26.93880 -26.80265 -26.56146 -25.81819 -24.60203 -24.09653 -22.90433 -22.44765 -21.73273 -20.67083 -19.93442 -19.16009 -18.43467 -17.93304 -17.83828 -17.53399 -17.43141 -17.04820 -17.03762 -16.97779 -16.34533 -16.05388 -15.93260 -15.75401 -15.62293 -15.37445 -15.15075 -15.12762 -14.84674 -14.72941 -14.47343 -14.23335 -14.05393 -14.01996 -13.90392 -13.69478 -13.56302 -13.51715 -13.24821 -12.75929 -12.64388 -12.54263 -12.49690 -12.42653 -12.18901 -12.09012 -11.86226 -11.84120 -11.60070 -11.54794 -11.38958 -10.85877 -10.56647 -10.36534 -10.22105 -10.17219 -9.44360 -8.69914 -4.99974 -0.18887 -0.10237 -0.03382 0.47200 0.65101 0.75883 0.89599 1.25978 1.59445 1.60587 1.84277 1.93084 1.94838 2.09388 2.22783 3.02909 3.12318 3.24421 3.32629 3.36303 3.39920 3.55280 3.60300 3.66278 3.70937 3.74174 3.82583 3.90592 3.92600 3.93113 3.99576 4.13498 4.27765 4.29390 4.31378 4.35456 4.38735 4.46925 4.54576 4.61020 4.64071 4.68866 4.73165 4.78163 4.85585 4.87951 4.89408 4.97840 5.14447 5.17922 5.29523 5.43684 5.88740 6.27184 6.74067 6.88762 7.00566 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 S -0.298 6.298 3 C -0.074 4.074 4 H 0.112 0.888 5 C -0.108 4.108 6 C 0.124 3.876 7 H 0.105 0.895 8 N -0.691 5.691 9 C 0.611 3.389 10 O -0.562 6.562 11 C -0.123 4.123 12 C 0.120 3.880 13 N -0.351 5.351 14 C 0.124 3.876 15 C 0.045 3.955 16 O -0.304 6.304 17 C 0.139 3.861 18 C -0.078 4.078 19 Cl -0.058 7.058 20 C -0.095 4.095 21 C -0.111 4.111 22 C -0.067 4.067 23 O -0.562 6.562 24 Si 0.759 3.241 25 C -0.044 4.044 26 C -0.189 4.189 27 N -0.082 5.082 28 N -0.214 5.214 29 C -0.132 4.132 30 H 0.084 0.916 31 H 0.082 0.918 32 H 0.105 0.895 33 H 0.108 0.892 34 H 0.094 0.906 35 H 0.415 0.585 36 H 0.238 0.762 37 H 0.150 0.850 38 H 0.124 0.876 39 H 0.083 0.917 40 H 0.083 0.917 41 H 0.128 0.872 42 H 0.105 0.895 43 H 0.406 0.594 44 H -0.287 1.287 45 H -0.298 1.298 46 H 0.158 0.842 47 H 0.162 0.838 48 H 0.074 0.926 49 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.885 2.576 1.454 6.587 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.282 4.282 2 S -0.070 6.070 3 C -0.203 4.203 4 H 0.131 0.869 5 C -0.148 4.148 6 C 0.016 3.984 7 H 0.123 0.877 8 N -0.342 5.342 9 C 0.397 3.603 10 O -0.440 6.440 11 C -0.263 4.263 12 C -0.037 4.037 13 N -0.136 5.136 14 C 0.004 3.996 15 C -0.031 4.031 16 O -0.216 6.216 17 C 0.093 3.907 18 C -0.106 4.106 19 Cl -0.029 7.029 20 C -0.113 4.113 21 C -0.112 4.112 22 C -0.177 4.177 23 O -0.372 6.372 24 Si 0.665 3.335 25 C -0.062 4.062 26 C -0.208 4.208 27 N -0.062 5.062 28 N -0.088 5.088 29 C -0.173 4.173 30 H 0.103 0.897 31 H 0.101 0.899 32 H 0.124 0.876 33 H 0.126 0.874 34 H 0.112 0.888 35 H 0.252 0.748 36 H 0.254 0.746 37 H 0.168 0.832 38 H 0.142 0.858 39 H 0.102 0.898 40 H 0.101 0.899 41 H 0.146 0.854 42 H 0.122 0.878 43 H 0.257 0.743 44 H -0.215 1.215 45 H -0.226 1.226 46 H 0.175 0.825 47 H 0.179 0.821 48 H 0.092 0.908 49 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges -4.125 2.220 1.710 4.987 hybrid contribution -0.222 0.641 -0.368 0.772 sum -4.347 2.862 1.342 5.375 Atomic orbital electron populations 1.23390 0.92099 1.07129 1.05603 1.87076 1.09996 1.12207 1.97723 1.24809 1.01212 0.92990 1.01277 0.86938 1.23145 0.93422 0.97465 1.00717 1.21822 0.98386 0.81456 0.96692 0.87717 1.45407 1.61588 1.04375 1.22784 1.16820 0.77320 0.82462 0.83745 1.90830 1.44710 1.87348 1.21092 1.21429 1.13953 0.95416 0.95464 1.23930 0.95193 0.87111 0.97469 1.50336 1.41027 1.08716 1.13516 1.21906 0.97325 0.71676 1.08716 1.23015 0.97971 0.78189 1.03901 1.85993 1.27974 1.21230 1.86418 1.18595 0.85867 0.89684 0.96596 1.20133 0.89171 0.89907 1.11339 1.98379 1.35980 1.74678 1.93853 1.20737 0.91141 0.99537 0.99878 1.19559 0.93604 0.94893 1.03113 1.24585 0.88964 1.08318 0.95843 1.86424 1.28002 1.67364 1.55417 0.94464 0.86879 0.75558 0.76553 1.21193 0.98292 0.92989 0.93711 1.21563 0.91298 1.01775 1.06121 1.81997 1.20035 0.97044 1.07135 1.74613 1.10415 1.10045 1.13772 1.23724 0.98767 0.98995 0.95838 0.89748 0.89868 0.87641 0.87397 0.88791 0.74775 0.74556 0.83230 0.85829 0.89844 0.89879 0.85432 0.87779 0.74267 1.21459 1.22575 0.82467 0.82066 0.90775 0.87659 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.25 10.76 113.37 1.22 1.47 16 2 S -0.30 -0.63 22.18 -56.49 -1.25 -1.88 16 3 C -0.07 0.14 4.15 31.12 0.13 0.27 16 4 H 0.11 -0.38 8.14 -2.39 -0.02 -0.40 16 5 C -0.11 0.31 7.41 31.12 0.23 0.54 16 6 C 0.12 -0.10 4.32 45.52 0.20 0.09 16 7 H 0.10 0.18 7.46 -2.39 -0.02 0.16 16 8 N -0.69 0.02 5.26 -443.21 -2.33 -2.32 16 9 C 0.61 2.39 7.82 86.69 0.68 3.07 16 10 O -0.56 -5.23 16.46 -4.00 -0.07 -5.29 16 11 C -0.12 -0.22 6.99 40.82 0.29 0.06 16 12 C 0.12 -0.43 11.27 83.85 0.95 0.52 16 13 N -0.35 1.32 3.69 -347.09 -1.28 0.04 16 14 C 0.12 -1.11 6.91 86.38 0.60 -0.51 16 15 C 0.05 -0.27 4.94 71.98 0.36 0.09 16 16 O -0.30 0.13 9.60 -92.67 -0.89 -0.76 16 17 C 0.14 0.35 6.68 22.52 0.15 0.50 16 18 C -0.08 -0.44 6.33 22.41 0.14 -0.30 16 19 Cl -0.06 -0.35 28.50 -2.72 -0.08 -0.43 16 20 C -0.09 -0.50 8.45 22.28 0.19 -0.31 16 21 C -0.11 -0.25 5.42 -19.86 -0.11 -0.36 16 22 C -0.07 0.21 2.81 71.23 0.20 0.41 16 23 O -0.56 1.82 12.74 -148.98 -1.90 -0.08 16 24 Si 0.76 -2.04 29.78 68.60 2.04 0.00 16 25 C -0.04 0.01 9.60 22.26 0.21 0.22 16 26 C -0.19 0.13 9.04 22.36 0.20 0.33 16 27 N -0.08 -0.21 13.65 37.02 0.51 0.29 16 28 N -0.21 -0.81 12.04 -49.99 -0.60 -1.41 16 29 C -0.13 0.19 7.47 31.12 0.23 0.42 16 30 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 31 H 0.08 -0.27 8.14 -2.39 -0.02 -0.28 16 32 H 0.10 -0.32 8.14 -2.39 -0.02 -0.34 16 33 H 0.11 -0.27 8.10 -2.39 -0.02 -0.29 16 34 H 0.09 -0.39 8.14 -2.38 -0.02 -0.41 16 35 H 0.42 -0.98 8.39 -92.71 -0.78 -1.75 16 36 H 0.24 -2.40 8.06 -2.91 -0.02 -2.42 16 37 H 0.15 -2.12 8.08 -2.39 -0.02 -2.14 16 38 H 0.12 -1.21 8.14 -2.38 -0.02 -1.23 16 39 H 0.08 -0.44 7.66 -2.39 -0.02 -0.46 16 40 H 0.08 -0.60 7.66 -2.38 -0.02 -0.62 16 41 H 0.13 0.72 4.87 -2.91 -0.01 0.71 16 42 H 0.10 -0.83 7.96 -2.39 -0.02 -0.85 16 43 H 0.41 -5.45 8.74 -74.06 -0.65 -6.10 16 44 H -0.29 -0.87 7.11 99.48 0.71 -0.16 16 45 H -0.30 -1.64 7.11 99.48 0.71 -0.94 16 46 H 0.16 -0.64 8.06 -2.91 -0.02 -0.66 16 47 H 0.16 -0.86 6.30 -2.91 -0.02 -0.88 16 48 H 0.07 -0.05 8.14 -2.38 -0.02 -0.07 16 49 H 0.11 -0.10 8.10 -2.39 -0.02 -0.12 16 Total: 0.00 -24.58 444.95 -0.35 -24.93 By element: Atomic # 1 Polarization: -19.23 SS G_CDS: -0.36 Total: -19.59 kcal Atomic # 6 Polarization: 0.64 SS G_CDS: 5.86 Total: 6.50 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -3.71 Total: -3.40 kcal Atomic # 8 Polarization: -3.28 SS G_CDS: -2.85 Total: -6.13 kcal Atomic # 14 Polarization: -2.04 SS G_CDS: 2.04 Total: 0.00 kcal Atomic # 16 Polarization: -0.63 SS G_CDS: -1.25 Total: -1.88 kcal Atomic # 17 Polarization: -0.35 SS G_CDS: -0.08 Total: -0.43 kcal Total: -24.58 -0.35 -24.93 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525166_7143556.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.600 kcal (2) G-P(sol) polarization free energy of solvation -24.578 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 57.021 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.349 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.928 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.672 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds