Wall clock time and date at job start Sat Mar 6 2021 19:44:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86298 * 109.46909 * 2 1 4 4 C 1.50707 * 109.46689 * 119.99660 * 2 1 3 5 5 C 1.35449 * 126.06201 * 245.02585 * 4 2 1 6 6 N 1.35536 * 108.86908 * 179.97438 * 5 4 2 7 7 C 1.37651 * 108.64299 * 359.97438 * 6 5 4 8 8 C 1.46681 * 126.23510 * 180.02562 * 7 6 5 9 9 O 1.21692 * 120.00068 * 180.02562 * 8 7 6 10 10 N 1.34780 * 119.99693 * 0.02562 * 8 7 6 11 11 C 1.46497 * 119.99769 * 179.97438 * 10 8 7 12 12 H 1.08997 * 112.85099 * 336.19494 * 11 10 8 13 13 C 1.53779 * 113.69123 * 107.46801 * 11 10 8 14 14 C 1.53779 * 87.08402 * 89.12592 * 13 11 10 15 15 H 1.09002 * 113.61557 * 270.88569 * 14 13 11 16 16 S 1.81397 * 113.61535 * 139.98341 * 14 13 11 17 17 C 1.76199 * 103.00258 * 87.50124 * 16 14 13 18 18 C 1.38980 * 120.07708 * 359.72789 * 17 16 14 19 19 C 1.38077 * 119.91801 * 179.71904 * 18 17 16 20 20 C 1.38313 * 120.07834 * 0.57530 * 19 18 17 21 21 C 1.38302 * 120.16001 * 359.67938 * 20 19 18 22 22 C 1.38079 * 120.08227 * 0.03900 * 21 20 19 23 23 C 1.53784 * 87.08045 * 25.43458 * 14 13 11 24 24 C 1.37869 * 107.53587 * 0.26145 * 7 6 5 25 25 H 0.96703 * 113.99742 * 60.00905 * 1 2 3 26 26 H 1.08994 * 109.47300 * 239.99474 * 2 1 3 27 27 H 1.48504 * 109.99973 * 298.67624 * 3 2 1 28 28 H 1.48497 * 110.00417 * 59.99743 * 3 2 1 29 29 H 1.07997 * 125.57388 * 0.02562 * 5 4 2 30 30 H 0.97001 * 125.68259 * 179.97438 * 6 5 4 31 31 H 0.96998 * 119.99913 * 0.02562 * 10 8 7 32 32 H 1.09006 * 113.61280 * 203.67416 * 13 11 10 33 33 H 1.08999 * 113.61062 * 334.49170 * 13 11 10 34 34 H 1.08003 * 120.03921 * 359.97438 * 18 17 16 35 35 H 1.07995 * 119.96149 * 180.27428 * 19 18 17 36 36 H 1.07995 * 119.91778 * 179.70269 * 20 19 18 37 37 H 1.07994 * 119.95997 * 180.02562 * 21 20 19 38 38 H 1.07995 * 120.04468 * 179.97438 * 22 21 20 39 39 H 1.09004 * 113.61451 * 220.02152 * 23 14 13 40 40 H 1.08994 * 113.61477 * 89.11454 * 23 14 13 41 41 H 1.07998 * 126.46358 * 179.70007 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 2.6329 -0.1496 2.2445 6 7 2.9044 -1.1025 3.1692 7 6 2.3674 -2.2958 2.7422 8 6 2.4346 -3.5792 3.4493 9 8 1.9178 -4.5687 2.9647 10 7 3.0688 -3.6626 4.6356 11 6 3.1354 -4.9442 5.3421 12 1 2.3330 -5.6256 5.0594 13 6 4.5302 -5.5913 5.3179 14 6 4.8307 -4.8056 6.6053 15 1 5.2461 -3.8141 6.4248 16 16 5.7731 -5.7534 7.8317 17 6 7.4454 -5.4526 7.3655 18 6 7.7288 -4.6460 6.2698 19 6 9.0406 -4.4077 5.9109 20 6 10.0718 -4.9804 6.6331 21 6 9.7935 -5.7879 7.7209 22 6 8.4842 -6.0259 8.0892 23 6 3.3146 -4.8009 6.8627 24 6 1.7595 -2.0663 1.5262 25 1 -0.3933 0.4416 -0.7652 26 1 1.7924 -0.5139 -0.8899 27 1 1.5879 2.4585 -1.2243 28 1 1.5614 2.4680 1.2084 29 1 2.9272 0.8877 2.3064 30 1 3.3954 -0.9663 3.9947 31 1 3.4803 -2.8738 5.0220 32 1 4.5127 -6.6719 5.4600 33 1 5.1384 -5.2860 4.4665 34 1 6.9239 -4.2027 5.7023 35 1 9.2616 -3.7775 5.0622 36 1 11.0968 -4.7962 6.3472 37 1 10.6012 -6.2330 8.2828 38 1 8.2676 -6.6568 8.9385 39 1 2.9420 -3.8563 7.2592 40 1 2.9648 -5.6653 7.4270 41 1 1.2461 -2.7958 0.9175 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12525224_10543058.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:44:44 Heat of formation + Delta-G solvation = 41.892109 kcal Electronic energy + Delta-G solvation = -24478.316178 eV Core-core repulsion = 20838.762099 eV Total energy + Delta-G solvation = -3639.554079 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.103 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.51825 -41.03227 -39.88884 -39.05793 -37.74530 -34.56680 -32.65625 -32.09576 -31.93883 -30.74425 -27.23503 -27.03829 -26.17848 -24.24816 -23.71484 -23.38111 -21.32881 -20.90305 -20.73425 -19.72070 -18.76570 -18.43152 -17.93966 -17.13964 -17.03774 -16.48491 -16.24342 -16.08317 -15.84835 -15.61713 -15.08525 -15.00466 -14.95391 -14.72382 -14.46736 -14.40056 -14.14613 -13.95773 -13.81479 -13.74324 -13.35200 -13.26093 -12.56378 -12.33094 -12.19210 -12.03970 -11.94592 -11.76217 -11.21516 -11.12911 -10.77741 -10.41995 -10.30743 -10.00149 -9.95037 -9.32423 -8.40868 -4.99498 0.20216 0.35398 0.37719 0.47173 1.27597 1.31237 1.50257 1.57516 1.83512 1.95022 1.96461 2.31298 2.70831 3.09738 3.11648 3.45508 3.50716 3.60770 3.72744 3.83666 3.91615 3.92228 4.04622 4.11696 4.24467 4.27792 4.39170 4.46364 4.47682 4.50945 4.56454 4.62844 4.71586 4.72721 4.80789 4.89088 4.96557 5.04779 5.23820 5.31358 5.37603 5.50938 5.58503 5.77279 5.88598 6.16076 6.33644 6.53752 7.05346 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.041 4.041 3 Si 0.680 3.320 4 C -0.165 4.165 5 C 0.040 3.960 6 N -0.536 5.536 7 C -0.061 4.061 8 C 0.595 3.405 9 O -0.519 6.519 10 N -0.718 5.718 11 C 0.127 3.873 12 H 0.117 0.883 13 C -0.136 4.136 14 C -0.108 4.108 15 H 0.109 0.891 16 S -0.102 6.102 17 C -0.083 4.083 18 C -0.133 4.133 19 C -0.101 4.101 20 C -0.125 4.125 21 C -0.100 4.100 22 C -0.102 4.102 23 C -0.115 4.115 24 C -0.071 4.071 25 H 0.377 0.623 26 H 0.074 0.926 27 H -0.262 1.262 28 H -0.255 1.255 29 H 0.176 0.824 30 H 0.418 0.582 31 H 0.394 0.606 32 H 0.108 0.892 33 H 0.079 0.921 34 H 0.121 0.879 35 H 0.125 0.875 36 H 0.126 0.874 37 H 0.129 0.871 38 H 0.128 0.872 39 H 0.086 0.914 40 H 0.109 0.891 41 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.644 4.006 0.642 6.167 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.151 4.151 3 Si 0.581 3.419 4 C -0.171 4.171 5 C -0.097 4.097 6 N -0.132 5.132 7 C -0.173 4.173 8 C 0.384 3.616 9 O -0.394 6.394 10 N -0.369 5.369 11 C 0.020 3.980 12 H 0.135 0.865 13 C -0.177 4.177 14 C -0.237 4.237 15 H 0.127 0.873 16 S 0.145 5.855 17 C -0.196 4.196 18 C -0.156 4.156 19 C -0.121 4.121 20 C -0.145 4.145 21 C -0.120 4.120 22 C -0.126 4.126 23 C -0.155 4.155 24 C -0.098 4.098 25 H 0.225 0.775 26 H 0.092 0.908 27 H -0.187 1.187 28 H -0.180 1.180 29 H 0.193 0.807 30 H 0.256 0.744 31 H 0.228 0.772 32 H 0.126 0.874 33 H 0.098 0.902 34 H 0.139 0.861 35 H 0.143 0.857 36 H 0.144 0.856 37 H 0.147 0.853 38 H 0.145 0.855 39 H 0.105 0.895 40 H 0.127 0.873 41 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 3.664 3.100 1.938 5.176 hybrid contribution 0.029 1.237 -0.917 1.540 sum 3.694 4.337 1.020 5.787 Atomic orbital electron populations 1.86622 1.18206 1.79932 1.49536 1.24058 0.83895 1.09965 0.97221 0.95456 0.91271 0.74662 0.80522 1.18700 1.06418 0.94228 0.97772 1.21815 1.03123 0.94542 0.90175 1.41869 1.44046 1.07853 1.19438 1.20312 1.11410 0.85997 0.99580 1.17017 0.77797 0.86746 0.80085 1.90887 1.46031 1.36163 1.66282 1.45540 1.58074 1.11558 1.21701 1.21793 0.98955 0.85867 0.91403 0.86529 1.23784 0.96806 1.01173 0.95960 1.25085 0.98371 1.01923 0.98330 0.87287 1.85574 0.95776 1.62792 1.41393 1.21755 0.97080 1.01529 0.99236 1.21148 0.97484 0.99950 0.97045 1.21098 0.92276 0.99205 0.99498 1.21249 0.99474 0.97870 0.95922 1.21153 0.96116 0.97816 0.96905 1.20813 0.91673 1.00224 0.99853 1.23187 0.91495 1.04725 0.96069 1.21221 0.98841 0.95740 0.93991 0.77497 0.90838 1.18678 1.17981 0.80661 0.74447 0.77213 0.87379 0.90219 0.86094 0.85681 0.85625 0.85333 0.85451 0.89496 0.87276 0.83183 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.89 12.86 -35.23 -0.45 -1.35 16 2 C -0.04 0.00 3.01 36.01 0.11 0.11 16 3 Si 0.68 -1.19 30.60 -169.99 -5.20 -6.40 16 4 C -0.16 -0.15 5.46 -105.02 -0.57 -0.73 16 5 C 0.04 -0.06 10.45 -16.91 -0.18 -0.24 16 6 N -0.54 1.24 5.99 -9.39 -0.06 1.18 16 7 C -0.06 -0.06 7.06 -81.98 -0.58 -0.64 16 8 C 0.60 1.15 7.79 -12.85 -0.10 1.05 16 9 O -0.52 -3.14 16.48 5.20 0.09 -3.05 16 10 N -0.72 1.20 5.26 -54.32 -0.29 0.91 16 11 C 0.13 -0.18 4.32 -67.12 -0.29 -0.47 16 12 H 0.12 0.03 7.46 -51.93 -0.39 -0.36 16 13 C -0.14 0.20 7.35 -25.92 -0.19 0.01 16 14 C -0.11 0.23 2.89 -25.92 -0.07 0.15 16 15 H 0.11 -0.33 6.88 -51.93 -0.36 -0.69 16 16 S -0.10 -0.04 21.72 -107.50 -2.33 -2.38 16 17 C -0.08 -0.11 6.11 -39.03 -0.24 -0.35 16 18 C -0.13 -0.06 9.32 -39.37 -0.37 -0.42 16 19 C -0.10 0.00 10.04 -39.61 -0.40 -0.40 16 20 C -0.12 0.00 10.04 -39.53 -0.40 -0.40 16 21 C -0.10 -0.03 10.04 -39.62 -0.40 -0.43 16 22 C -0.10 -0.12 9.79 -39.37 -0.39 -0.51 16 23 C -0.12 0.32 7.42 -25.91 -0.19 0.12 16 24 C -0.07 -0.18 10.59 -39.12 -0.41 -0.60 16 25 H 0.38 -0.90 8.74 45.56 0.40 -0.50 16 26 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 27 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 28 H -0.26 -0.25 7.11 56.52 0.40 0.16 16 29 H 0.18 -0.77 6.21 -52.49 -0.33 -1.10 16 30 H 0.42 -2.46 8.19 -40.82 -0.33 -2.79 16 31 H 0.39 -1.81 7.83 -40.82 -0.32 -2.13 16 32 H 0.11 -0.12 8.10 -51.93 -0.42 -0.54 16 33 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 34 H 0.12 -0.14 5.64 -52.48 -0.30 -0.44 16 35 H 0.13 -0.24 8.06 -52.49 -0.42 -0.66 16 36 H 0.13 -0.23 8.06 -52.49 -0.42 -0.65 16 37 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 38 H 0.13 0.03 8.06 -52.49 -0.42 -0.39 16 39 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 40 H 0.11 -0.29 8.10 -51.93 -0.42 -0.71 16 41 H 0.15 0.49 8.06 -52.49 -0.42 0.07 16 LS Contribution 360.49 15.07 5.43 5.43 Total: 0.00 -9.75 360.49 -12.51 -22.26 By element: Atomic # 1 Polarization: -7.85 SS G_CDS: -5.03 Total: -12.89 kcal Atomic # 6 Polarization: 0.93 SS G_CDS: -4.67 Total: -3.74 kcal Atomic # 7 Polarization: 2.44 SS G_CDS: -0.34 Total: 2.10 kcal Atomic # 8 Polarization: -4.03 SS G_CDS: -0.37 Total: -4.40 kcal Atomic # 14 Polarization: -1.19 SS G_CDS: -5.20 Total: -6.40 kcal Atomic # 16 Polarization: -0.04 SS G_CDS: -2.33 Total: -2.38 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -9.75 -12.51 -22.26 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525224_10543058.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.155 kcal (2) G-P(sol) polarization free energy of solvation -9.750 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.405 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.513 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.263 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.892 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds