Wall clock time and date at job start Sat Mar 6 2021 19:44:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.37655 * 125.67950 * 2 1 4 4 C 1.46681 * 126.23143 * 0.04113 * 3 2 1 5 5 O 1.21695 * 119.99790 * 354.59007 * 4 3 2 6 6 N 1.34776 * 119.99862 * 174.59253 * 4 3 2 7 7 C 1.46492 * 119.99794 * 185.04661 * 6 4 3 8 8 H 1.08996 * 112.85550 * 334.66362 * 7 6 4 9 9 C 1.53781 * 113.61526 * 105.86655 * 7 6 4 10 10 C 1.54054 * 86.98695 * 89.16022 * 9 7 6 11 11 H 1.09002 * 113.61005 * 270.88673 * 10 9 7 12 12 S 1.81397 * 113.69388 * 139.99339 * 10 9 7 13 13 C 1.76199 * 103.00225 * 87.46729 * 12 10 9 14 14 C 1.38980 * 120.07828 * 359.72560 * 13 12 10 15 15 C 1.38086 * 119.91561 * 179.76695 * 14 13 12 16 16 C 1.38305 * 120.07837 * 0.48414 * 15 14 13 17 17 C 1.38296 * 120.16570 * 359.76607 * 16 15 14 18 18 C 1.38090 * 120.07923 * 0.02562 * 17 16 15 19 19 C 1.53779 * 87.07543 * 25.43209 * 10 9 7 20 20 C 1.37871 * 107.53448 * 180.02562 * 3 2 1 21 21 C 1.39835 * 107.08396 * 0.02562 * 20 3 2 22 22 C 1.35456 * 107.86848 * 0.22797 * 21 20 3 23 23 C 1.50691 * 125.56500 * 179.77539 * 22 21 20 24 24 O 1.42904 * 109.47139 * 150.02282 * 23 22 21 25 25 Si 1.86302 * 109.47617 * 30.02291 * 23 22 21 26 26 H 1.09003 * 109.47289 * 95.83724 * 1 2 3 27 27 H 1.08999 * 109.47204 * 215.83720 * 1 2 3 28 28 H 1.08997 * 109.47127 * 335.84438 * 1 2 3 29 29 H 0.97004 * 119.99898 * 5.05150 * 6 4 3 30 30 H 1.09002 * 113.61473 * 203.66499 * 9 7 6 31 31 H 1.09005 * 113.61068 * 334.56753 * 9 7 6 32 32 H 1.07993 * 120.03956 * 359.97438 * 14 13 12 33 33 H 1.07999 * 119.95636 * 180.22482 * 15 14 13 34 34 H 1.08000 * 119.91548 * 179.74780 * 16 15 14 35 35 H 1.08002 * 119.96238 * 179.97438 * 17 16 15 36 36 H 1.07995 * 120.04208 * 179.97438 * 18 17 16 37 37 H 1.09000 * 113.61361 * 220.02208 * 19 10 9 38 38 H 1.08995 * 113.69049 * 89.13519 * 19 10 9 39 39 H 1.07994 * 126.46068 * 180.02562 * 20 3 2 40 40 H 1.08007 * 126.06924 * 179.97438 * 21 20 3 41 41 H 1.09010 * 109.47419 * 270.01832 * 23 22 21 42 42 H 0.96694 * 114.00423 * 300.00048 * 24 23 22 43 43 H 1.48498 * 109.99569 * 58.67946 * 25 23 22 44 44 H 1.48498 * 110.00398 * 179.97438 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2679 1.1182 0.0000 4 6 1.8124 2.5125 0.0008 5 8 0.6261 2.7651 -0.0977 6 7 2.7078 3.5138 0.1107 7 6 2.2467 4.8997 0.2229 8 1 1.2621 5.0553 -0.2180 9 6 2.3866 5.4828 1.6390 10 6 3.8017 5.9309 1.2267 11 1 4.5699 5.1815 1.4177 12 16 4.2538 7.5760 1.8428 13 6 4.9244 7.2324 3.4355 14 6 4.9824 5.9235 3.8993 15 6 5.5131 5.6575 5.1461 16 6 5.9773 6.6927 5.9370 17 6 5.9165 7.9969 5.4810 18 6 5.3911 8.2701 4.2335 19 6 3.2923 5.9349 -0.2242 20 6 3.5780 0.6888 -0.0006 21 6 3.5521 -0.7093 -0.0015 22 6 2.2554 -1.1010 -0.0066 23 6 1.7709 -2.5278 -0.0141 24 8 0.5109 -2.6065 0.6554 25 14 3.0088 -3.6089 0.8632 26 1 -0.3634 -0.1045 -1.0223 27 1 -0.3633 -0.8331 0.6017 28 1 -0.3633 0.9377 0.4205 29 1 3.6576 3.3167 0.1155 30 1 1.7072 6.3113 1.8391 31 1 2.3779 4.7275 2.4250 32 1 4.6159 5.1152 3.2840 33 1 5.5617 4.6403 5.5056 34 1 6.3881 6.4821 6.9134 35 1 6.2796 8.8028 6.1015 36 1 5.3435 9.2888 3.8782 37 1 4.0142 5.5445 -0.9415 38 1 2.8601 6.8864 -0.5340 39 1 4.4584 1.3143 -0.0004 40 1 4.4132 -1.3613 -0.0026 41 1 1.6570 -2.8676 -1.0437 42 1 0.5372 -2.3190 1.5782 43 1 3.1966 -3.1365 2.2585 44 1 2.5422 -5.0186 0.8632 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12525224_10803936.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:44:50 Heat of formation + Delta-G solvation = 45.914374 kcal Electronic energy + Delta-G solvation = -26901.959634 eV Core-core repulsion = 23107.042355 eV Total energy + Delta-G solvation = -3794.917279 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.119 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.64881 -41.04175 -39.85527 -39.07174 -37.98456 -34.75482 -33.60755 -32.07882 -31.90674 -31.36378 -27.70500 -27.35250 -27.02194 -25.99422 -23.74607 -23.58460 -23.20646 -21.69682 -20.81324 -20.48787 -18.94826 -18.72944 -18.33086 -17.76822 -17.02365 -16.97781 -16.56008 -16.37735 -16.09511 -15.88627 -15.72324 -15.44718 -15.14108 -14.93933 -14.90125 -14.44885 -14.40946 -14.31851 -14.14480 -13.86826 -13.80480 -13.72444 -13.25543 -13.18920 -12.98798 -12.38371 -12.29006 -12.15782 -11.99003 -11.98208 -11.73722 -11.22247 -11.10856 -10.82363 -10.74251 -10.24207 -9.96621 -9.77825 -9.14180 -8.37320 -5.02671 0.23626 0.35154 0.38809 0.51283 1.04716 1.34763 1.48425 1.61859 1.66185 1.90793 2.26807 2.31658 2.74194 3.01812 3.13410 3.15968 3.48429 3.51742 3.66414 3.69392 3.87649 3.95118 3.96043 4.14899 4.27372 4.32266 4.35281 4.39749 4.42492 4.46324 4.49594 4.51771 4.56609 4.61717 4.73491 4.75043 4.78422 4.86003 4.94937 5.00067 5.09011 5.27377 5.36968 5.40969 5.54173 5.64018 5.91954 5.92705 6.07890 6.15442 6.35798 7.09015 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.054 3.946 2 N -0.391 5.391 3 C -0.054 4.054 4 C 0.595 3.405 5 O -0.542 6.542 6 N -0.704 5.704 7 C 0.128 3.872 8 H 0.115 0.885 9 C -0.137 4.137 10 C -0.107 4.107 11 H 0.112 0.888 12 S -0.104 6.104 13 C -0.083 4.083 14 C -0.132 4.132 15 C -0.101 4.101 16 C -0.125 4.125 17 C -0.101 4.101 18 C -0.102 4.102 19 C -0.114 4.114 20 C -0.135 4.135 21 C -0.197 4.197 22 C 0.014 3.986 23 C -0.056 4.056 24 O -0.531 6.531 25 Si 0.719 3.281 26 H 0.075 0.925 27 H 0.099 0.901 28 H 0.101 0.899 29 H 0.404 0.596 30 H 0.107 0.893 31 H 0.079 0.921 32 H 0.122 0.878 33 H 0.125 0.875 34 H 0.125 0.875 35 H 0.128 0.872 36 H 0.127 0.873 37 H 0.089 0.911 38 H 0.108 0.892 39 H 0.146 0.854 40 H 0.154 0.846 41 H 0.124 0.876 42 H 0.378 0.622 43 H -0.257 1.257 44 H -0.254 1.254 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.238 -1.382 0.286 4.467 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 N -0.064 5.064 3 C -0.168 4.168 4 C 0.384 3.616 5 O -0.420 6.420 6 N -0.355 5.355 7 C 0.021 3.979 8 H 0.133 0.867 9 C -0.178 4.178 10 C -0.236 4.236 11 H 0.130 0.870 12 S 0.144 5.856 13 C -0.196 4.196 14 C -0.156 4.156 15 C -0.121 4.121 16 C -0.146 4.146 17 C -0.120 4.120 18 C -0.126 4.126 19 C -0.154 4.154 20 C -0.161 4.161 21 C -0.221 4.221 22 C -0.104 4.104 23 C -0.165 4.165 24 O -0.338 6.338 25 Si 0.617 3.383 26 H 0.094 0.906 27 H 0.118 0.882 28 H 0.119 0.881 29 H 0.239 0.761 30 H 0.125 0.875 31 H 0.097 0.903 32 H 0.140 0.860 33 H 0.143 0.857 34 H 0.143 0.857 35 H 0.146 0.854 36 H 0.145 0.855 37 H 0.107 0.893 38 H 0.127 0.873 39 H 0.164 0.836 40 H 0.171 0.829 41 H 0.142 0.858 42 H 0.226 0.774 43 H -0.181 1.181 44 H -0.179 1.179 Dipole moment (debyes) X Y Z Total from point charges 2.734 -0.865 -0.357 2.890 hybrid contribution -0.130 -0.713 1.340 1.524 sum 2.604 -1.578 0.983 3.199 Atomic orbital electron populations 1.22591 0.75549 1.06005 1.04533 1.43766 1.07013 1.04045 1.51535 1.19984 0.90573 0.87365 1.18915 1.16963 0.85487 0.83507 0.75655 1.90810 1.16326 1.84708 1.50163 1.45269 1.09784 1.05316 1.75163 1.21778 0.99568 0.79852 0.96721 0.86738 1.23840 0.94573 1.01598 0.97777 1.25138 1.00569 0.97367 1.00560 0.87029 1.85547 1.75409 1.12092 1.12602 1.21752 1.03060 0.96462 0.98296 1.21169 1.02168 0.94888 0.97345 1.21103 0.97633 0.99472 0.93870 1.21242 1.00325 0.92855 1.00130 1.21148 0.98418 0.97056 0.95415 1.20811 0.99390 0.98170 0.94219 1.23165 0.98270 1.00261 0.93696 1.21284 0.94281 0.95278 1.05285 1.20554 0.94949 0.95201 1.11394 1.21095 0.91079 0.89129 1.09078 1.24947 0.93123 0.94515 1.03951 1.86597 1.29789 1.88458 1.28972 0.94391 0.84826 0.77385 0.81676 0.90596 0.88235 0.88071 0.76067 0.87482 0.90282 0.85985 0.85688 0.85666 0.85365 0.85470 0.89271 0.87338 0.83614 0.82855 0.85796 0.77400 1.18126 1.17890 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.06 10.20 59.85 0.61 0.67 16 2 N -0.39 -0.67 3.16 -115.62 -0.37 -1.04 16 3 C -0.05 -0.09 6.89 -81.98 -0.56 -0.65 16 4 C 0.60 1.26 7.77 -12.85 -0.10 1.16 16 5 O -0.54 -2.86 14.21 5.19 0.07 -2.78 16 6 N -0.70 0.77 5.25 -54.33 -0.29 0.49 16 7 C 0.13 -0.16 4.33 -67.12 -0.29 -0.45 16 8 H 0.11 0.03 7.45 -51.93 -0.39 -0.35 16 9 C -0.14 0.17 7.38 -25.77 -0.19 -0.02 16 10 C -0.11 0.19 2.90 -25.78 -0.07 0.11 16 11 H 0.11 -0.28 6.88 -51.93 -0.36 -0.63 16 12 S -0.10 -0.07 21.73 -107.50 -2.34 -2.40 16 13 C -0.08 -0.14 6.11 -39.03 -0.24 -0.37 16 14 C -0.13 -0.11 9.32 -39.36 -0.37 -0.48 16 15 C -0.10 -0.05 10.04 -39.61 -0.40 -0.44 16 16 C -0.13 -0.05 10.04 -39.54 -0.40 -0.45 16 17 C -0.10 -0.06 10.04 -39.61 -0.40 -0.46 16 18 C -0.10 -0.15 9.79 -39.36 -0.39 -0.53 16 19 C -0.11 0.29 7.41 -25.92 -0.19 0.10 16 20 C -0.13 0.06 10.35 -39.12 -0.41 -0.34 16 21 C -0.20 0.15 9.37 -39.98 -0.37 -0.23 16 22 C 0.01 0.00 6.14 -81.95 -0.50 -0.50 16 23 C -0.06 0.06 2.99 36.00 0.11 0.17 16 24 O -0.53 0.09 10.12 -35.23 -0.36 -0.27 16 25 Si 0.72 -1.51 31.10 -169.99 -5.29 -6.80 16 26 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 27 H 0.10 -0.03 5.26 -51.93 -0.27 -0.30 16 28 H 0.10 0.24 6.11 -51.93 -0.32 -0.07 16 29 H 0.40 -1.39 7.61 -40.82 -0.31 -1.70 16 30 H 0.11 -0.10 8.11 -51.93 -0.42 -0.52 16 31 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 32 H 0.12 -0.08 5.64 -52.49 -0.30 -0.37 16 33 H 0.13 -0.17 8.06 -52.49 -0.42 -0.59 16 34 H 0.13 -0.18 8.06 -52.49 -0.42 -0.61 16 35 H 0.13 -0.17 8.06 -52.49 -0.42 -0.60 16 36 H 0.13 0.06 8.06 -52.49 -0.42 -0.36 16 37 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 38 H 0.11 -0.28 8.10 -51.93 -0.42 -0.70 16 39 H 0.15 -0.49 7.45 -52.49 -0.39 -0.88 16 40 H 0.15 -0.55 6.86 -52.48 -0.36 -0.91 16 41 H 0.12 -0.21 7.96 -51.92 -0.41 -0.63 16 42 H 0.38 -0.96 8.29 45.56 0.38 -0.58 16 43 H -0.26 -0.12 7.11 56.52 0.40 0.28 16 44 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 LS Contribution 373.23 15.07 5.62 5.62 Total: 0.00 -7.97 373.23 -12.82 -20.79 By element: Atomic # 1 Polarization: -5.18 SS G_CDS: -5.73 Total: -10.90 kcal Atomic # 6 Polarization: 1.45 SS G_CDS: -4.16 Total: -2.71 kcal Atomic # 7 Polarization: 0.10 SS G_CDS: -0.65 Total: -0.55 kcal Atomic # 8 Polarization: -2.77 SS G_CDS: -0.28 Total: -3.05 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: -5.29 Total: -6.80 kcal Atomic # 16 Polarization: -0.07 SS G_CDS: -2.34 Total: -2.40 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -7.97 -12.82 -20.79 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525224_10803936.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.706 kcal (2) G-P(sol) polarization free energy of solvation -7.974 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.732 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.817 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.792 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.914 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds