Wall clock time and date at job start Sat Mar 6 2021 19:45:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.47188 * 2 1 4 4 C 1.50698 * 109.47241 * 239.99860 * 2 1 3 5 5 C 1.38635 * 119.93927 * 74.99974 * 4 2 1 6 6 F 1.35100 * 119.88184 * 359.72882 * 5 4 2 7 7 C 1.38672 * 120.23906 * 180.02562 * 5 4 2 8 8 C 1.37816 * 120.12044 * 359.97438 * 7 5 4 9 9 C 1.39664 * 119.87704 * 0.02616 * 8 7 5 10 10 C 1.47731 * 120.11864 * 179.97438 * 9 8 7 11 11 O 1.21567 * 120.00105 * 180.02562 * 10 9 8 12 12 N 1.34771 * 119.99754 * 0.02562 * 10 9 8 13 13 C 1.46504 * 119.99903 * 180.02562 * 12 10 9 14 14 H 1.09000 * 112.85066 * 25.33477 * 13 12 10 15 15 C 1.53788 * 113.61455 * 156.52715 * 13 12 10 16 16 C 1.53787 * 87.07796 * 89.11526 * 15 13 12 17 17 H 1.08998 * 113.61561 * 270.88288 * 16 15 13 18 18 S 1.81398 * 113.61178 * 140.06533 * 16 15 13 19 19 C 1.76196 * 103.00133 * 174.99922 * 18 16 15 20 20 C 1.38983 * 120.07812 * 359.72882 * 19 18 16 21 21 C 1.38085 * 119.91755 * 179.67593 * 20 19 18 22 22 C 1.38306 * 120.07867 * 0.61644 * 21 20 19 23 23 C 1.38307 * 120.16018 * 359.67969 * 22 21 20 24 24 C 1.38081 * 120.08121 * 359.97438 * 23 22 21 25 25 C 1.53781 * 113.61415 * 254.13498 * 13 12 10 26 26 C 1.37850 * 119.94260 * 255.02161 * 4 2 1 27 27 H 0.96698 * 113.99842 * 59.99490 * 1 2 3 28 28 H 1.09004 * 109.47289 * 119.99724 * 2 1 3 29 29 H 1.48494 * 110.00186 * 298.68136 * 3 2 1 30 30 H 1.48501 * 110.00025 * 60.00018 * 3 2 1 31 31 H 1.08001 * 119.93903 * 180.02562 * 7 5 4 32 32 H 1.08003 * 120.06216 * 179.97438 * 8 7 5 33 33 H 0.97003 * 120.00510 * 359.97438 * 12 10 9 34 34 H 1.08994 * 113.61458 * 203.66702 * 15 13 12 35 35 H 1.09001 * 113.61229 * 334.56976 * 15 13 12 36 36 H 1.07997 * 120.03631 * 359.97438 * 20 19 18 37 37 H 1.07998 * 119.95785 * 180.31954 * 21 20 19 38 38 H 1.08000 * 119.92035 * 179.70103 * 22 21 20 39 39 H 1.07995 * 119.95790 * 180.02562 * 23 22 21 40 40 H 1.07996 * 120.04054 * 180.02562 * 24 23 22 41 41 H 1.08997 * 113.61447 * 25.43281 * 25 13 12 42 42 H 1.08996 * 113.61344 * 156.33506 * 25 13 12 43 43 H 1.08000 * 120.06265 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.8689 -0.0835 -2.4653 6 9 1.3524 1.1611 -2.5630 7 6 2.3289 -0.7317 -3.6017 8 6 2.8515 -2.0035 -3.5086 9 6 2.9168 -2.6397 -2.2670 10 6 3.4755 -4.0032 -2.1612 11 8 3.5309 -4.5552 -1.0795 12 7 3.9237 -4.6352 -3.2640 13 6 4.4772 -5.9876 -3.1592 14 1 4.0950 -6.5358 -2.2981 15 6 4.4132 -6.7830 -4.4738 16 6 5.7908 -6.1876 -4.8095 17 1 5.7381 -5.2361 -5.3386 18 16 6.9210 -7.3690 -5.5954 19 6 8.3236 -6.3764 -5.9853 20 6 8.3278 -5.0226 -5.6713 21 6 9.4315 -4.2492 -5.9723 22 6 10.5266 -4.8177 -6.5971 23 6 10.5234 -6.1633 -6.9167 24 6 9.4262 -6.9443 -6.6122 25 6 6.0085 -6.0384 -3.2917 26 6 2.4518 -1.9826 -1.1261 27 1 -0.3933 0.4418 -0.7650 28 1 1.7924 -0.5138 0.8900 29 1 1.5880 2.4586 -1.2242 30 1 1.5615 2.4679 1.2085 31 1 2.2782 -0.2386 -4.5612 32 1 3.2091 -2.5076 -4.3943 33 1 3.8792 -4.1949 -4.1272 34 1 4.4274 -7.8635 -4.3315 35 1 3.6200 -6.4538 -5.1451 36 1 7.4709 -4.5770 -5.1880 37 1 9.4376 -3.1982 -5.7239 38 1 11.3866 -4.2094 -6.8357 39 1 11.3805 -6.6039 -7.4041 40 1 9.4246 -7.9951 -6.8617 41 1 6.5023 -5.1087 -3.0094 42 1 6.4580 -6.9158 -2.8268 43 1 2.5001 -2.4702 -0.1636 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12525224_12496548.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:45:51 Heat of formation + Delta-G solvation = -12.675076 kcal Electronic energy + Delta-G solvation = -28222.930386 eV Core-core repulsion = 24048.755891 eV Total energy + Delta-G solvation = -4174.174495 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.098 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -50.53063 -41.72311 -40.39235 -39.87245 -39.04486 -37.79678 -34.71067 -32.93178 -32.14578 -31.95316 -31.89065 -27.26129 -27.07146 -26.81841 -24.91358 -23.72702 -23.66412 -23.43422 -21.79543 -20.86579 -19.40154 -19.03310 -18.73746 -18.08267 -17.97178 -17.73353 -17.21367 -16.94989 -16.55671 -16.30437 -16.06922 -16.00914 -15.81203 -15.64265 -15.18232 -15.14375 -14.97643 -14.72875 -14.48029 -14.24057 -14.15386 -13.90329 -13.79550 -13.73765 -13.41926 -13.27222 -13.02675 -12.41566 -12.32369 -12.18935 -12.03137 -11.77338 -11.31858 -11.20936 -11.12913 -10.89166 -10.77324 -10.34028 -10.25361 -9.99261 -9.94572 -8.40218 -4.98172 -0.63818 -0.13627 0.21051 0.36287 0.47858 1.17208 1.31853 1.48714 1.60320 1.80315 1.98127 2.43640 2.71676 2.83935 3.09053 3.10753 3.14744 3.35409 3.37212 3.42138 3.52630 3.61468 3.73245 3.84704 3.93175 3.97094 4.12519 4.18961 4.27665 4.39990 4.44787 4.46413 4.49141 4.52884 4.56484 4.62457 4.68906 4.72129 4.72906 4.80530 4.85926 4.95202 4.97455 5.24623 5.29812 5.38475 5.44220 5.51822 5.89439 6.21738 6.24629 6.98370 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.523 6.523 2 C -0.074 4.074 3 Si 0.675 3.325 4 C -0.151 4.151 5 C 0.120 3.880 6 F -0.122 7.122 7 C -0.152 4.152 8 C -0.055 4.055 9 C -0.144 4.144 10 C 0.566 3.434 11 O -0.524 6.524 12 N -0.711 5.711 13 C 0.126 3.874 14 H 0.115 0.885 15 C -0.115 4.115 16 C -0.109 4.109 17 H 0.110 0.890 18 S -0.103 6.103 19 C -0.083 4.083 20 C -0.132 4.132 21 C -0.101 4.101 22 C -0.125 4.125 23 C -0.100 4.100 24 C -0.102 4.102 25 C -0.136 4.136 26 C -0.008 4.008 27 H 0.375 0.625 28 H 0.125 0.875 29 H -0.231 1.231 30 H -0.259 1.259 31 H 0.147 0.853 32 H 0.137 0.863 33 H 0.400 0.600 34 H 0.109 0.891 35 H 0.088 0.912 36 H 0.122 0.878 37 H 0.125 0.875 38 H 0.126 0.874 39 H 0.129 0.871 40 H 0.127 0.873 41 H 0.080 0.920 42 H 0.107 0.893 43 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.650 1.035 -4.121 5.008 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.329 6.329 2 C -0.183 4.183 3 Si 0.574 3.426 4 C -0.152 4.152 5 C 0.101 3.899 6 F -0.101 7.101 7 C -0.171 4.171 8 C -0.074 4.074 9 C -0.148 4.148 10 C 0.353 3.647 11 O -0.400 6.400 12 N -0.363 5.363 13 C 0.019 3.981 14 H 0.133 0.867 15 C -0.154 4.154 16 C -0.238 4.238 17 H 0.128 0.872 18 S 0.144 5.856 19 C -0.196 4.196 20 C -0.156 4.156 21 C -0.121 4.121 22 C -0.145 4.145 23 C -0.120 4.120 24 C -0.126 4.126 25 C -0.177 4.177 26 C -0.027 4.027 27 H 0.223 0.777 28 H 0.143 0.857 29 H -0.155 1.155 30 H -0.184 1.184 31 H 0.165 0.835 32 H 0.155 0.845 33 H 0.236 0.764 34 H 0.127 0.873 35 H 0.106 0.894 36 H 0.140 0.860 37 H 0.143 0.857 38 H 0.144 0.856 39 H 0.146 0.854 40 H 0.145 0.855 41 H 0.098 0.902 42 H 0.126 0.874 43 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 2.245 -0.025 -2.973 3.726 hybrid contribution -0.811 1.608 -1.020 2.070 sum 1.434 1.584 -3.993 4.528 Atomic orbital electron populations 1.86662 1.17071 1.79895 1.49287 1.24997 0.84311 1.11468 0.97533 0.95456 0.91433 0.74650 0.81060 1.20278 1.04052 0.96382 0.94505 1.17914 0.97093 0.80524 0.94387 1.91581 1.84206 1.37872 1.96412 1.21097 1.01796 0.95927 0.98269 1.21162 0.95683 0.93826 0.96733 1.19958 1.05119 0.95197 0.94501 1.18097 0.77267 0.85233 0.84072 1.90834 1.55270 1.66888 1.27021 1.45573 1.63585 1.16723 1.10417 1.21813 0.93922 0.82942 0.99467 0.86668 1.23175 0.94155 1.01584 0.96528 1.25145 0.98174 1.01326 0.99117 0.87154 1.85569 1.10481 1.15919 1.73627 1.21750 0.98361 0.96619 1.02866 1.21156 0.99447 0.92561 1.02440 1.21101 0.93187 0.99830 0.97947 1.21249 0.98685 0.95352 0.99237 1.21153 0.97855 0.94000 0.99003 1.20810 0.92418 1.00143 0.99203 1.23824 0.96737 1.04354 0.92762 1.21048 0.91231 0.91288 0.99136 0.77688 0.85714 1.15450 1.18389 0.83525 0.84512 0.76393 0.87292 0.89384 0.86027 0.85664 0.85643 0.85355 0.85470 0.90167 0.87425 0.83106 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.83 12.88 -35.23 -0.45 -1.28 16 2 C -0.07 0.01 2.80 36.00 0.10 0.12 16 3 Si 0.67 -0.36 30.81 -169.99 -5.24 -5.59 16 4 C -0.15 0.07 4.78 -104.62 -0.50 -0.43 16 5 C 0.12 -0.09 6.62 -39.27 -0.26 -0.35 16 6 F -0.12 -0.05 12.57 2.25 0.03 -0.02 16 7 C -0.15 0.37 10.01 -39.58 -0.40 -0.02 16 8 C -0.06 0.17 9.54 -39.20 -0.37 -0.20 16 9 C -0.14 0.13 5.87 -104.96 -0.62 -0.48 16 10 C 0.57 0.20 7.77 -12.38 -0.10 0.11 16 11 O -0.52 -2.22 15.96 5.31 0.08 -2.13 16 12 N -0.71 1.80 5.21 -53.99 -0.28 1.51 16 13 C 0.13 -0.27 4.30 -67.11 -0.29 -0.56 16 14 H 0.12 -0.07 7.50 -51.93 -0.39 -0.46 16 15 C -0.11 0.38 7.41 -25.91 -0.19 0.18 16 16 C -0.11 0.27 2.90 -25.77 -0.07 0.19 16 17 H 0.11 -0.37 6.85 -51.93 -0.36 -0.73 16 18 S -0.10 -0.02 21.73 -107.50 -2.34 -2.35 16 19 C -0.08 -0.09 6.11 -39.03 -0.24 -0.33 16 20 C -0.13 -0.03 9.32 -39.36 -0.37 -0.40 16 21 C -0.10 0.01 10.04 -39.61 -0.40 -0.39 16 22 C -0.12 0.01 10.04 -39.53 -0.40 -0.39 16 23 C -0.10 -0.02 10.04 -39.61 -0.40 -0.42 16 24 C -0.10 -0.11 9.79 -39.37 -0.39 -0.49 16 25 C -0.14 0.28 7.40 -25.78 -0.19 0.08 16 26 C -0.01 0.00 9.21 -39.20 -0.36 -0.36 16 27 H 0.38 -0.35 8.39 45.56 0.38 0.04 16 28 H 0.12 -0.15 7.77 -51.93 -0.40 -0.55 16 29 H -0.23 -0.30 5.28 56.52 0.30 0.00 16 30 H -0.26 -0.72 7.11 56.52 0.40 -0.32 16 31 H 0.15 -0.63 8.06 -52.49 -0.42 -1.05 16 32 H 0.14 -0.85 6.40 -52.48 -0.34 -1.19 16 33 H 0.40 -2.07 6.73 -40.82 -0.27 -2.35 16 34 H 0.11 -0.34 8.10 -51.93 -0.42 -0.76 16 35 H 0.09 -0.37 8.14 -51.93 -0.42 -0.79 16 36 H 0.12 -0.18 5.64 -52.49 -0.30 -0.47 16 37 H 0.13 -0.25 8.06 -52.49 -0.42 -0.68 16 38 H 0.13 -0.24 8.06 -52.49 -0.42 -0.66 16 39 H 0.13 -0.22 8.06 -52.49 -0.42 -0.64 16 40 H 0.13 0.01 8.06 -52.49 -0.42 -0.41 16 41 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 42 H 0.11 -0.17 8.11 -51.93 -0.42 -0.59 16 43 H 0.15 0.00 7.58 -52.49 -0.40 -0.40 16 LS Contribution 375.15 15.07 5.65 5.65 Total: 0.00 -7.74 375.15 -13.15 -20.89 By element: Atomic # 1 Polarization: -7.38 SS G_CDS: -5.17 Total: -12.55 kcal Atomic # 6 Polarization: 1.30 SS G_CDS: -5.43 Total: -4.13 kcal Atomic # 7 Polarization: 1.80 SS G_CDS: -0.28 Total: 1.51 kcal Atomic # 8 Polarization: -3.04 SS G_CDS: -0.37 Total: -3.41 kcal Atomic # 9 Polarization: -0.05 SS G_CDS: 0.03 Total: -0.02 kcal Atomic # 14 Polarization: -0.36 SS G_CDS: -5.24 Total: -5.59 kcal Atomic # 16 Polarization: -0.02 SS G_CDS: -2.34 Total: -2.35 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -7.74 -13.15 -20.89 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525224_12496548.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.214 kcal (2) G-P(sol) polarization free energy of solvation -7.742 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.472 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.147 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.889 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.675 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds