Wall clock time and date at job start Sat Mar 6 2021 19:45:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.47188 * 2 1 4 4 C 1.50698 * 109.47241 * 239.99860 * 2 1 3 5 5 C 1.38635 * 119.93927 * 74.99974 * 4 2 1 6 6 F 1.35100 * 119.88184 * 359.72882 * 5 4 2 7 7 C 1.38672 * 120.23906 * 180.02562 * 5 4 2 8 8 C 1.37816 * 120.12044 * 359.97438 * 7 5 4 9 9 C 1.39664 * 119.87704 * 0.02616 * 8 7 5 10 10 C 1.47731 * 120.11864 * 179.97438 * 9 8 7 11 11 O 1.21567 * 120.00105 * 180.02562 * 10 9 8 12 12 N 1.34771 * 119.99754 * 0.02562 * 10 9 8 13 13 C 1.46504 * 119.99903 * 180.02562 * 12 10 9 14 14 H 1.09000 * 112.85066 * 25.33477 * 13 12 10 15 15 C 1.53788 * 113.61455 * 156.52715 * 13 12 10 16 16 C 1.53787 * 87.07796 * 89.11526 * 15 13 12 17 17 H 1.08998 * 113.61561 * 270.88288 * 16 15 13 18 18 S 1.81398 * 113.61178 * 140.06533 * 16 15 13 19 19 C 1.76196 * 103.00133 * 174.99922 * 18 16 15 20 20 C 1.38983 * 120.07812 * 359.72882 * 19 18 16 21 21 C 1.38085 * 119.91755 * 179.67593 * 20 19 18 22 22 C 1.38306 * 120.07867 * 0.61644 * 21 20 19 23 23 C 1.38307 * 120.16018 * 359.67969 * 22 21 20 24 24 C 1.38081 * 120.08121 * 359.97438 * 23 22 21 25 25 C 1.53781 * 113.61415 * 254.13498 * 13 12 10 26 26 C 1.37850 * 119.94260 * 255.02161 * 4 2 1 27 27 H 0.96698 * 113.99842 * 59.99490 * 1 2 3 28 28 H 1.09004 * 109.47289 * 119.99724 * 2 1 3 29 29 H 1.48494 * 110.00186 * 298.68136 * 3 2 1 30 30 H 1.48501 * 110.00025 * 60.00018 * 3 2 1 31 31 H 1.08001 * 119.93903 * 180.02562 * 7 5 4 32 32 H 1.08003 * 120.06216 * 179.97438 * 8 7 5 33 33 H 0.97003 * 120.00510 * 359.97438 * 12 10 9 34 34 H 1.08994 * 113.61458 * 203.66702 * 15 13 12 35 35 H 1.09001 * 113.61229 * 334.56976 * 15 13 12 36 36 H 1.07997 * 120.03631 * 359.97438 * 20 19 18 37 37 H 1.07998 * 119.95785 * 180.31954 * 21 20 19 38 38 H 1.08000 * 119.92035 * 179.70103 * 22 21 20 39 39 H 1.07995 * 119.95790 * 180.02562 * 23 22 21 40 40 H 1.07996 * 120.04054 * 180.02562 * 24 23 22 41 41 H 1.08997 * 113.61447 * 25.43281 * 25 13 12 42 42 H 1.08996 * 113.61344 * 156.33506 * 25 13 12 43 43 H 1.08000 * 120.06265 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.8689 -0.0835 -2.4653 6 9 1.3524 1.1611 -2.5630 7 6 2.3289 -0.7317 -3.6017 8 6 2.8515 -2.0035 -3.5086 9 6 2.9168 -2.6397 -2.2670 10 6 3.4755 -4.0032 -2.1612 11 8 3.5309 -4.5552 -1.0795 12 7 3.9237 -4.6352 -3.2640 13 6 4.4772 -5.9876 -3.1592 14 1 4.0950 -6.5358 -2.2981 15 6 4.4132 -6.7830 -4.4738 16 6 5.7908 -6.1876 -4.8095 17 1 5.7381 -5.2361 -5.3386 18 16 6.9210 -7.3690 -5.5954 19 6 8.3236 -6.3764 -5.9853 20 6 8.3278 -5.0226 -5.6713 21 6 9.4315 -4.2492 -5.9723 22 6 10.5266 -4.8177 -6.5971 23 6 10.5234 -6.1633 -6.9167 24 6 9.4262 -6.9443 -6.6122 25 6 6.0085 -6.0384 -3.2917 26 6 2.4518 -1.9826 -1.1261 27 1 -0.3933 0.4418 -0.7650 28 1 1.7924 -0.5138 0.8900 29 1 1.5880 2.4586 -1.2242 30 1 1.5615 2.4679 1.2085 31 1 2.2782 -0.2386 -4.5612 32 1 3.2091 -2.5076 -4.3943 33 1 3.8792 -4.1949 -4.1272 34 1 4.4274 -7.8635 -4.3315 35 1 3.6200 -6.4538 -5.1451 36 1 7.4709 -4.5770 -5.1880 37 1 9.4376 -3.1982 -5.7239 38 1 11.3866 -4.2094 -6.8357 39 1 11.3805 -6.6039 -7.4041 40 1 9.4246 -7.9951 -6.8617 41 1 6.5023 -5.1087 -3.0094 42 1 6.4580 -6.9158 -2.8268 43 1 2.5001 -2.4702 -0.1636 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12525224_12496548.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:45:50 Heat of formation + Delta-G solvation = -7.708970 kcal Electronic energy + Delta-G solvation = -28222.715039 eV Core-core repulsion = 24048.755891 eV Total energy + Delta-G solvation = -4173.959148 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.098 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -50.47870 -41.65385 -40.26723 -39.81457 -39.02808 -37.81416 -34.66857 -32.82438 -32.07790 -31.89116 -31.79700 -27.18304 -26.89493 -26.69636 -24.82404 -23.67593 -23.54750 -23.37575 -21.72473 -20.74783 -19.32547 -18.94524 -18.66912 -18.05174 -17.90750 -17.65299 -17.15578 -16.88168 -16.46373 -16.25732 -16.04400 -15.94386 -15.76434 -15.61910 -15.08766 -15.00083 -14.89448 -14.66845 -14.39282 -14.17104 -14.04780 -13.87948 -13.80638 -13.59598 -13.35572 -13.17694 -12.97135 -12.37261 -12.23226 -12.07934 -11.86785 -11.66499 -11.37251 -11.25679 -11.05095 -10.88154 -10.72532 -10.27949 -10.13469 -9.95907 -9.84181 -8.38172 -4.98032 -0.53527 0.01129 0.23863 0.39544 0.55567 1.18649 1.40527 1.53727 1.57597 1.89498 1.95911 2.53306 2.75143 2.96082 3.22071 3.26469 3.29960 3.43951 3.50192 3.58932 3.68493 3.80415 3.92873 3.95660 4.02295 4.10097 4.22868 4.30310 4.44926 4.48868 4.54995 4.60458 4.66462 4.69269 4.75816 4.76341 4.78674 4.88477 4.89256 4.94602 4.99365 5.04601 5.08435 5.28497 5.43243 5.43864 5.56188 5.58585 5.96125 6.29867 6.38171 7.06876 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.083 4.083 3 Si 0.750 3.250 4 C -0.155 4.155 5 C 0.109 3.891 6 F -0.131 7.131 7 C -0.147 4.147 8 C -0.039 4.039 9 C -0.152 4.152 10 C 0.565 3.435 11 O -0.571 6.571 12 N -0.693 5.693 13 C 0.125 3.875 14 H 0.097 0.903 15 C -0.104 4.104 16 C -0.095 4.095 17 H 0.127 0.873 18 S -0.133 6.133 19 C -0.097 4.097 20 C -0.139 4.139 21 C -0.108 4.108 22 C -0.134 4.134 23 C -0.110 4.110 24 C -0.122 4.122 25 C -0.135 4.135 26 C -0.020 4.020 27 H 0.384 0.616 28 H 0.130 0.870 29 H -0.252 1.252 30 H -0.308 1.308 31 H 0.171 0.829 32 H 0.175 0.825 33 H 0.416 0.584 34 H 0.107 0.893 35 H 0.106 0.894 36 H 0.137 0.863 37 H 0.145 0.855 38 H 0.142 0.858 39 H 0.142 0.858 40 H 0.127 0.873 41 H 0.078 0.922 42 H 0.099 0.901 43 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.950 1.604 -6.056 6.925 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.192 4.192 3 Si 0.653 3.347 4 C -0.156 4.156 5 C 0.090 3.910 6 F -0.109 7.109 7 C -0.165 4.165 8 C -0.057 4.057 9 C -0.155 4.155 10 C 0.354 3.646 11 O -0.451 6.451 12 N -0.346 5.346 13 C 0.018 3.982 14 H 0.115 0.885 15 C -0.144 4.144 16 C -0.224 4.224 17 H 0.145 0.855 18 S 0.114 5.886 19 C -0.209 4.209 20 C -0.163 4.163 21 C -0.128 4.128 22 C -0.154 4.154 23 C -0.129 4.129 24 C -0.145 4.145 25 C -0.175 4.175 26 C -0.039 4.039 27 H 0.233 0.767 28 H 0.148 0.852 29 H -0.177 1.177 30 H -0.236 1.236 31 H 0.189 0.811 32 H 0.192 0.808 33 H 0.255 0.745 34 H 0.125 0.875 35 H 0.124 0.876 36 H 0.155 0.845 37 H 0.163 0.837 38 H 0.160 0.840 39 H 0.160 0.840 40 H 0.145 0.855 41 H 0.096 0.904 42 H 0.117 0.883 43 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 2.563 0.532 -4.966 5.614 hybrid contribution -0.907 1.432 -0.416 1.746 sum 1.656 1.964 -5.382 5.964 Atomic orbital electron populations 1.86626 1.18161 1.80262 1.50081 1.25162 0.83578 1.12096 0.98333 0.94652 0.90261 0.72757 0.77012 1.20136 1.04610 0.96356 0.94535 1.18131 0.97571 0.80389 0.94924 1.91556 1.84459 1.38468 1.96435 1.21401 1.00620 0.95949 0.98551 1.21501 0.94011 0.93363 0.96873 1.19939 1.05586 0.94699 0.95294 1.18317 0.76837 0.85564 0.83908 1.90816 1.57405 1.68025 1.28887 1.45419 1.62281 1.16375 1.10494 1.21736 0.93774 0.83117 0.99582 0.88480 1.23146 0.94104 1.01369 0.95775 1.25204 0.97569 1.01341 0.98296 0.85499 1.85649 1.11311 1.17601 1.74039 1.21908 0.98575 0.97214 1.03246 1.21395 1.00214 0.92277 1.02398 1.21420 0.92977 1.00857 0.97533 1.21549 0.99417 0.95446 0.99036 1.21403 0.98115 0.94377 0.99041 1.20997 0.93078 1.00489 0.99984 1.23778 0.96611 1.03924 0.93230 1.21025 0.92049 0.91557 0.99313 0.76735 0.85212 1.17732 1.23609 0.81125 0.80822 0.74470 0.87453 0.87585 0.84511 0.83743 0.83988 0.83993 0.85498 0.90363 0.88253 0.84218 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.33 12.88 -148.98 -1.92 -4.25 16 2 C -0.08 -0.05 2.80 71.24 0.20 0.15 16 3 Si 0.75 -0.08 30.81 68.60 2.11 2.03 16 4 C -0.16 0.10 4.78 -19.86 -0.09 0.00 16 5 C 0.11 -0.24 6.62 22.47 0.15 -0.09 16 6 F -0.13 -0.06 12.57 44.97 0.57 0.51 16 7 C -0.15 1.06 10.01 22.27 0.22 1.28 16 8 C -0.04 0.35 9.54 22.51 0.21 0.56 16 9 C -0.15 0.39 5.87 -20.09 -0.12 0.27 16 10 C 0.57 0.30 7.77 86.75 0.67 0.98 16 11 O -0.57 -5.59 15.96 -3.93 -0.06 -5.65 16 12 N -0.69 4.44 5.21 -443.00 -2.31 2.13 16 13 C 0.13 -0.59 4.30 45.52 0.20 -0.40 16 14 H 0.10 -0.02 7.50 -2.39 -0.02 -0.04 16 15 C -0.10 0.81 7.41 31.12 0.23 1.04 16 16 C -0.10 0.58 2.90 31.21 0.09 0.67 16 17 H 0.13 -1.17 6.85 -2.39 -0.02 -1.18 16 18 S -0.13 -0.05 21.73 -56.49 -1.23 -1.28 16 19 C -0.10 -0.22 6.11 22.62 0.14 -0.09 16 20 C -0.14 0.05 9.32 22.41 0.21 0.26 16 21 C -0.11 0.14 10.04 22.25 0.22 0.36 16 22 C -0.13 0.11 10.04 22.30 0.22 0.33 16 23 C -0.11 -0.05 10.04 22.25 0.22 0.17 16 24 C -0.12 -0.33 9.79 22.41 0.22 -0.11 16 25 C -0.13 0.58 7.40 31.21 0.23 0.81 16 26 C -0.02 0.00 9.21 22.51 0.21 0.20 16 27 H 0.38 -0.31 8.39 -74.06 -0.62 -0.94 16 28 H 0.13 -0.14 7.77 -2.38 -0.02 -0.16 16 29 H -0.25 -0.80 5.28 99.48 0.52 -0.28 16 30 H -0.31 -2.41 7.11 99.48 0.71 -1.71 16 31 H 0.17 -2.04 8.06 -2.91 -0.02 -2.06 16 32 H 0.17 -2.92 6.40 -2.91 -0.02 -2.94 16 33 H 0.42 -5.52 6.73 -92.71 -0.62 -6.15 16 34 H 0.11 -0.73 8.10 -2.39 -0.02 -0.75 16 35 H 0.11 -1.15 8.14 -2.39 -0.02 -1.17 16 36 H 0.14 -0.62 5.64 -2.91 -0.02 -0.64 16 37 H 0.14 -0.85 8.06 -2.91 -0.02 -0.87 16 38 H 0.14 -0.70 8.06 -2.91 -0.02 -0.72 16 39 H 0.14 -0.49 8.06 -2.91 -0.02 -0.51 16 40 H 0.13 0.19 8.06 -2.91 -0.02 0.17 16 41 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 42 H 0.10 -0.23 8.11 -2.39 -0.02 -0.25 16 43 H 0.14 0.27 7.58 -2.91 -0.02 0.25 16 Total: 0.00 -20.62 375.15 0.28 -20.34 By element: Atomic # 1 Polarization: -19.93 SS G_CDS: -0.32 Total: -20.25 kcal Atomic # 6 Polarization: 2.97 SS G_CDS: 3.44 Total: 6.41 kcal Atomic # 7 Polarization: 4.44 SS G_CDS: -2.31 Total: 2.13 kcal Atomic # 8 Polarization: -7.92 SS G_CDS: -1.98 Total: -9.90 kcal Atomic # 9 Polarization: -0.06 SS G_CDS: 0.57 Total: 0.51 kcal Atomic # 14 Polarization: -0.08 SS G_CDS: 2.11 Total: 2.03 kcal Atomic # 16 Polarization: -0.05 SS G_CDS: -1.23 Total: -1.28 kcal Total: -20.62 0.28 -20.34 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525224_12496548.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.634 kcal (2) G-P(sol) polarization free energy of solvation -20.624 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.990 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.281 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.343 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.709 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds