Wall clock time and date at job start Sat Mar 6 2021 19:46:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.39291 * 121.02908 * 2 1 4 4 C 1.46494 * 134.20414 * 359.84912 * 3 2 1 5 5 C 1.50701 * 126.59564 * 0.38309 * 4 3 2 6 6 O 1.42897 * 109.47435 * 74.99684 * 5 4 3 7 7 Si 1.86299 * 109.47129 * 195.00138 * 5 4 3 8 8 C 1.34177 * 106.80515 * 180.40556 * 4 3 2 9 9 N 1.36952 * 109.95219 * 359.97438 * 8 4 3 10 10 C 1.37161 * 110.10865 * 0.02562 * 9 8 4 11 11 N 1.32821 * 132.95683 * 179.97438 * 10 9 8 12 12 C 1.31310 * 121.88590 * 180.02562 * 11 10 9 13 13 C 1.39748 * 121.03402 * 179.72832 * 2 1 3 14 14 C 1.47665 * 120.44861 * 0.02562 * 13 2 1 15 15 O 1.21573 * 120.00573 * 353.76534 * 14 13 2 16 16 N 1.34782 * 119.99639 * 173.76220 * 14 13 2 17 17 C 1.46503 * 119.99855 * 179.97438 * 16 14 13 18 18 H 1.09004 * 112.90744 * 23.75454 * 17 16 14 19 19 C 1.53786 * 113.61234 * 155.00184 * 17 16 14 20 20 C 1.53780 * 87.07682 * 89.11631 * 19 17 16 21 21 H 1.08988 * 113.61979 * 270.79790 * 20 19 17 22 22 S 1.81406 * 113.60895 * 139.97853 * 20 19 17 23 23 C 1.76203 * 102.99863 * 176.53032 * 22 20 19 24 24 C 1.38973 * 120.07975 * 180.02562 * 23 22 20 25 25 C 1.38084 * 119.91820 * 179.74343 * 24 23 22 26 26 C 1.38298 * 120.07872 * 0.23890 * 25 24 23 27 27 C 1.38299 * 120.16533 * 359.97438 * 26 25 24 28 28 C 1.38082 * 120.07822 * 0.04744 * 27 26 25 29 29 C 1.53781 * 87.17609 * 25.39127 * 20 19 17 30 30 H 1.08991 * 109.47227 * 263.99007 * 1 2 3 31 31 H 1.09004 * 109.46897 * 23.98533 * 1 2 3 32 32 H 1.08992 * 109.46965 * 143.98802 * 1 2 3 33 33 H 1.09005 * 109.47109 * 314.99793 * 5 4 3 34 34 H 0.96708 * 113.99430 * 59.99713 * 6 5 4 35 35 H 1.48495 * 110.00236 * 179.97438 * 7 5 4 36 36 H 1.48504 * 109.99680 * 301.31833 * 7 5 4 37 37 H 1.07998 * 125.02322 * 180.02562 * 8 4 3 38 38 H 0.96992 * 124.94480 * 180.02562 * 9 8 4 39 39 H 1.07998 * 119.31417 * 179.97438 * 12 11 10 40 40 H 0.96995 * 120.00069 * 0.02562 * 16 14 13 41 41 H 1.08996 * 113.61215 * 334.57158 * 19 17 16 42 42 H 1.08998 * 113.61293 * 203.66976 * 19 17 16 43 43 H 1.07997 * 120.04010 * 0.02883 * 24 23 22 44 44 H 1.08000 * 119.95845 * 180.25237 * 25 24 23 45 45 H 1.08005 * 119.91897 * 180.02562 * 26 25 24 46 46 H 1.07997 * 119.96252 * 180.02562 * 27 26 25 47 47 H 1.08003 * 120.04395 * 179.97438 * 28 27 26 48 48 H 1.09008 * 113.61500 * 89.15266 * 29 20 19 49 49 H 1.08996 * 113.61911 * 220.05819 * 29 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1936 0.0000 4 6 1.8516 2.6101 -0.0028 5 6 0.4527 3.1705 0.0014 6 8 -0.1137 3.0279 1.3055 7 14 0.5052 4.9750 -0.4590 8 6 2.9948 3.3126 -0.0102 9 7 4.0669 2.4605 -0.0119 10 6 3.6347 1.1588 -0.0060 11 7 4.2721 -0.0065 -0.0053 12 6 3.6267 -1.1500 0.0006 13 6 2.2275 -1.1974 0.0057 14 6 1.5225 -2.4949 0.0113 15 8 0.3126 -2.5289 0.1253 16 7 2.2204 -3.6416 -0.1101 17 6 1.5211 -4.9289 -0.1040 18 1 0.4772 -4.8461 -0.4066 19 6 2.2858 -6.0487 -0.8294 20 6 2.9640 -6.3504 0.5174 21 1 3.8794 -5.7824 0.6822 22 16 3.1652 -8.1225 0.8487 23 6 4.0439 -8.1429 2.3759 24 6 4.3902 -9.3534 2.9641 25 6 5.0834 -9.3655 4.1583 26 6 5.4288 -8.1749 4.7713 27 6 5.0820 -6.9683 4.1911 28 6 4.3884 -6.9485 2.9973 29 6 1.7269 -5.7342 1.1918 30 1 -0.3633 -0.1076 1.0219 31 1 -0.3633 0.9390 -0.4178 32 1 -0.3633 -0.8312 -0.6042 33 1 -0.1579 2.6288 -0.7211 34 1 0.3791 3.4855 2.0005 35 1 -0.8684 5.5393 -0.4591 36 1 1.3605 5.7191 0.5002 37 1 3.0598 4.3907 -0.0135 38 1 4.9965 2.7373 -0.0166 39 1 4.1869 -2.0734 0.0005 40 1 3.1858 -3.6145 -0.2008 41 1 2.9734 -5.6844 -1.5926 42 1 1.6448 -6.8551 -1.1859 43 1 4.1214 -10.2835 2.4856 44 1 5.3564 -10.3058 4.6139 45 1 5.9713 -8.1873 5.7051 46 1 5.3537 -6.0405 4.6725 47 1 4.1175 -6.0059 2.5449 48 1 0.9328 -6.4545 1.3890 49 1 1.9639 -5.1164 2.0579 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12525224_12890568.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:46:09 Heat of formation + Delta-G solvation = 71.669907 kcal Electronic energy + Delta-G solvation = -33368.019126 eV Core-core repulsion = 28968.576739 eV Total energy + Delta-G solvation = -4399.442387 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.129 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.89045 -41.34775 -39.86767 -39.63466 -38.56270 -37.84194 -35.14113 -34.41132 -32.06709 -31.96185 -31.88378 -30.98669 -28.87225 -27.02665 -26.87835 -26.28480 -24.69825 -23.98575 -23.66271 -23.36508 -22.06314 -20.77034 -20.71706 -19.41346 -18.84614 -18.69723 -17.90467 -17.62961 -17.54803 -17.00482 -16.68043 -16.60324 -16.40699 -16.04983 -15.82136 -15.76871 -15.58079 -15.44836 -15.06913 -14.91356 -14.69945 -14.43460 -14.24081 -14.11462 -13.95657 -13.75425 -13.70622 -13.61264 -13.56555 -13.28788 -13.18501 -12.97541 -12.47418 -12.25154 -12.11537 -11.95553 -11.84752 -11.68827 -11.24054 -11.08243 -11.06967 -10.71995 -10.52898 -10.26646 -10.14959 -9.94481 -9.63582 -9.17973 -8.34762 -5.03059 -0.27074 -0.09646 0.25867 0.40968 0.54001 1.20524 1.33491 1.37857 1.47904 1.56946 1.85503 1.91104 1.96379 2.76362 2.79829 3.17671 3.18568 3.25147 3.35629 3.47375 3.55574 3.58841 3.66697 3.71199 3.73854 3.89730 3.98093 4.04686 4.16863 4.18017 4.24357 4.35847 4.39570 4.44569 4.53568 4.54164 4.59759 4.61475 4.66674 4.76981 4.77437 4.80564 4.88874 4.98098 5.02163 5.03185 5.17230 5.29599 5.34848 5.41761 5.43051 5.54177 5.56247 5.74058 5.94064 6.05660 6.37834 6.41891 6.81279 7.17359 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C 0.087 3.913 3 C -0.148 4.148 4 C -0.176 4.176 5 C -0.044 4.044 6 O -0.526 6.526 7 Si 0.685 3.315 8 C 0.067 3.933 9 N -0.569 5.569 10 C 0.308 3.692 11 N -0.503 5.503 12 C 0.181 3.819 13 C -0.235 4.235 14 C 0.576 3.424 15 O -0.524 6.524 16 N -0.714 5.714 17 C 0.128 3.872 18 H 0.116 0.884 19 C -0.115 4.115 20 C -0.108 4.108 21 H 0.110 0.890 22 S -0.104 6.104 23 C -0.083 4.083 24 C -0.102 4.102 25 C -0.101 4.101 26 C -0.125 4.125 27 C -0.101 4.101 28 C -0.132 4.132 29 C -0.138 4.138 30 H 0.087 0.913 31 H 0.070 0.930 32 H 0.097 0.903 33 H 0.120 0.880 34 H 0.374 0.626 35 H -0.254 1.254 36 H -0.258 1.258 37 H 0.184 0.816 38 H 0.426 0.574 39 H 0.161 0.839 40 H 0.399 0.601 41 H 0.088 0.912 42 H 0.108 0.892 43 H 0.127 0.873 44 H 0.128 0.872 45 H 0.125 0.875 46 H 0.125 0.875 47 H 0.122 0.878 48 H 0.106 0.894 49 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.802 3.015 -1.864 5.198 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.079 3.921 3 C -0.155 4.155 4 C -0.184 4.184 5 C -0.154 4.154 6 O -0.331 6.331 7 Si 0.585 3.415 8 C -0.060 4.060 9 N -0.175 5.175 10 C 0.075 3.925 11 N -0.216 5.216 12 C 0.012 3.988 13 C -0.242 4.242 14 C 0.364 3.636 15 O -0.401 6.401 16 N -0.366 5.366 17 C 0.021 3.979 18 H 0.134 0.866 19 C -0.155 4.155 20 C -0.237 4.237 21 H 0.128 0.872 22 S 0.142 5.858 23 C -0.195 4.195 24 C -0.126 4.126 25 C -0.121 4.121 26 C -0.146 4.146 27 C -0.121 4.121 28 C -0.156 4.156 29 C -0.178 4.178 30 H 0.105 0.895 31 H 0.089 0.911 32 H 0.115 0.885 33 H 0.137 0.863 34 H 0.222 0.778 35 H -0.178 1.178 36 H -0.183 1.183 37 H 0.201 0.799 38 H 0.264 0.736 39 H 0.178 0.822 40 H 0.234 0.766 41 H 0.106 0.894 42 H 0.126 0.874 43 H 0.145 0.855 44 H 0.146 0.854 45 H 0.143 0.857 46 H 0.143 0.857 47 H 0.140 0.860 48 H 0.125 0.875 49 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 2.905 2.733 -2.659 4.793 hybrid contribution 1.086 0.839 2.098 2.507 sum 3.991 3.572 -0.560 5.385 Atomic orbital electron populations 1.21185 0.88646 1.03800 1.04344 1.19932 0.97189 0.89134 0.85884 1.19455 0.92748 0.93530 1.09777 1.20625 0.95248 0.91019 1.11461 1.24469 0.90975 1.11715 0.88285 1.86641 1.54281 1.75865 1.16349 0.95174 0.82689 0.73594 0.90041 1.21804 0.85101 0.95979 1.03068 1.41520 1.09616 1.02710 1.63626 1.18498 0.89353 0.85878 0.98759 1.66435 1.40549 0.96007 1.18656 1.22475 0.90056 0.94426 0.91855 1.20383 0.94717 0.93629 1.15499 1.17862 0.86811 0.83116 0.75778 1.90773 1.13511 1.86937 1.48849 1.45574 1.10505 1.05030 1.75457 1.21806 0.98246 0.81620 0.96227 0.86617 1.23176 0.99375 0.98299 0.94632 1.25096 1.01679 0.95207 1.01721 0.87153 1.85545 1.68932 1.08928 1.22349 1.21750 1.02427 0.96495 0.98853 1.20807 0.99387 0.96340 0.96061 1.21143 0.97470 0.98556 0.94881 1.21237 1.00536 0.92463 1.00326 1.21099 0.97519 0.98359 0.95106 1.21171 1.00987 0.96529 0.96866 1.23819 0.96674 0.99301 0.98038 0.89505 0.91129 0.88461 0.86253 0.77829 1.17784 1.18266 0.79949 0.73574 0.82250 0.76563 0.89353 0.87394 0.85482 0.85387 0.85693 0.85715 0.85980 0.87524 0.90247 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.31 8.68 36.01 0.31 0.01 16 2 C 0.09 0.22 5.98 -103.67 -0.62 -0.40 16 3 C -0.15 -0.30 6.16 -105.13 -0.65 -0.94 16 4 C -0.18 0.04 5.57 -102.73 -0.57 -0.53 16 5 C -0.04 0.04 2.08 36.01 0.07 0.11 16 6 O -0.53 -0.35 12.88 -35.23 -0.45 -0.81 16 7 Si 0.68 -1.62 30.83 -169.99 -5.24 -6.86 16 8 C 0.07 -0.15 10.44 -16.70 -0.17 -0.32 16 9 N -0.57 0.72 6.04 -12.12 -0.07 0.65 16 10 C 0.31 0.54 8.42 -155.71 -1.31 -0.77 16 11 N -0.50 -1.04 10.37 -11.96 -0.12 -1.16 16 12 C 0.18 0.07 10.67 -17.11 -0.18 -0.11 16 13 C -0.23 -0.38 5.89 -104.82 -0.62 -0.99 16 14 C 0.58 0.97 7.72 -12.41 -0.10 0.87 16 15 O -0.52 -2.45 13.10 5.30 0.07 -2.38 16 16 N -0.71 0.99 5.21 -53.92 -0.28 0.71 16 17 C 0.13 -0.18 4.33 -67.02 -0.29 -0.47 16 18 H 0.12 0.00 7.47 -51.93 -0.39 -0.39 16 19 C -0.12 0.29 7.42 -25.92 -0.19 0.10 16 20 C -0.11 0.18 2.85 -25.92 -0.07 0.10 16 21 H 0.11 -0.27 6.97 -51.94 -0.36 -0.63 16 22 S -0.10 -0.08 21.72 -107.50 -2.33 -2.42 16 23 C -0.08 -0.15 6.11 -39.04 -0.24 -0.39 16 24 C -0.10 -0.17 9.79 -39.37 -0.39 -0.55 16 25 C -0.10 -0.08 10.04 -39.62 -0.40 -0.48 16 26 C -0.13 -0.08 10.04 -39.54 -0.40 -0.48 16 27 C -0.10 -0.07 10.04 -39.62 -0.40 -0.47 16 28 C -0.13 -0.14 9.32 -39.36 -0.37 -0.51 16 29 C -0.14 0.17 7.29 -25.83 -0.19 -0.02 16 30 H 0.09 0.30 8.14 -51.93 -0.42 -0.13 16 31 H 0.07 0.11 5.06 -51.93 -0.26 -0.16 16 32 H 0.10 0.33 5.96 -51.93 -0.31 0.02 16 33 H 0.12 -0.11 6.03 -51.93 -0.31 -0.42 16 34 H 0.37 -0.81 8.70 45.56 0.40 -0.42 16 35 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 36 H -0.26 0.33 7.00 56.52 0.40 0.72 16 37 H 0.18 -0.96 6.28 -52.49 -0.33 -1.29 16 38 H 0.43 -1.59 8.96 -40.82 -0.37 -1.96 16 39 H 0.16 -0.50 6.43 -52.49 -0.34 -0.84 16 40 H 0.40 -1.50 6.78 -40.82 -0.28 -1.78 16 41 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 42 H 0.11 -0.27 8.10 -51.93 -0.42 -0.69 16 43 H 0.13 0.08 8.06 -52.49 -0.42 -0.34 16 44 H 0.13 -0.15 8.06 -52.49 -0.42 -0.57 16 45 H 0.13 -0.15 8.06 -52.48 -0.42 -0.57 16 46 H 0.12 -0.13 8.06 -52.49 -0.42 -0.56 16 47 H 0.12 -0.05 5.56 -52.48 -0.29 -0.34 16 48 H 0.11 -0.09 8.10 -51.92 -0.42 -0.51 16 49 H 0.08 -0.04 8.09 -51.93 -0.42 -0.46 16 LS Contribution 410.09 15.07 6.18 6.18 Total: 0.00 -9.43 410.09 -14.86 -24.29 By element: Atomic # 1 Polarization: -6.12 SS G_CDS: -5.84 Total: -11.96 kcal Atomic # 6 Polarization: 0.53 SS G_CDS: -6.76 Total: -6.24 kcal Atomic # 7 Polarization: 0.67 SS G_CDS: -0.48 Total: 0.19 kcal Atomic # 8 Polarization: -2.80 SS G_CDS: -0.38 Total: -3.18 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: -5.24 Total: -6.86 kcal Atomic # 16 Polarization: -0.08 SS G_CDS: -2.33 Total: -2.42 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -9.43 -14.86 -24.29 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525224_12890568.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.962 kcal (2) G-P(sol) polarization free energy of solvation -9.431 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 86.531 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.861 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.292 kcal (6) G-S(sol) free energy of system = (1) + (5) 71.670 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds