Wall clock time and date at job start Sat Mar 6 2021 19:46:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.38975 * 119.95431 * 2 1 4 4 O 1.35705 * 119.91445 * 0.02562 * 3 2 1 5 5 C 1.39021 * 120.17563 * 180.02562 * 3 2 1 6 6 C 1.50697 * 119.95837 * 180.02562 * 5 3 2 7 7 O 1.42893 * 109.46933 * 75.02057 * 6 5 3 8 8 Si 1.86294 * 109.47078 * 195.02258 * 6 5 3 9 9 C 1.37690 * 120.08542 * 0.04293 * 5 3 2 10 10 C 1.39757 * 119.91159 * 359.97438 * 9 5 3 11 11 C 1.47603 * 120.08308 * 180.02562 * 10 9 5 12 12 O 1.21573 * 120.00415 * 359.97438 * 11 10 9 13 13 N 1.34783 * 119.99422 * 179.97438 * 11 10 9 14 14 C 1.46502 * 119.99683 * 179.97438 * 13 11 10 15 15 H 1.08999 * 112.85025 * 23.80911 * 14 13 11 16 16 C 1.53779 * 113.61301 * 154.99921 * 14 13 11 17 17 C 1.53787 * 87.07963 * 89.11687 * 16 14 13 18 18 H 1.08994 * 113.61447 * 270.88515 * 17 16 14 19 19 S 1.81404 * 113.61330 * 139.97814 * 17 16 14 20 20 C 1.76196 * 102.99963 * 175.00166 * 19 17 16 21 21 C 1.38977 * 120.07839 * 359.73022 * 20 19 17 22 22 C 1.38083 * 119.91827 * 179.76604 * 21 20 19 23 23 C 1.38308 * 120.07919 * 0.48050 * 22 21 20 24 24 C 1.38302 * 120.15857 * 359.77356 * 23 22 21 25 25 C 1.38080 * 120.08259 * 359.97438 * 24 23 22 26 26 C 1.53779 * 113.61564 * 252.49989 * 14 13 11 27 27 C 1.37723 * 119.95357 * 180.32393 * 2 1 3 28 28 H 1.08993 * 109.47505 * 89.99887 * 1 2 3 29 29 H 1.09000 * 109.47413 * 210.00309 * 1 2 3 30 30 H 1.09008 * 109.47102 * 329.99900 * 1 2 3 31 31 H 0.96694 * 114.00575 * 269.97656 * 4 3 2 32 32 H 1.09002 * 109.47205 * 315.02199 * 6 5 3 33 33 H 0.96700 * 114.00778 * 60.00153 * 7 6 5 34 34 H 1.48494 * 110.00554 * 58.68085 * 8 6 5 35 35 H 1.48504 * 110.00169 * 180.02562 * 8 6 5 36 36 H 1.08004 * 120.04104 * 180.02562 * 9 5 3 37 37 H 0.96996 * 119.99920 * 0.02562 * 13 11 10 38 38 H 1.08997 * 113.61646 * 334.57319 * 16 14 13 39 39 H 1.09000 * 113.61527 * 203.66590 * 16 14 13 40 40 H 1.07994 * 120.04195 * 359.97438 * 21 20 19 41 41 H 1.07997 * 119.96231 * 180.23037 * 22 21 20 42 42 H 1.07999 * 119.91713 * 179.74520 * 23 22 21 43 43 H 1.08001 * 119.95483 * 179.97438 * 24 23 22 44 44 H 1.07997 * 120.03991 * 179.97438 * 25 24 23 45 45 H 1.09002 * 113.61557 * 156.33711 * 26 14 13 46 46 H 1.09004 * 113.61501 * 25.43131 * 26 14 13 47 47 H 1.07997 * 120.04723 * 359.97438 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5197 2.3778 0.0005 5 6 3.5911 1.2095 -0.0005 6 6 4.3386 2.5180 0.0000 7 8 4.2730 3.1034 1.3019 8 14 6.1194 2.2161 -0.4561 9 6 4.2859 0.0208 -0.0020 10 6 3.5918 -1.1922 -0.0023 11 6 4.3328 -2.4688 -0.0033 12 8 5.5485 -2.4660 -0.0042 13 7 3.6615 -3.6375 -0.0031 14 6 4.3969 -4.9046 -0.0046 15 1 5.4047 -4.8095 0.3997 16 6 3.6024 -6.0787 0.5912 17 6 3.0616 -6.3295 -0.8265 18 1 2.1495 -5.7764 -1.0500 19 16 2.9457 -8.0873 -1.2595 20 6 2.1723 -8.0554 -2.8423 21 6 1.8186 -6.8420 -3.4204 22 6 1.2170 -6.8206 -4.6631 23 6 0.9575 -8.0052 -5.3281 24 6 1.3034 -9.2148 -4.7536 25 6 1.9099 -9.2436 -3.5135 26 6 4.3382 -5.6494 -1.3487 27 6 2.1946 -1.1933 -0.0067 28 1 -0.3634 0.0000 -1.0276 29 1 -0.3634 -0.8899 0.5139 30 1 -0.3634 0.8900 0.5139 31 1 1.3222 2.7184 -0.8826 32 1 3.8873 3.1946 -0.7257 33 1 4.6571 2.5551 1.9997 34 1 6.1998 1.5782 -1.7947 35 1 6.8677 3.4988 -0.4585 36 1 5.3659 0.0258 -0.0020 37 1 2.6915 -3.6397 -0.0027 38 1 2.8361 -5.7710 1.3026 39 1 4.2315 -6.8853 0.9676 40 1 2.0169 -5.9169 -2.8997 41 1 0.9452 -5.8779 -5.1146 42 1 0.4832 -7.9856 -6.2982 43 1 1.0989 -10.1378 -5.2756 44 1 2.1794 -10.1886 -3.0653 45 1 5.1685 -6.3386 -1.5027 46 1 4.1659 -4.9950 -2.2034 47 1 1.6547 -2.1285 -0.0116 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12525224_13287732.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:46:38 Heat of formation + Delta-G solvation = -23.828420 kcal Electronic energy + Delta-G solvation = -30338.991797 eV Core-core repulsion = 26159.567822 eV Total energy + Delta-G solvation = -4179.423975 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.123 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.89525 -40.97140 -39.89076 -39.32433 -37.86178 -37.52300 -34.64349 -34.04303 -32.13178 -31.94083 -31.72112 -28.17315 -27.21708 -27.04175 -26.64185 -24.76156 -23.72423 -23.44169 -22.20381 -21.73351 -20.80283 -19.64804 -18.98036 -18.74943 -18.16559 -17.74022 -17.30504 -16.92544 -16.67483 -16.51894 -16.10815 -16.00937 -15.88736 -15.74544 -15.53156 -15.08673 -14.93615 -14.77154 -14.56656 -14.45706 -14.21905 -14.14513 -13.99876 -13.84780 -13.76416 -13.41247 -13.27171 -13.10585 -12.88602 -12.34882 -12.32236 -12.17686 -12.03925 -12.02024 -11.76683 -11.68658 -11.15589 -11.06914 -10.77233 -10.44332 -10.29346 -10.08198 -9.99685 -9.75545 -8.40024 -5.01499 -0.48000 -0.02563 0.20717 0.35832 0.48250 1.23419 1.32122 1.55285 1.64485 1.85203 1.94843 2.48149 2.71273 2.96355 3.11221 3.12930 3.29295 3.41234 3.47181 3.54740 3.62294 3.64338 3.83969 3.85549 3.92839 4.07864 4.12024 4.18773 4.29223 4.35410 4.39535 4.44678 4.47416 4.48360 4.51125 4.52589 4.58420 4.60245 4.72038 4.72915 4.81700 4.90260 4.96963 4.98002 5.00814 5.18476 5.24303 5.32522 5.38005 5.44025 5.51304 5.88994 6.26093 6.47457 6.55905 7.02814 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.117 4.117 3 C 0.161 3.839 4 O -0.483 6.483 5 C -0.151 4.151 6 C -0.055 4.055 7 O -0.531 6.531 8 Si 0.677 3.323 9 C -0.044 4.044 10 C -0.139 4.139 11 C 0.566 3.434 12 O -0.526 6.526 13 N -0.711 5.711 14 C 0.126 3.874 15 H 0.117 0.883 16 C -0.115 4.115 17 C -0.109 4.109 18 H 0.110 0.890 19 S -0.103 6.103 20 C -0.083 4.083 21 C -0.133 4.133 22 C -0.101 4.101 23 C -0.125 4.125 24 C -0.100 4.100 25 C -0.102 4.102 26 C -0.137 4.137 27 C -0.066 4.066 28 H 0.073 0.927 29 H 0.071 0.929 30 H 0.078 0.922 31 H 0.394 0.606 32 H 0.112 0.888 33 H 0.378 0.622 34 H -0.254 1.254 35 H -0.249 1.249 36 H 0.146 0.854 37 H 0.400 0.600 38 H 0.088 0.912 39 H 0.109 0.891 40 H 0.122 0.878 41 H 0.125 0.875 42 H 0.125 0.875 43 H 0.129 0.871 44 H 0.128 0.872 45 H 0.108 0.892 46 H 0.079 0.921 47 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.458 -1.806 -0.656 3.956 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.117 4.117 3 C 0.116 3.884 4 O -0.294 6.294 5 C -0.152 4.152 6 C -0.166 4.166 7 O -0.336 6.336 8 Si 0.578 3.422 9 C -0.062 4.062 10 C -0.142 4.142 11 C 0.353 3.647 12 O -0.402 6.402 13 N -0.363 5.363 14 C 0.019 3.981 15 H 0.135 0.865 16 C -0.155 4.155 17 C -0.238 4.238 18 H 0.128 0.872 19 S 0.145 5.855 20 C -0.196 4.196 21 C -0.156 4.156 22 C -0.121 4.121 23 C -0.145 4.145 24 C -0.120 4.120 25 C -0.126 4.126 26 C -0.178 4.178 27 C -0.085 4.085 28 H 0.091 0.909 29 H 0.090 0.910 30 H 0.097 0.903 31 H 0.251 0.749 32 H 0.129 0.871 33 H 0.225 0.775 34 H -0.179 1.179 35 H -0.174 1.174 36 H 0.163 0.837 37 H 0.236 0.764 38 H 0.106 0.894 39 H 0.127 0.873 40 H 0.139 0.861 41 H 0.143 0.857 42 H 0.143 0.857 43 H 0.147 0.853 44 H 0.146 0.854 45 H 0.126 0.874 46 H 0.097 0.903 47 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -1.781 -2.136 -0.188 2.787 hybrid contribution -1.796 1.110 -1.603 2.651 sum -3.577 -1.026 -1.791 4.130 Atomic orbital electron populations 1.20744 0.89685 1.03945 1.02810 1.20217 0.97343 0.92084 1.02105 1.18322 0.88816 0.85295 0.95989 1.84784 1.75612 1.35654 1.33318 1.20702 0.93932 0.96088 1.04519 1.24864 1.09356 0.92805 0.89577 1.86555 1.84528 1.46654 1.15869 0.94644 0.77281 0.83919 0.86365 1.20951 1.00029 0.90110 0.95112 1.19772 0.93426 0.93306 1.07742 1.18117 0.87247 0.83416 0.75872 1.90820 1.13175 1.87377 1.48829 1.45577 1.10065 1.04943 1.75742 1.21809 0.97578 0.81997 0.96749 0.86522 1.23183 1.00241 0.98053 0.93979 1.25099 1.01892 0.95403 1.01374 0.87196 1.85563 1.74203 1.09415 1.16369 1.21752 1.02811 0.96506 0.98503 1.21153 1.01426 0.96272 0.96767 1.21096 0.98001 0.98543 0.94457 1.21245 1.00501 0.92477 1.00318 1.21151 0.97615 0.98388 0.94847 1.20812 0.99886 0.96635 0.95233 1.23787 0.96677 0.99156 0.98148 1.21082 0.92561 0.97787 0.97073 0.90872 0.91010 0.90294 0.74888 0.87070 0.77475 1.17881 1.17381 0.83698 0.76417 0.89374 0.87301 0.86054 0.85726 0.85659 0.85345 0.85447 0.87413 0.90273 0.85122 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.30 9.78 36.00 0.35 0.65 16 2 C -0.12 0.13 5.89 -104.54 -0.62 -0.49 16 3 C 0.16 0.01 6.66 -39.02 -0.26 -0.25 16 4 O -0.48 0.10 11.84 -18.82 -0.22 -0.12 16 5 C -0.15 -0.02 5.27 -104.53 -0.55 -0.57 16 6 C -0.05 -0.01 2.37 36.00 0.09 0.08 16 7 O -0.53 -0.58 12.88 -35.23 -0.45 -1.03 16 8 Si 0.68 -0.07 29.91 -169.99 -5.08 -5.16 16 9 C -0.04 -0.01 8.20 -39.21 -0.32 -0.33 16 10 C -0.14 0.01 5.88 -104.96 -0.62 -0.60 16 11 C 0.57 0.46 7.76 -12.44 -0.10 0.37 16 12 O -0.53 -2.23 15.94 5.30 0.08 -2.15 16 13 N -0.71 1.45 5.21 -54.04 -0.28 1.17 16 14 C 0.13 -0.24 4.32 -67.12 -0.29 -0.53 16 15 H 0.12 -0.06 7.46 -51.93 -0.39 -0.45 16 16 C -0.11 0.35 7.42 -25.92 -0.19 0.16 16 17 C -0.11 0.24 2.89 -25.91 -0.07 0.16 16 18 H 0.11 -0.33 6.85 -51.93 -0.36 -0.69 16 19 S -0.10 -0.03 21.72 -107.50 -2.33 -2.37 16 20 C -0.08 -0.11 6.11 -39.04 -0.24 -0.35 16 21 C -0.13 -0.06 9.32 -39.36 -0.37 -0.43 16 22 C -0.10 -0.01 10.04 -39.61 -0.40 -0.41 16 23 C -0.12 -0.02 10.04 -39.53 -0.40 -0.41 16 24 C -0.10 -0.04 10.04 -39.62 -0.40 -0.43 16 25 C -0.10 -0.12 9.79 -39.37 -0.39 -0.51 16 26 C -0.14 0.24 7.38 -25.92 -0.19 0.05 16 27 C -0.07 0.12 9.18 -39.22 -0.36 -0.24 16 28 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 29 H 0.07 -0.25 8.09 -51.93 -0.42 -0.67 16 30 H 0.08 -0.13 7.52 -51.92 -0.39 -0.52 16 31 H 0.39 -1.74 9.06 45.56 0.41 -1.33 16 32 H 0.11 -0.01 7.82 -51.93 -0.41 -0.42 16 33 H 0.38 -0.97 8.70 45.56 0.40 -0.57 16 34 H -0.25 -0.61 7.11 56.52 0.40 -0.21 16 35 H -0.25 -0.69 7.11 56.52 0.40 -0.29 16 36 H 0.15 -0.02 4.70 -52.48 -0.25 -0.27 16 37 H 0.40 -1.78 6.72 -40.82 -0.27 -2.05 16 38 H 0.09 -0.34 8.14 -51.93 -0.42 -0.77 16 39 H 0.11 -0.33 8.10 -51.93 -0.42 -0.75 16 40 H 0.12 -0.13 5.64 -52.49 -0.30 -0.43 16 41 H 0.12 -0.22 8.06 -52.49 -0.42 -0.64 16 42 H 0.13 -0.21 8.06 -52.49 -0.42 -0.64 16 43 H 0.13 -0.20 8.06 -52.49 -0.42 -0.62 16 44 H 0.13 0.03 8.06 -52.49 -0.42 -0.39 16 45 H 0.11 -0.15 8.10 -51.93 -0.42 -0.57 16 46 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 47 H 0.13 -0.61 6.39 -52.49 -0.34 -0.94 16 LS Contribution 401.87 15.07 6.06 6.06 Total: 0.00 -9.24 401.87 -12.85 -22.09 By element: Atomic # 1 Polarization: -9.10 SS G_CDS: -5.30 Total: -14.40 kcal Atomic # 6 Polarization: 1.22 SS G_CDS: -5.31 Total: -4.09 kcal Atomic # 7 Polarization: 1.45 SS G_CDS: -0.28 Total: 1.17 kcal Atomic # 8 Polarization: -2.71 SS G_CDS: -0.59 Total: -3.30 kcal Atomic # 14 Polarization: -0.07 SS G_CDS: -5.08 Total: -5.16 kcal Atomic # 16 Polarization: -0.03 SS G_CDS: -2.33 Total: -2.37 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -9.24 -12.85 -22.09 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525224_13287732.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.736 kcal (2) G-P(sol) polarization free energy of solvation -9.238 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.975 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.854 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.092 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.828 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds