Wall clock time and date at job start Sat Mar 6 2021 19:47:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39043 * 110.99815 * 236.04799 * 2 1 3 5 5 C 1.39203 * 119.93121 * 240.00456 * 4 2 1 6 6 C 1.50697 * 119.96538 * 359.97438 * 5 4 2 7 7 O 1.42902 * 109.47290 * 285.00642 * 6 5 4 8 8 Si 1.86295 * 109.47105 * 165.00163 * 6 5 4 9 9 C 1.37633 * 120.06886 * 179.97438 * 5 4 2 10 10 C 1.39773 * 119.93025 * 0.02562 * 9 5 4 11 11 C 1.47524 * 120.06743 * 180.02562 * 10 9 5 12 12 O 1.21599 * 120.00073 * 359.97438 * 11 10 9 13 13 N 1.34772 * 119.99834 * 180.02562 * 11 10 9 14 14 C 1.46501 * 119.99738 * 179.97438 * 13 11 10 15 15 H 1.08999 * 112.85071 * 25.33263 * 14 13 11 16 16 C 1.53784 * 113.61161 * 156.52863 * 14 13 11 17 17 C 1.53773 * 87.08324 * 89.11550 * 16 14 13 18 18 H 1.08994 * 113.61674 * 270.88214 * 17 16 14 19 19 S 1.81402 * 113.61743 * 140.06178 * 17 16 14 20 20 C 1.76195 * 103.00342 * 174.99911 * 19 17 16 21 21 C 1.38974 * 120.07826 * 359.73060 * 20 19 17 22 22 C 1.38084 * 119.91970 * 179.67889 * 21 20 19 23 23 C 1.38311 * 120.07885 * 0.61575 * 22 21 20 24 24 C 1.38295 * 120.15794 * 359.67908 * 23 22 21 25 25 C 1.38089 * 120.08267 * 0.02562 * 24 23 22 26 26 C 1.53782 * 113.61505 * 254.13209 * 14 13 11 27 27 C 1.39820 * 119.86172 * 0.02562 * 10 9 5 28 28 C 1.37582 * 119.93048 * 359.69969 * 27 10 9 29 29 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 30 30 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 31 31 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 32 32 H 1.09006 * 109.46770 * 56.04400 * 3 2 1 33 33 H 1.09001 * 109.47456 * 176.04615 * 3 2 1 34 34 H 1.09000 * 109.46814 * 296.04921 * 3 2 1 35 35 H 1.08998 * 109.47004 * 45.00152 * 6 5 4 36 36 H 0.96699 * 114.00359 * 59.99790 * 7 6 5 37 37 H 1.48498 * 110.00400 * 300.00155 * 8 6 5 38 38 H 1.48507 * 109.99907 * 61.32224 * 8 6 5 39 39 H 1.08000 * 120.03467 * 179.97438 * 9 5 4 40 40 H 0.97000 * 120.00618 * 359.97438 * 13 11 10 41 41 H 1.09005 * 113.61058 * 203.66157 * 16 14 13 42 42 H 1.08994 * 113.61606 * 334.56162 * 16 14 13 43 43 H 1.07998 * 120.04120 * 359.97438 * 21 20 19 44 44 H 1.07998 * 119.96254 * 180.31877 * 22 21 20 45 45 H 1.07995 * 119.92054 * 179.70353 * 23 22 21 46 46 H 1.08003 * 119.96125 * 180.02562 * 24 23 22 47 47 H 1.07999 * 120.03928 * 179.97438 * 25 24 23 48 48 H 1.09002 * 113.61092 * 25.43345 * 26 14 13 49 49 H 1.08998 * 113.61541 * 156.33561 * 26 14 13 50 50 H 1.08002 * 120.02916 * 180.02562 * 27 10 9 51 51 H 1.08002 * 119.96336 * 180.29518 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9673 -0.7250 -1.0768 5 6 2.7792 -1.8331 -0.8519 6 6 3.1173 -2.2448 0.5578 7 8 4.0867 -1.3442 1.0976 8 14 3.8119 -3.9734 0.5502 9 6 3.2735 -2.5531 -1.9156 10 6 2.9599 -2.1702 -3.2228 11 6 3.4876 -2.9401 -4.3652 12 8 4.1966 -3.9086 -4.1702 13 7 3.1847 -2.5694 -5.6251 14 6 3.7092 -3.3337 -6.7596 15 1 3.9363 -4.3686 -6.5040 16 6 2.8732 -3.1849 -8.0417 17 6 3.7552 -1.9722 -8.3823 18 1 3.3776 -1.0315 -7.9819 19 16 4.1952 -1.8640 -10.1388 20 6 5.0580 -0.3310 -10.2377 21 6 5.2309 0.4457 -9.0983 22 6 5.9134 1.6434 -9.1782 23 6 6.4136 2.0765 -10.3928 24 6 6.2382 1.3091 -11.5299 25 6 5.5620 0.1074 -11.4564 26 6 4.8467 -2.6205 -7.5096 27 6 2.1449 -1.0561 -3.4454 28 6 1.6493 -0.3439 -2.3777 29 1 -0.3634 -1.0252 0.0708 30 1 -0.3633 0.4513 -0.9233 31 1 -0.3633 0.5740 0.8525 32 1 1.5899 1.9163 0.8525 33 1 3.0829 1.3431 0.0709 34 1 1.7045 1.8723 -0.9233 35 1 2.2160 -2.2181 1.1701 36 1 3.7923 -0.4238 1.1320 37 1 2.8133 -4.9197 -0.0089 38 1 5.0588 -4.0162 -0.2554 39 1 3.9037 -3.4125 -1.7405 40 1 2.6195 -1.7967 -5.7807 41 1 2.9877 -4.0170 -8.7365 42 1 1.8304 -2.9280 -7.8557 43 1 4.8361 0.1107 -8.1506 44 1 6.0526 2.2451 -8.2923 45 1 6.9429 3.0159 -10.4533 46 1 6.6305 1.6501 -12.4766 47 1 5.4250 -0.4911 -12.3448 48 1 5.3960 -1.9080 -6.8942 49 1 5.4997 -3.2984 -8.0592 50 1 1.9005 -0.7581 -4.4543 51 1 1.0159 0.5140 -2.5489 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12525224_13422196.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:47:02 Heat of formation + Delta-G solvation = 35.842865 kcal Electronic energy + Delta-G solvation = -32446.426858 eV Core-core repulsion = 28211.771466 eV Total energy + Delta-G solvation = -4234.655391 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.150 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -41.93022 -41.03803 -39.89320 -39.35581 -37.71484 -37.30849 -34.64594 -32.78762 -32.09864 -31.93615 -31.40575 -28.83237 -27.25738 -27.04219 -26.95051 -25.75388 -23.79049 -23.64445 -23.33408 -23.04958 -21.42205 -20.84088 -19.24779 -18.77126 -18.15511 -18.02931 -17.67926 -17.38190 -16.78759 -16.55021 -16.47576 -16.07016 -16.00708 -15.96669 -15.82335 -15.61529 -15.14360 -15.03662 -14.91923 -14.69136 -14.47760 -14.23981 -14.14135 -13.90573 -13.79723 -13.73489 -13.68528 -13.27751 -13.25015 -13.15370 -12.91404 -12.78569 -12.32667 -12.18859 -12.03640 -12.02828 -11.77141 -11.34094 -11.18529 -11.12078 -10.90237 -10.77574 -10.31714 -10.21767 -9.99738 -9.92441 -9.82189 -8.40548 -4.75080 -0.50919 0.02345 0.20607 0.35750 0.47562 1.31438 1.45827 1.57344 1.76425 1.83485 2.09097 2.51594 2.54533 2.71183 3.09486 3.11030 3.38060 3.43920 3.52847 3.57854 3.62028 3.79671 3.84341 3.90512 3.92725 4.00154 4.07526 4.09931 4.11982 4.25684 4.28059 4.31304 4.35255 4.39489 4.46322 4.47909 4.50677 4.51696 4.56388 4.64757 4.69314 4.71354 4.72012 4.73924 4.81526 4.89626 4.96922 4.99732 5.10263 5.24223 5.31055 5.37974 5.40203 5.51222 5.52773 5.88949 6.03046 6.24398 6.65177 7.01301 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.516 5.516 3 C 0.023 3.977 4 C 0.128 3.872 5 C -0.096 4.096 6 C -0.067 4.067 7 O -0.533 6.533 8 Si 0.735 3.265 9 C -0.054 4.054 10 C -0.134 4.134 11 C 0.564 3.436 12 O -0.526 6.526 13 N -0.711 5.711 14 C 0.125 3.875 15 H 0.115 0.885 16 C -0.114 4.114 17 C -0.108 4.108 18 H 0.110 0.890 19 S -0.102 6.102 20 C -0.083 4.083 21 C -0.133 4.133 22 C -0.101 4.101 23 C -0.125 4.125 24 C -0.100 4.100 25 C -0.102 4.102 26 C -0.136 4.136 27 C -0.072 4.072 28 C -0.152 4.152 29 H 0.073 0.927 30 H 0.035 0.965 31 H 0.080 0.920 32 H 0.081 0.919 33 H 0.074 0.926 34 H 0.035 0.965 35 H 0.082 0.918 36 H 0.364 0.636 37 H -0.248 1.248 38 H -0.249 1.249 39 H 0.141 0.859 40 H 0.400 0.600 41 H 0.109 0.891 42 H 0.087 0.913 43 H 0.121 0.879 44 H 0.125 0.875 45 H 0.126 0.874 46 H 0.129 0.871 47 H 0.128 0.872 48 H 0.079 0.921 49 H 0.108 0.892 50 H 0.128 0.872 51 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.012 4.414 1.139 6.073 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 N -0.237 5.237 3 C -0.123 4.123 4 C 0.033 3.967 5 C -0.098 4.098 6 C -0.176 4.176 7 O -0.338 6.338 8 Si 0.633 3.367 9 C -0.073 4.073 10 C -0.137 4.137 11 C 0.351 3.649 12 O -0.403 6.403 13 N -0.363 5.363 14 C 0.018 3.982 15 H 0.133 0.867 16 C -0.154 4.154 17 C -0.237 4.237 18 H 0.128 0.872 19 S 0.145 5.855 20 C -0.196 4.196 21 C -0.156 4.156 22 C -0.121 4.121 23 C -0.145 4.145 24 C -0.120 4.120 25 C -0.126 4.126 26 C -0.177 4.177 27 C -0.091 4.091 28 C -0.172 4.172 29 H 0.092 0.908 30 H 0.053 0.947 31 H 0.099 0.901 32 H 0.100 0.900 33 H 0.093 0.907 34 H 0.054 0.946 35 H 0.100 0.900 36 H 0.212 0.788 37 H -0.173 1.173 38 H -0.173 1.173 39 H 0.158 0.842 40 H 0.236 0.764 41 H 0.127 0.873 42 H 0.106 0.894 43 H 0.139 0.861 44 H 0.143 0.857 45 H 0.144 0.856 46 H 0.147 0.853 47 H 0.146 0.854 48 H 0.098 0.902 49 H 0.126 0.874 50 H 0.146 0.854 51 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -3.117 1.385 0.434 3.438 hybrid contribution -1.133 3.419 -0.864 3.704 sum -4.250 4.804 -0.430 6.428 Atomic orbital electron populations 1.22513 0.84882 1.03197 1.01525 1.59462 1.09301 1.14587 1.40319 1.22559 1.01224 0.86840 1.01724 1.18833 0.94960 0.93814 0.89044 1.20292 0.97817 0.95104 0.96542 1.25140 0.97641 1.05076 0.89715 1.86728 1.41432 1.21040 1.84624 0.93290 0.80725 0.73518 0.89137 1.21122 0.96740 0.98523 0.90886 1.19842 1.02300 0.98058 0.93487 1.18149 0.80092 0.83950 0.82670 1.90832 1.36950 1.27298 1.85187 1.45568 1.52995 1.32696 1.04997 1.21816 0.94376 0.97383 0.84638 0.86694 1.23168 0.98951 0.96914 0.96337 1.25135 1.01792 1.02111 0.94693 0.87216 1.85546 1.67152 1.21773 1.11039 1.21747 1.02665 0.98338 0.96834 1.21154 1.01559 0.95834 0.97084 1.21099 0.97150 0.95745 0.98090 1.21244 1.00347 1.00192 0.92725 1.21153 0.97885 0.94074 0.98879 1.20813 0.98745 0.96928 0.96070 1.23827 0.96299 1.00242 0.97342 1.21134 0.95223 0.93560 0.99183 1.21602 1.01763 1.01091 0.92783 0.90829 0.94681 0.90130 0.90002 0.90735 0.94621 0.89970 0.78786 1.17277 1.17349 0.84194 0.76408 0.87253 0.89408 0.86097 0.85713 0.85627 0.85318 0.85436 0.90242 0.87384 0.85378 0.85078 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.33 60.07 0.56 0.50 16 2 N -0.52 0.61 3.70 -186.86 -0.69 -0.08 16 3 C 0.02 -0.06 9.10 60.06 0.55 0.49 16 4 C 0.13 0.03 4.66 -83.86 -0.39 -0.36 16 5 C -0.10 -0.19 5.28 -104.49 -0.55 -0.74 16 6 C -0.07 -0.09 2.29 36.00 0.08 -0.01 16 7 O -0.53 -1.04 12.65 -35.23 -0.45 -1.48 16 8 Si 0.73 0.98 30.40 -169.99 -5.17 -4.19 16 9 C -0.05 -0.18 8.19 -39.23 -0.32 -0.50 16 10 C -0.13 -0.25 5.88 -104.95 -0.62 -0.87 16 11 C 0.56 1.57 7.76 -12.48 -0.10 1.48 16 12 O -0.53 -3.56 15.95 5.28 0.08 -3.47 16 13 N -0.71 0.50 5.21 -54.06 -0.28 0.22 16 14 C 0.13 -0.09 4.30 -67.12 -0.29 -0.38 16 15 H 0.12 0.09 7.50 -51.93 -0.39 -0.30 16 16 C -0.11 0.26 7.41 -25.92 -0.19 0.07 16 17 C -0.11 0.16 2.90 -25.78 -0.07 0.08 16 18 H 0.11 -0.25 6.85 -51.93 -0.36 -0.60 16 19 S -0.10 -0.09 21.73 -107.50 -2.34 -2.42 16 20 C -0.08 -0.15 6.11 -39.04 -0.24 -0.39 16 21 C -0.13 -0.14 9.32 -39.37 -0.37 -0.51 16 22 C -0.10 -0.06 10.04 -39.61 -0.40 -0.46 16 23 C -0.12 -0.06 10.04 -39.53 -0.40 -0.46 16 24 C -0.10 -0.07 10.04 -39.62 -0.40 -0.47 16 25 C -0.10 -0.16 9.79 -39.37 -0.39 -0.55 16 26 C -0.14 0.10 7.40 -25.77 -0.19 -0.09 16 27 C -0.07 0.06 9.53 -39.23 -0.37 -0.31 16 28 C -0.15 0.13 8.53 -39.45 -0.34 -0.20 16 29 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 30 H 0.03 -0.09 7.08 -51.93 -0.37 -0.46 16 31 H 0.08 -0.25 8.12 -51.93 -0.42 -0.68 16 32 H 0.08 -0.29 8.12 -51.93 -0.42 -0.71 16 33 H 0.07 -0.19 7.41 -51.93 -0.38 -0.57 16 34 H 0.04 -0.10 7.33 -51.93 -0.38 -0.48 16 35 H 0.08 0.03 7.77 -51.93 -0.40 -0.38 16 36 H 0.36 -0.03 7.48 45.56 0.34 0.31 16 37 H -0.25 -0.73 7.11 56.52 0.40 -0.33 16 38 H -0.25 -1.11 6.81 56.52 0.38 -0.72 16 39 H 0.14 0.66 4.50 -52.49 -0.24 0.43 16 40 H 0.40 -1.35 6.72 -40.82 -0.27 -1.62 16 41 H 0.11 -0.25 8.10 -51.93 -0.42 -0.68 16 42 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 43 H 0.12 -0.05 5.64 -52.49 -0.30 -0.34 16 44 H 0.12 -0.15 8.06 -52.49 -0.42 -0.58 16 45 H 0.13 -0.17 8.06 -52.49 -0.42 -0.60 16 46 H 0.13 -0.17 8.06 -52.48 -0.42 -0.59 16 47 H 0.13 0.07 8.06 -52.49 -0.42 -0.35 16 48 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 49 H 0.11 -0.05 8.11 -51.93 -0.42 -0.47 16 50 H 0.13 -0.50 6.39 -52.49 -0.34 -0.84 16 51 H 0.13 -0.34 6.99 -52.49 -0.37 -0.71 16 LS Contribution 422.24 15.07 6.36 6.36 Total: 0.00 -7.45 422.24 -14.21 -21.66 By element: Atomic # 1 Polarization: -5.62 SS G_CDS: -7.31 Total: -12.93 kcal Atomic # 6 Polarization: 0.77 SS G_CDS: -4.43 Total: -3.66 kcal Atomic # 7 Polarization: 1.11 SS G_CDS: -0.97 Total: 0.13 kcal Atomic # 8 Polarization: -4.59 SS G_CDS: -0.36 Total: -4.96 kcal Atomic # 14 Polarization: 0.98 SS G_CDS: -5.17 Total: -4.19 kcal Atomic # 16 Polarization: -0.09 SS G_CDS: -2.34 Total: -2.42 kcal Total LS contribution 6.36 Total: 6.36 kcal Total: -7.45 -14.21 -21.66 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525224_13422196.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.504 kcal (2) G-P(sol) polarization free energy of solvation -7.449 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.055 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.212 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.662 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.843 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds