Wall clock time and date at job start Sat Mar 6 2021 19:47:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86301 * 109.46997 * 2 1 4 4 C 1.50695 * 109.47413 * 239.99722 * 2 1 3 5 5 C 1.38714 * 120.03037 * 284.97715 * 4 2 1 6 6 O 1.35901 * 120.05102 * 0.04686 * 5 4 2 7 7 C 1.42904 * 116.99755 * 180.02562 * 6 5 4 8 8 C 1.50697 * 109.46807 * 179.97438 * 7 6 5 9 9 O 1.21279 * 120.00366 * 0.02562 * 8 7 6 10 10 N 1.34783 * 119.99562 * 179.97438 * 8 7 6 11 11 C 1.46503 * 119.99741 * 179.97438 * 10 8 7 12 12 H 1.08996 * 112.84751 * 336.19432 * 11 10 8 13 13 C 1.53786 * 113.61076 * 107.50286 * 11 10 8 14 14 C 1.53777 * 87.08179 * 89.11670 * 13 11 10 15 15 H 1.09003 * 113.68642 * 270.87003 * 14 13 11 16 16 S 1.81396 * 113.61754 * 139.98132 * 14 13 11 17 17 C 1.76200 * 103.00237 * 87.49724 * 16 14 13 18 18 C 1.38978 * 120.07934 * 359.73028 * 17 16 14 19 19 C 1.38083 * 119.91505 * 179.72249 * 18 17 16 20 20 C 1.38299 * 120.08408 * 0.56986 * 19 18 17 21 21 C 1.38306 * 120.15700 * 359.67883 * 20 19 18 22 22 C 1.38077 * 120.08263 * 0.04750 * 21 20 19 23 23 C 1.53777 * 113.61294 * 204.99605 * 11 10 8 24 24 C 1.38749 * 119.89136 * 180.02562 * 5 4 2 25 25 C 1.38126 * 119.94135 * 359.97438 * 24 5 4 26 26 C 1.38290 * 120.05768 * 0.02562 * 25 24 5 27 27 C 1.38165 * 120.02630 * 104.99695 * 4 2 1 28 28 H 0.96699 * 113.99544 * 180.02562 * 1 2 3 29 29 H 1.09002 * 109.46755 * 119.99574 * 2 1 3 30 30 H 1.48502 * 110.00025 * 58.67803 * 3 2 1 31 31 H 1.48497 * 110.00178 * 179.97438 * 3 2 1 32 32 H 1.09003 * 109.46792 * 299.99749 * 7 6 5 33 33 H 1.08993 * 109.47273 * 59.99547 * 7 6 5 34 34 H 0.97003 * 120.00100 * 359.97438 * 10 8 7 35 35 H 1.09004 * 113.60608 * 203.66326 * 13 11 10 36 36 H 1.09000 * 113.61710 * 334.56084 * 13 11 10 37 37 H 1.08000 * 120.03941 * 359.97438 * 18 17 16 38 38 H 1.08005 * 119.95554 * 180.27424 * 19 18 17 39 39 H 1.07998 * 119.92189 * 179.70458 * 20 19 18 40 40 H 1.08002 * 119.95976 * 180.02562 * 21 20 19 41 41 H 1.07998 * 120.04057 * 179.97438 * 22 21 20 42 42 H 1.09003 * 113.61203 * 25.43193 * 23 11 10 43 43 H 1.08998 * 113.61637 * 156.25439 * 23 11 10 44 44 H 1.07998 * 120.02700 * 180.02562 * 24 5 4 45 45 H 1.08005 * 119.97091 * 180.02562 * 25 24 5 46 46 H 1.07995 * 119.94278 * 180.27458 * 26 25 24 47 47 H 1.07997 * 119.97398 * 359.97438 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7104 -1.2304 5 6 1.8703 -2.0941 -1.3066 6 8 1.3564 -2.8107 -0.2725 7 6 1.3253 -4.2317 -0.4201 8 6 0.7278 -4.8521 0.8164 9 8 0.3640 -4.1469 1.7336 10 7 0.5968 -6.1908 0.9027 11 6 0.0165 -6.7940 2.1050 12 1 0.1110 -6.1583 2.9853 13 6 -1.4021 -7.3485 1.8926 14 6 -0.7380 -8.6738 1.4836 15 1 -0.5121 -8.7403 0.4193 16 16 -1.5966 -10.1419 2.1144 17 6 -2.7991 -10.4643 0.8675 18 6 -2.8835 -9.6403 -0.2484 19 6 -3.8233 -9.8994 -1.2263 20 6 -4.6877 -10.9704 -1.0906 21 6 -4.6100 -11.7895 0.0211 22 6 -3.6691 -11.5398 1.0003 23 6 0.4635 -8.2460 2.3428 24 6 2.3342 -2.7453 -2.4406 25 6 2.8551 -2.0146 -3.4907 26 6 2.9150 -0.6352 -3.4122 27 6 2.4538 0.0159 -2.2833 28 1 -0.3932 -0.8834 0.0004 29 1 1.7923 -0.5138 0.8901 30 1 1.5354 2.4771 1.1921 31 1 3.5349 1.7703 0.0006 32 1 0.7195 -4.4937 -1.2876 33 1 2.3399 -4.6048 -0.5594 34 1 0.8868 -6.7548 0.1687 35 1 -1.9858 -7.4176 2.8106 36 1 -1.9438 -6.8627 1.0810 37 1 -2.2121 -8.8007 -0.3526 38 1 -3.8865 -9.2621 -2.0960 39 1 -5.4250 -11.1678 -1.8547 40 1 -5.2864 -12.6252 0.1236 41 1 -3.6093 -12.1796 1.8683 42 1 1.4279 -8.4850 1.8946 43 1 0.3912 -8.5602 3.3841 44 1 2.2872 -3.8225 -2.5025 45 1 3.2159 -2.5210 -4.3738 46 1 3.3185 -0.0655 -4.2361 47 1 2.5016 1.0932 -2.2244 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12525224_2989392.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:47:33 Heat of formation + Delta-G solvation = -14.623743 kcal Electronic energy + Delta-G solvation = -29846.610175 eV Core-core repulsion = 25667.585344 eV Total energy + Delta-G solvation = -4179.024831 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.123 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -41.83505 -41.17113 -39.91459 -39.52159 -38.35763 -37.32933 -34.62414 -32.75421 -32.12318 -31.95324 -31.38379 -29.70462 -27.11453 -26.62745 -26.51499 -23.93167 -23.71691 -23.41797 -22.64646 -22.02024 -20.89085 -19.52718 -18.79502 -18.61681 -18.14179 -17.87293 -17.61404 -17.22435 -16.89771 -16.70213 -16.46854 -16.00155 -15.84640 -15.76672 -15.56277 -15.26088 -15.13951 -14.95894 -14.66200 -14.50427 -14.28220 -14.05056 -13.90744 -13.85058 -13.80108 -13.44202 -13.30745 -12.80662 -12.61140 -12.34894 -12.34143 -12.21429 -12.07334 -11.91191 -11.80988 -11.20153 -11.16315 -11.07625 -10.93450 -10.79721 -10.37265 -10.01534 -10.01364 -9.31311 -8.42799 -4.80565 0.17130 0.18915 0.31156 0.34175 0.44903 1.20802 1.28630 1.31959 1.50977 1.73337 2.11677 2.35277 2.62385 2.69582 3.05068 3.07114 3.26591 3.44847 3.55590 3.58370 3.68431 3.73924 3.74588 3.82159 3.90799 3.97251 4.04771 4.10493 4.18493 4.22897 4.26014 4.37826 4.42004 4.42362 4.45374 4.48548 4.52357 4.59023 4.66264 4.70257 4.76331 4.88005 4.95246 5.15667 5.22253 5.22917 5.28809 5.36406 5.42902 5.49814 5.59083 5.87347 6.05731 6.19949 6.71849 6.89961 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.073 4.073 3 Si 0.744 3.256 4 C -0.139 4.139 5 C 0.134 3.866 6 O -0.291 6.291 7 C 0.041 3.959 8 C 0.520 3.480 9 O -0.506 6.506 10 N -0.712 5.712 11 C 0.127 3.873 12 H 0.116 0.884 13 C -0.136 4.136 14 C -0.108 4.108 15 H 0.111 0.889 16 S -0.103 6.103 17 C -0.084 4.084 18 C -0.133 4.133 19 C -0.101 4.101 20 C -0.124 4.124 21 C -0.100 4.100 22 C -0.102 4.102 23 C -0.114 4.114 24 C -0.207 4.207 25 C -0.076 4.076 26 C -0.147 4.147 27 C -0.071 4.071 28 H 0.367 0.633 29 H 0.075 0.925 30 H -0.256 1.256 31 H -0.252 1.252 32 H 0.096 0.904 33 H 0.096 0.904 34 H 0.403 0.597 35 H 0.108 0.892 36 H 0.079 0.921 37 H 0.121 0.879 38 H 0.125 0.875 39 H 0.126 0.874 40 H 0.129 0.871 41 H 0.128 0.872 42 H 0.088 0.912 43 H 0.109 0.891 44 H 0.129 0.871 45 H 0.129 0.871 46 H 0.132 0.868 47 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.741 -3.478 -5.751 6.943 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.182 4.182 3 Si 0.643 3.357 4 C -0.140 4.140 5 C 0.089 3.911 6 O -0.204 6.204 7 C -0.038 4.038 8 C 0.304 3.696 9 O -0.379 6.379 10 N -0.366 5.366 11 C 0.020 3.980 12 H 0.133 0.867 13 C -0.177 4.177 14 C -0.237 4.237 15 H 0.129 0.871 16 S 0.144 5.856 17 C -0.196 4.196 18 C -0.156 4.156 19 C -0.121 4.121 20 C -0.145 4.145 21 C -0.120 4.120 22 C -0.125 4.125 23 C -0.154 4.154 24 C -0.226 4.226 25 C -0.094 4.094 26 C -0.165 4.165 27 C -0.088 4.088 28 H 0.215 0.785 29 H 0.092 0.908 30 H -0.180 1.180 31 H -0.177 1.177 32 H 0.114 0.886 33 H 0.113 0.887 34 H 0.237 0.763 35 H 0.126 0.874 36 H 0.098 0.902 37 H 0.139 0.861 38 H 0.143 0.857 39 H 0.144 0.856 40 H 0.147 0.853 41 H 0.146 0.854 42 H 0.107 0.893 43 H 0.127 0.873 44 H 0.147 0.853 45 H 0.147 0.853 46 H 0.150 0.850 47 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 2.266 -2.203 -3.354 4.608 hybrid contribution -0.136 -1.823 -1.289 2.237 sum 2.130 -4.026 -4.643 6.504 Atomic orbital electron populations 1.86699 1.16819 1.33381 1.97157 1.25374 0.84994 1.12832 0.94964 0.93155 0.78536 0.76226 0.87798 1.19734 1.04862 0.90599 0.98795 1.18822 0.94683 0.90740 0.86896 1.86101 1.77923 1.17187 1.39142 1.22450 1.02745 0.81131 0.97431 1.20027 0.78915 0.82346 0.88279 1.90805 1.47173 1.60911 1.39015 1.45481 1.64591 1.06307 1.20207 1.21811 0.93369 0.93909 0.88934 0.86653 1.23786 0.96932 0.93304 1.03694 1.25087 1.00150 0.95327 1.03172 0.87102 1.85578 1.36374 1.35503 1.28100 1.21748 1.00373 0.99315 0.98181 1.21148 1.00477 0.99762 0.94242 1.21098 0.95032 0.97491 0.98459 1.21250 0.99482 0.95478 0.98275 1.21157 0.97783 0.99373 0.93672 1.20812 0.95287 0.96638 0.99805 1.23176 0.96824 0.93846 1.01552 1.21250 1.06211 1.00345 0.94775 1.21028 0.96527 0.94127 0.97734 1.21128 1.02203 0.94582 0.98554 1.20868 0.96305 0.99318 0.92309 0.78504 0.90798 1.18050 1.17654 0.88595 0.88655 0.76272 0.87372 0.90212 0.86077 0.85680 0.85617 0.85322 0.85449 0.89347 0.87280 0.85313 0.85269 0.85025 0.84491 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.04 12.65 -35.23 -0.45 -2.48 16 2 C -0.07 -0.21 2.33 36.00 0.08 -0.12 16 3 Si 0.74 0.95 30.17 -169.99 -5.13 -4.17 16 4 C -0.14 -0.27 5.28 -104.48 -0.55 -0.82 16 5 C 0.13 0.19 6.62 -39.22 -0.26 -0.07 16 6 O -0.29 -0.51 8.57 -39.34 -0.34 -0.84 16 7 C 0.04 -0.08 5.22 36.00 0.19 0.11 16 8 C 0.52 0.02 7.91 -10.98 -0.09 -0.07 16 9 O -0.51 -2.54 16.10 -14.35 -0.23 -2.77 16 10 N -0.71 2.16 5.26 -53.02 -0.28 1.88 16 11 C 0.13 -0.27 4.32 -67.12 -0.29 -0.56 16 12 H 0.12 -0.04 7.46 -51.93 -0.39 -0.42 16 13 C -0.14 0.27 7.35 -25.92 -0.19 0.08 16 14 C -0.11 0.27 2.88 -25.92 -0.07 0.19 16 15 H 0.11 -0.38 6.88 -51.93 -0.36 -0.74 16 16 S -0.10 -0.02 21.72 -107.50 -2.33 -2.36 16 17 C -0.08 -0.10 6.11 -39.03 -0.24 -0.34 16 18 C -0.13 -0.04 9.32 -39.36 -0.37 -0.41 16 19 C -0.10 0.00 10.04 -39.62 -0.40 -0.40 16 20 C -0.12 0.00 10.04 -39.53 -0.40 -0.40 16 21 C -0.10 -0.03 10.04 -39.62 -0.40 -0.43 16 22 C -0.10 -0.11 9.79 -39.37 -0.39 -0.50 16 23 C -0.11 0.38 7.41 -25.92 -0.19 0.18 16 24 C -0.21 0.13 9.04 -39.43 -0.36 -0.22 16 25 C -0.08 0.08 10.04 -39.60 -0.40 -0.32 16 26 C -0.15 0.10 10.04 -39.56 -0.40 -0.29 16 27 C -0.07 -0.02 8.66 -39.61 -0.34 -0.36 16 28 H 0.37 0.92 8.61 45.56 0.39 1.31 16 29 H 0.07 0.29 7.83 -51.93 -0.41 -0.12 16 30 H -0.26 -1.10 7.11 56.52 0.40 -0.70 16 31 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 32 H 0.10 -0.43 7.66 -51.93 -0.40 -0.83 16 33 H 0.10 -0.41 7.66 -51.93 -0.40 -0.80 16 34 H 0.40 -2.43 8.70 -40.82 -0.36 -2.79 16 35 H 0.11 -0.15 8.10 -51.93 -0.42 -0.57 16 36 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 37 H 0.12 -0.17 5.64 -52.49 -0.30 -0.47 16 38 H 0.13 -0.24 8.06 -52.48 -0.42 -0.66 16 39 H 0.13 -0.23 8.06 -52.49 -0.42 -0.65 16 40 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 41 H 0.13 0.02 8.06 -52.49 -0.42 -0.40 16 42 H 0.09 -0.37 8.14 -51.93 -0.42 -0.80 16 43 H 0.11 -0.33 8.10 -51.93 -0.42 -0.75 16 44 H 0.13 -0.43 6.30 -52.49 -0.33 -0.76 16 45 H 0.13 -0.41 8.06 -52.48 -0.42 -0.83 16 46 H 0.13 -0.37 8.06 -52.49 -0.42 -0.80 16 47 H 0.14 -0.26 5.13 -52.49 -0.27 -0.53 16 LS Contribution 403.85 15.07 6.09 6.09 Total: 0.00 -9.13 403.85 -13.95 -23.08 By element: Atomic # 1 Polarization: -7.44 SS G_CDS: -6.23 Total: -13.66 kcal Atomic # 6 Polarization: 0.29 SS G_CDS: -5.05 Total: -4.76 kcal Atomic # 7 Polarization: 2.16 SS G_CDS: -0.28 Total: 1.88 kcal Atomic # 8 Polarization: -5.08 SS G_CDS: -1.01 Total: -6.10 kcal Atomic # 14 Polarization: 0.95 SS G_CDS: -5.13 Total: -4.17 kcal Atomic # 16 Polarization: -0.02 SS G_CDS: -2.33 Total: -2.36 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -9.13 -13.95 -23.08 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525224_2989392.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.458 kcal (2) G-P(sol) polarization free energy of solvation -9.132 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.674 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.950 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.082 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.624 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds