Wall clock time and date at job start Sat Mar 6 2021 19:48:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.37637 * 125.67179 * 2 1 4 4 C 1.46676 * 126.22897 * 0.02562 * 3 2 1 5 5 O 1.21694 * 119.99878 * 5.09403 * 4 3 2 6 6 N 1.34773 * 120.00011 * 185.09464 * 4 3 2 7 7 C 1.46499 * 120.00210 * 185.14401 * 6 4 3 8 8 H 1.09004 * 112.84870 * 23.80356 * 7 6 4 9 9 C 1.53774 * 113.61670 * 155.00032 * 7 6 4 10 10 C 1.53782 * 87.08111 * 89.12015 * 9 7 6 11 11 H 1.09002 * 113.61139 * 270.80064 * 10 9 7 12 12 S 1.81402 * 113.61408 * 139.98333 * 10 9 7 13 13 C 1.76203 * 102.99804 * 174.99779 * 12 10 9 14 14 C 1.38980 * 120.08247 * 359.72657 * 13 12 10 15 15 C 1.38073 * 119.91966 * 179.71937 * 14 13 12 16 16 C 1.38311 * 120.08054 * 0.57391 * 15 14 13 17 17 C 1.38298 * 120.16040 * 359.67775 * 16 15 14 18 18 C 1.38087 * 120.08101 * 0.04301 * 17 16 15 19 19 C 1.53774 * 87.08097 * 25.43319 * 10 9 7 20 20 C 1.37893 * 107.54837 * 179.69614 * 3 2 1 21 21 C 1.39877 * 107.08800 * 0.42288 * 20 3 2 22 22 Br 1.89102 * 126.07366 * 179.83807 * 21 20 3 23 23 C 1.35505 * 107.85367 * 359.57296 * 21 20 3 24 24 C 1.50700 * 125.56978 * 180.26680 * 23 21 20 25 25 O 1.42908 * 109.47147 * 149.97623 * 24 23 21 26 26 Si 1.86294 * 109.47551 * 29.97396 * 24 23 21 27 27 H 1.09004 * 109.47055 * 265.42619 * 1 2 3 28 28 H 1.08999 * 109.47597 * 25.42362 * 1 2 3 29 29 H 1.08995 * 109.47272 * 145.42953 * 1 2 3 30 30 H 0.97003 * 119.99982 * 5.14595 * 6 4 3 31 31 H 1.09003 * 113.61439 * 203.66654 * 9 7 6 32 32 H 1.09000 * 113.61813 * 334.48924 * 9 7 6 33 33 H 1.08001 * 120.03449 * 359.97438 * 14 13 12 34 34 H 1.08002 * 119.96005 * 180.27586 * 15 14 13 35 35 H 1.08001 * 119.91512 * 179.70200 * 16 15 14 36 36 H 1.07994 * 119.96091 * 180.02562 * 17 16 15 37 37 H 1.08001 * 120.04063 * 179.97438 * 18 17 16 38 38 H 1.09004 * 113.61562 * 220.01917 * 19 10 9 39 39 H 1.08999 * 113.61304 * 89.11788 * 19 10 9 40 40 H 1.07994 * 126.45420 * 180.26304 * 20 3 2 41 41 H 1.09001 * 109.47207 * 269.97515 * 24 23 21 42 42 H 0.96701 * 113.99613 * 299.99919 * 25 24 23 43 43 H 1.48504 * 109.99892 * 58.67978 * 26 24 23 44 44 H 1.48494 * 110.00370 * 179.97438 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2676 1.1181 0.0000 4 6 1.8120 2.5123 0.0005 5 8 0.6252 2.7645 0.0946 6 7 2.7076 3.5140 -0.1032 7 6 2.2660 4.9062 0.0104 8 1 1.3343 5.0107 0.5666 9 6 3.3723 5.8675 0.4758 10 6 3.7320 6.0469 -1.0085 11 1 4.4626 5.3238 -1.3712 12 16 4.1507 7.7550 -1.4534 13 6 4.6500 7.6149 -3.1374 14 6 4.6466 6.3744 -3.7641 15 6 5.0330 6.2694 -5.0855 16 6 5.4344 7.3949 -5.7820 17 6 5.4440 8.6301 -5.1601 18 6 5.0535 8.7437 -3.8405 19 6 2.2762 5.6668 -1.3261 20 6 3.5781 0.6892 0.0070 21 6 3.5529 -0.7093 0.0013 22 35 5.0610 -1.8502 0.0025 23 6 2.2558 -1.1014 0.0008 24 6 1.7714 -2.5285 0.0012 25 8 0.5133 -2.6043 0.6747 26 14 3.0120 -3.6053 0.8797 27 1 -0.3633 -0.0820 1.0244 28 1 -0.3634 0.9281 -0.4412 29 1 -0.3633 -0.8462 -0.5831 30 1 3.6447 3.3132 -0.2531 31 1 2.9931 6.7748 0.9460 32 1 4.1543 5.3829 1.0604 33 1 4.3382 5.4944 -3.2193 34 1 5.0263 5.3064 -5.5745 35 1 5.7406 7.3089 -6.8141 36 1 5.7577 9.5069 -5.7071 37 1 5.0616 9.7086 -3.3554 38 1 2.1740 5.0199 -2.1975 39 1 1.5974 6.5193 -1.3486 40 1 4.4582 1.3151 0.0128 41 1 1.6547 -2.8728 -1.0264 42 1 0.5424 -2.3126 1.5962 43 1 3.2039 -3.1267 2.2723 44 1 2.5457 -5.0151 0.8874 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12525224_5000100.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:48:34 Heat of formation + Delta-G solvation = 40.377677 kcal Electronic energy + Delta-G solvation = -28980.245671 eV Core-core repulsion = 24845.270300 eV Total energy + Delta-G solvation = -4134.975371 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 423.029 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -42.97760 -41.17354 -39.86994 -39.19633 -37.97124 -35.06005 -34.34376 -32.39319 -32.05907 -31.91453 -31.18626 -27.73734 -27.40756 -27.06484 -26.09031 -23.78236 -23.63005 -23.29336 -21.83634 -20.95968 -20.56146 -19.13164 -18.75291 -18.45987 -17.81982 -17.28016 -17.09224 -16.67097 -16.38389 -16.13975 -15.98036 -15.79333 -15.48586 -15.39546 -15.15970 -14.94102 -14.67180 -14.56722 -14.45878 -14.18918 -14.05744 -13.84153 -13.77838 -13.69147 -13.29842 -13.21146 -12.71077 -12.54965 -12.31556 -12.19558 -12.15128 -12.03400 -11.77590 -11.54798 -11.21508 -11.12288 -10.88867 -10.76469 -10.35507 -9.97795 -9.95439 -9.39973 -8.39201 -4.61716 0.09828 0.22426 0.30117 0.37751 0.48743 0.87355 1.15899 1.32538 1.44427 1.64649 1.99835 2.06608 2.15544 2.73100 3.01890 3.09855 3.10594 3.25495 3.40591 3.50999 3.63150 3.68031 3.86119 3.94621 4.02915 4.13892 4.18853 4.26517 4.27232 4.32694 4.41308 4.45620 4.47356 4.49810 4.51976 4.56142 4.63057 4.71856 4.74011 4.80865 4.98904 5.11027 5.26005 5.29651 5.39951 5.50748 5.53248 5.72188 5.90850 6.13668 6.20119 6.92422 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.382 5.382 3 C -0.041 4.041 4 C 0.597 3.403 5 O -0.535 6.535 6 N -0.702 5.702 7 C 0.129 3.871 8 H 0.115 0.885 9 C -0.115 4.115 10 C -0.108 4.108 11 H 0.112 0.888 12 S -0.103 6.103 13 C -0.083 4.083 14 C -0.132 4.132 15 C -0.101 4.101 16 C -0.125 4.125 17 C -0.101 4.101 18 C -0.102 4.102 19 C -0.136 4.136 20 C -0.103 4.103 21 C -0.181 4.181 22 Br 0.074 6.926 23 C 0.065 3.935 24 C -0.044 4.044 25 O -0.533 6.533 26 Si 0.582 3.418 27 H 0.081 0.919 28 H 0.106 0.894 29 H 0.097 0.903 30 H 0.404 0.596 31 H 0.109 0.891 32 H 0.089 0.911 33 H 0.122 0.878 34 H 0.125 0.875 35 H 0.126 0.874 36 H 0.128 0.872 37 H 0.127 0.873 38 H 0.079 0.921 39 H 0.108 0.892 40 H 0.158 0.842 41 H 0.130 0.870 42 H 0.378 0.622 43 H -0.248 1.248 44 H -0.231 1.231 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.298 0.716 -1.322 3.624 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.053 5.053 3 C -0.155 4.155 4 C 0.385 3.615 5 O -0.412 6.412 6 N -0.353 5.353 7 C 0.022 3.978 8 H 0.133 0.867 9 C -0.154 4.154 10 C -0.237 4.237 11 H 0.130 0.870 12 S 0.144 5.856 13 C -0.196 4.196 14 C -0.156 4.156 15 C -0.121 4.121 16 C -0.145 4.145 17 C -0.120 4.120 18 C -0.126 4.126 19 C -0.177 4.177 20 C -0.129 4.129 21 C -0.267 4.267 22 Br 0.157 6.843 23 C -0.058 4.058 24 C -0.154 4.154 25 O -0.338 6.338 26 Si 0.478 3.522 27 H 0.100 0.900 28 H 0.124 0.876 29 H 0.115 0.885 30 H 0.240 0.760 31 H 0.127 0.873 32 H 0.108 0.892 33 H 0.140 0.860 34 H 0.143 0.857 35 H 0.144 0.856 36 H 0.146 0.854 37 H 0.145 0.855 38 H 0.098 0.902 39 H 0.126 0.874 40 H 0.176 0.824 41 H 0.147 0.853 42 H 0.225 0.775 43 H -0.172 1.172 44 H -0.154 1.154 Dipole moment (debyes) X Y Z Total from point charges 2.434 0.736 -0.307 2.562 hybrid contribution -0.556 -0.444 -0.348 0.792 sum 1.878 0.292 -0.655 2.011 Atomic orbital electron populations 1.22502 0.74288 1.06135 1.04658 1.43819 1.07513 1.03598 1.50393 1.19991 0.89740 0.87856 1.17913 1.16793 0.85583 0.83120 0.76041 1.90837 1.15916 1.84516 1.49973 1.45281 1.11243 1.04930 1.73864 1.21807 0.99110 0.79302 0.97610 0.86692 1.23185 0.98657 1.00200 0.93395 1.25093 1.00754 0.96790 1.01103 0.87019 1.85555 1.81593 1.11779 1.06679 1.21745 1.03593 0.96638 0.97621 1.21158 1.02654 0.95885 0.95871 1.21104 0.98068 0.98946 0.93934 1.21248 1.00250 0.92713 1.00299 1.21149 0.98631 0.97962 0.94284 1.20811 0.99947 0.97276 0.94546 1.23781 0.94312 1.01058 0.98552 1.21151 0.95270 0.92652 1.03866 1.20523 0.90518 0.94363 1.21266 1.96319 1.33615 1.56898 1.97444 1.20955 0.89314 0.90235 1.05257 1.24745 0.93847 0.92794 1.04044 1.86581 1.29450 1.88751 1.29060 0.93321 0.92428 0.80687 0.85723 0.90022 0.87566 0.88467 0.76013 0.87272 0.89230 0.86010 0.85660 0.85646 0.85362 0.85475 0.90190 0.87412 0.82423 0.85250 0.77465 1.17171 1.15428 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.01 9.28 59.85 0.56 0.55 16 2 N -0.38 -0.29 3.16 -115.59 -0.37 -0.66 16 3 C -0.04 -0.02 6.88 -81.98 -0.56 -0.58 16 4 C 0.60 0.47 7.77 -12.86 -0.10 0.37 16 5 O -0.53 -2.05 14.28 5.19 0.07 -1.97 16 6 N -0.70 1.54 5.24 -54.33 -0.28 1.26 16 7 C 0.13 -0.28 4.29 -67.12 -0.29 -0.57 16 8 H 0.12 -0.09 7.53 -51.93 -0.39 -0.48 16 9 C -0.11 0.38 7.42 -25.92 -0.19 0.18 16 10 C -0.11 0.25 2.89 -25.92 -0.07 0.18 16 11 H 0.11 -0.35 6.85 -51.93 -0.36 -0.70 16 12 S -0.10 -0.02 21.72 -107.50 -2.33 -2.36 16 13 C -0.08 -0.11 6.11 -39.03 -0.24 -0.35 16 14 C -0.13 -0.07 9.32 -39.37 -0.37 -0.43 16 15 C -0.10 -0.02 10.04 -39.62 -0.40 -0.42 16 16 C -0.12 -0.02 10.04 -39.53 -0.40 -0.42 16 17 C -0.10 -0.04 10.04 -39.61 -0.40 -0.44 16 18 C -0.10 -0.12 9.79 -39.36 -0.39 -0.51 16 19 C -0.14 0.26 7.38 -25.92 -0.19 0.07 16 20 C -0.10 0.11 10.33 -39.09 -0.40 -0.30 16 21 C -0.18 0.03 6.16 -39.94 -0.25 -0.22 16 22 Br 0.07 -0.09 28.24 -68.01 -1.92 -2.02 16 23 C 0.07 0.03 6.15 -81.91 -0.50 -0.48 16 24 C -0.04 0.00 2.90 36.01 0.10 0.10 16 25 O -0.53 -0.19 10.50 -35.23 -0.37 -0.56 16 26 Si 0.58 0.41 27.10 -169.99 -4.61 -4.20 16 27 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 28 H 0.11 0.11 6.18 -51.93 -0.32 -0.22 16 29 H 0.10 -0.06 7.11 -51.93 -0.37 -0.43 16 30 H 0.40 -1.83 7.65 -40.82 -0.31 -2.14 16 31 H 0.11 -0.35 8.10 -51.93 -0.42 -0.77 16 32 H 0.09 -0.37 8.14 -51.93 -0.42 -0.79 16 33 H 0.12 -0.13 5.64 -52.49 -0.30 -0.43 16 34 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 35 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 36 H 0.13 -0.20 8.06 -52.49 -0.42 -0.62 16 37 H 0.13 0.03 8.06 -52.49 -0.42 -0.39 16 38 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 39 H 0.11 -0.16 8.10 -51.93 -0.42 -0.58 16 40 H 0.16 -0.62 7.49 -52.49 -0.39 -1.02 16 41 H 0.13 -0.12 7.96 -51.93 -0.41 -0.54 16 42 H 0.38 -0.67 8.70 45.56 0.40 -0.28 16 43 H -0.25 -0.75 7.11 56.52 0.40 -0.35 16 44 H -0.23 -0.76 7.11 56.52 0.40 -0.36 16 LS Contribution 389.20 15.07 5.87 5.87 Total: 0.00 -6.78 389.20 -13.48 -20.26 By element: Atomic # 1 Polarization: -6.93 SS G_CDS: -5.45 Total: -12.39 kcal Atomic # 6 Polarization: 0.85 SS G_CDS: -4.09 Total: -3.24 kcal Atomic # 7 Polarization: 1.25 SS G_CDS: -0.65 Total: 0.60 kcal Atomic # 8 Polarization: -2.24 SS G_CDS: -0.30 Total: -2.53 kcal Atomic # 14 Polarization: 0.41 SS G_CDS: -4.61 Total: -4.20 kcal Atomic # 16 Polarization: -0.02 SS G_CDS: -2.33 Total: -2.36 kcal Atomic # 35 Polarization: -0.09 SS G_CDS: -1.92 Total: -2.02 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -6.78 -13.48 -20.26 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525224_5000100.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.640 kcal (2) G-P(sol) polarization free energy of solvation -6.778 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.862 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.484 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.262 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.378 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds