Wall clock time and date at job start Sat Mar 6 2021 19:48:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.33813 * 122.44931 * 2 1 4 4 C 1.50700 * 124.52513 * 0.02840 * 3 2 1 5 5 O 1.42895 * 109.47183 * 246.71586 * 4 3 2 6 6 Si 1.86299 * 109.47247 * 126.71284 * 4 3 2 7 7 S 1.70623 * 110.95331 * 179.78712 * 3 2 1 8 8 C 1.75833 * 91.56078 * 0.30788 * 7 3 2 9 9 C 1.46582 * 125.45212 * 179.97438 * 8 7 3 10 10 O 1.21706 * 119.99754 * 179.69267 * 9 8 7 11 11 N 1.34772 * 120.00428 * 359.69696 * 9 8 7 12 12 C 1.46501 * 120.00242 * 179.97438 * 11 9 8 13 13 H 1.09000 * 112.90523 * 336.25177 * 12 11 9 14 14 C 1.54043 * 113.61508 * 107.61656 * 12 11 9 15 15 C 1.53780 * 87.07862 * 89.07580 * 14 12 11 16 16 H 1.09004 * 113.61274 * 270.87891 * 15 14 12 17 17 S 1.81400 * 113.61677 * 139.98330 * 15 14 12 18 18 C 1.76193 * 103.00215 * 87.49984 * 17 15 14 19 19 C 1.38972 * 120.08301 * 359.73298 * 18 17 15 20 20 C 1.38085 * 119.91776 * 179.72278 * 19 18 17 21 21 C 1.38299 * 120.07991 * 0.52362 * 20 19 18 22 22 C 1.38299 * 120.16382 * 359.76866 * 21 20 19 23 23 C 1.38084 * 120.07990 * 359.95486 * 22 21 20 24 24 C 1.53778 * 87.08106 * 25.42773 * 15 14 12 25 25 C 1.36642 * 109.08318 * 359.69639 * 8 7 3 26 26 H 1.09003 * 109.46587 * 275.12200 * 1 2 3 27 27 H 1.08993 * 109.47214 * 35.11729 * 1 2 3 28 28 H 1.09000 * 109.47499 * 155.12440 * 1 2 3 29 29 H 1.08999 * 109.46614 * 6.71262 * 4 3 2 30 30 H 0.96705 * 113.99579 * 299.99705 * 5 4 3 31 31 H 1.48500 * 109.99912 * 180.02562 * 6 4 3 32 32 H 1.48504 * 110.00136 * 301.31791 * 6 4 3 33 33 H 0.96999 * 119.99961 * 359.97438 * 11 9 8 34 34 H 1.09011 * 113.61855 * 334.52615 * 14 12 11 35 35 H 1.08996 * 113.69754 * 203.63278 * 14 12 11 36 36 H 1.08004 * 120.03707 * 359.97438 * 19 18 17 37 37 H 1.08004 * 119.95607 * 180.27024 * 20 19 18 38 38 H 1.08003 * 119.91841 * 179.74946 * 21 20 19 39 39 H 1.08000 * 119.96138 * 179.97438 * 22 21 20 40 40 H 1.07992 * 120.04156 * 179.97438 * 23 22 21 41 41 H 1.09008 * 113.61053 * 89.11823 * 24 15 14 42 42 H 1.08991 * 113.61668 * 219.93222 * 24 15 14 43 43 H 1.08006 * 123.34690 * 180.24741 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6355 2.5161 0.0006 5 8 1.9388 3.1632 -1.2368 6 14 2.3596 3.4980 1.4086 7 16 3.8970 0.7892 0.0059 8 6 3.5936 -0.9428 -0.0010 9 6 4.6231 -1.9863 -0.0006 10 8 4.3001 -3.1597 -0.0001 11 7 5.9273 -1.6463 -0.0008 12 6 6.9561 -2.6893 0.0002 13 1 6.5998 -3.6364 0.4053 14 6 7.6937 -2.8296 -1.3449 15 6 8.6843 -1.7760 -0.8219 16 1 8.3904 -0.7508 -1.0470 17 16 10.4116 -2.1258 -1.2516 18 6 10.5865 -1.3728 -2.8349 19 6 9.5065 -0.7231 -3.4204 20 6 9.6490 -0.1291 -4.6588 21 6 10.8615 -0.1895 -5.3211 22 6 11.9368 -0.8404 -4.7442 23 6 11.8034 -1.4318 -3.5036 24 6 8.2978 -2.2305 0.5955 25 6 2.2446 -1.1601 -0.0006 26 1 -0.3632 0.0918 1.0236 27 1 -0.3633 0.8405 -0.5911 28 1 -0.3634 -0.9323 -0.4323 29 1 0.5542 2.4512 0.1212 30 1 2.8856 3.2556 -1.4106 31 1 1.7858 4.8676 1.4205 32 1 2.0783 2.8189 2.6989 33 1 6.1847 -0.7111 -0.0015 34 1 7.1091 -2.4924 -2.2009 35 1 8.1415 -3.8114 -1.4986 36 1 8.5580 -0.6794 -2.9056 37 1 8.8112 0.3797 -5.1125 38 1 10.9689 0.2725 -6.2914 39 1 12.8821 -0.8859 -5.2646 40 1 12.6433 -1.9402 -3.0539 41 1 8.9103 -3.0490 0.9738 42 1 8.2023 -1.4098 1.3063 43 1 1.8019 -2.1452 -0.0003 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12525224_6739946.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:48:56 Heat of formation + Delta-G solvation = 19.790986 kcal Electronic energy + Delta-G solvation = -26337.712097 eV Core-core repulsion = 22568.014040 eV Total energy + Delta-G solvation = -3769.698058 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.080 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -41.39917 -40.11048 -39.84746 -39.10414 -37.64260 -34.51643 -32.48311 -32.04919 -31.90384 -29.97089 -27.65858 -27.02712 -26.01257 -24.42589 -23.69602 -23.41695 -22.09236 -20.89637 -20.17837 -19.62733 -18.73322 -18.03650 -17.67238 -17.55904 -16.93568 -16.49174 -16.42479 -16.12690 -15.86157 -15.79098 -15.62083 -15.21553 -14.95492 -14.86223 -14.45527 -14.41998 -14.23887 -14.17471 -13.83466 -13.75425 -13.58874 -13.28198 -13.22144 -13.09858 -12.52094 -12.29788 -12.27849 -12.16062 -12.05827 -12.00796 -11.74471 -11.21819 -11.10727 -10.87147 -10.74872 -10.30845 -9.96737 -9.78277 -9.56403 -8.37792 -5.30251 -0.73156 0.20526 0.23519 0.38752 0.50296 0.60655 0.97539 1.19616 1.34244 1.49813 1.79428 1.83388 2.06100 2.74135 3.12207 3.13971 3.18594 3.42350 3.49260 3.61253 3.65604 3.87260 3.95742 3.99085 4.06804 4.14879 4.30200 4.31064 4.36262 4.42413 4.48470 4.50574 4.53543 4.56854 4.58831 4.69892 4.74525 4.76177 4.83680 4.87405 4.99948 5.16268 5.27148 5.27592 5.31733 5.40924 5.54220 5.91886 6.21433 6.26731 6.98194 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.102 4.102 2 C -0.097 4.097 3 C -0.229 4.229 4 C -0.034 4.034 5 O -0.532 6.532 6 Si 0.676 3.324 7 S 0.200 5.800 8 C -0.261 4.261 9 C 0.597 3.403 10 O -0.519 6.519 11 N -0.712 5.712 12 C 0.126 3.874 13 H 0.117 0.883 14 C -0.137 4.137 15 C -0.109 4.109 16 H 0.111 0.889 17 S -0.102 6.102 18 C -0.083 4.083 19 C -0.132 4.132 20 C -0.101 4.101 21 C -0.125 4.125 22 C -0.101 4.101 23 C -0.102 4.102 24 C -0.115 4.115 25 C -0.042 4.042 26 H 0.073 0.927 27 H 0.072 0.928 28 H 0.074 0.926 29 H 0.128 0.872 30 H 0.377 0.623 31 H -0.239 1.239 32 H -0.247 1.247 33 H 0.399 0.601 34 H 0.079 0.921 35 H 0.108 0.892 36 H 0.122 0.878 37 H 0.126 0.874 38 H 0.125 0.875 39 H 0.128 0.872 40 H 0.127 0.873 41 H 0.109 0.891 42 H 0.088 0.912 43 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.021 3.497 0.210 4.044 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.161 4.161 2 C -0.110 4.110 3 C -0.349 4.349 4 C -0.147 4.147 5 O -0.337 6.337 6 Si 0.575 3.425 7 S 0.469 5.531 8 C -0.381 4.381 9 C 0.384 3.616 10 O -0.396 6.396 11 N -0.363 5.363 12 C 0.019 3.981 13 H 0.135 0.865 14 C -0.178 4.178 15 C -0.238 4.238 16 H 0.129 0.871 17 S 0.145 5.855 18 C -0.196 4.196 19 C -0.156 4.156 20 C -0.121 4.121 21 C -0.145 4.145 22 C -0.120 4.120 23 C -0.126 4.126 24 C -0.155 4.155 25 C -0.076 4.076 26 H 0.092 0.908 27 H 0.091 0.909 28 H 0.093 0.907 29 H 0.145 0.855 30 H 0.225 0.775 31 H -0.163 1.163 32 H -0.171 1.171 33 H 0.233 0.767 34 H 0.098 0.902 35 H 0.126 0.874 36 H 0.140 0.860 37 H 0.143 0.857 38 H 0.143 0.857 39 H 0.146 0.854 40 H 0.145 0.855 41 H 0.128 0.872 42 H 0.107 0.893 43 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 3.107 3.385 1.704 4.900 hybrid contribution -2.468 0.014 -1.127 2.713 sum 0.639 3.398 0.576 3.505 Atomic orbital electron populations 1.20629 0.89089 1.03659 1.02735 1.18703 0.98187 0.90904 1.03227 1.24456 0.98777 1.00818 1.10814 1.24657 1.03844 0.89796 0.96367 1.86581 1.29702 1.79402 1.38008 0.95158 0.90092 0.80332 0.76948 1.82610 1.03026 0.98655 1.68843 1.24443 0.97910 0.96634 1.19120 1.16892 0.81405 0.87444 0.75881 1.90876 1.81450 1.18108 1.49159 1.45509 1.05063 1.09668 1.76048 1.21863 0.86620 0.92665 0.96934 0.86487 1.23837 0.96217 0.99641 0.98080 1.25091 0.94455 1.02927 1.01306 0.87082 1.85550 1.14213 1.69350 1.16424 1.21749 0.97178 1.02215 0.98448 1.21162 0.97652 0.99977 0.96787 1.21103 0.97814 0.98627 0.94507 1.21244 0.93171 0.99823 1.00292 1.21148 0.99107 0.96944 0.94831 1.20809 0.95923 1.00599 0.95251 1.23181 0.95339 1.02866 0.94065 1.20715 0.90912 1.00099 0.95826 0.90792 0.90902 0.90701 0.85455 0.77531 1.16300 1.17109 0.76657 0.90205 0.87360 0.86007 0.85650 0.85657 0.85372 0.85479 0.87250 0.89311 0.82525 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.11 9.48 36.01 0.34 0.45 16 2 C -0.10 -0.02 5.78 -106.45 -0.62 -0.64 16 3 C -0.23 0.16 4.83 -35.86 -0.17 -0.02 16 4 C -0.03 0.04 2.77 36.01 0.10 0.14 16 5 O -0.53 0.41 12.88 -35.23 -0.45 -0.05 16 6 Si 0.68 -1.23 32.12 -169.99 -5.46 -6.69 16 7 S 0.20 -0.47 20.81 -107.50 -2.24 -2.71 16 8 C -0.26 -0.15 6.45 -36.80 -0.24 -0.39 16 9 C 0.60 1.03 7.78 -12.90 -0.10 0.93 16 10 O -0.52 -2.83 16.44 5.18 0.09 -2.75 16 11 N -0.71 0.94 5.26 -54.22 -0.29 0.65 16 12 C 0.13 -0.19 4.34 -66.98 -0.29 -0.48 16 13 H 0.12 -0.01 7.46 -51.93 -0.39 -0.40 16 14 C -0.14 0.21 7.36 -25.78 -0.19 0.02 16 15 C -0.11 0.22 2.89 -25.92 -0.07 0.15 16 16 H 0.11 -0.32 6.88 -51.93 -0.36 -0.67 16 17 S -0.10 -0.04 21.72 -107.50 -2.33 -2.37 16 18 C -0.08 -0.11 6.11 -39.03 -0.24 -0.35 16 19 C -0.13 -0.07 9.32 -39.37 -0.37 -0.43 16 20 C -0.10 -0.01 10.04 -39.62 -0.40 -0.41 16 21 C -0.12 -0.01 10.04 -39.54 -0.40 -0.41 16 22 C -0.10 -0.04 10.04 -39.62 -0.40 -0.44 16 23 C -0.10 -0.12 9.79 -39.36 -0.39 -0.51 16 24 C -0.11 0.33 7.41 -25.92 -0.19 0.14 16 25 C -0.04 -0.04 9.78 -40.44 -0.40 -0.44 16 26 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 27 H 0.07 -0.09 7.00 -51.93 -0.36 -0.45 16 28 H 0.07 -0.12 8.10 -51.93 -0.42 -0.54 16 29 H 0.13 -0.14 6.25 -51.93 -0.32 -0.46 16 30 H 0.38 -1.72 8.70 45.56 0.40 -1.33 16 31 H -0.24 -0.21 7.11 56.52 0.40 0.19 16 32 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 33 H 0.40 -1.43 7.81 -40.82 -0.32 -1.75 16 34 H 0.08 -0.07 8.14 -51.92 -0.42 -0.50 16 35 H 0.11 -0.13 8.10 -51.93 -0.42 -0.55 16 36 H 0.12 -0.13 5.64 -52.48 -0.30 -0.42 16 37 H 0.13 -0.22 8.06 -52.48 -0.42 -0.64 16 38 H 0.13 -0.21 8.06 -52.48 -0.42 -0.64 16 39 H 0.13 -0.20 8.06 -52.49 -0.42 -0.62 16 40 H 0.13 0.03 8.06 -52.49 -0.42 -0.39 16 41 H 0.11 -0.32 8.10 -51.92 -0.42 -0.74 16 42 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 43 H 0.16 0.14 8.06 -52.48 -0.42 -0.29 16 LS Contribution 386.41 15.07 5.82 5.82 Total: 0.00 -7.72 386.41 -14.37 -22.08 By element: Atomic # 1 Polarization: -5.82 SS G_CDS: -5.49 Total: -11.31 kcal Atomic # 6 Polarization: 1.32 SS G_CDS: -4.01 Total: -2.69 kcal Atomic # 7 Polarization: 0.94 SS G_CDS: -0.29 Total: 0.65 kcal Atomic # 8 Polarization: -2.42 SS G_CDS: -0.37 Total: -2.79 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: -5.46 Total: -6.69 kcal Atomic # 16 Polarization: -0.50 SS G_CDS: -4.57 Total: -5.08 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -7.72 -14.37 -22.08 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525224_6739946.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.875 kcal (2) G-P(sol) polarization free energy of solvation -7.716 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.158 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.367 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.084 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.791 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds