Wall clock time and date at job start Sat Mar 6 2021 17:53:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.35532 * 125.67460 * 2 1 4 4 C 1.35452 * 108.87222 * 180.02562 * 3 2 1 5 5 C 1.50702 * 126.07068 * 180.02562 * 4 3 2 6 6 O 1.42903 * 109.46891 * 119.96228 * 5 4 3 7 7 Si 1.86296 * 109.46926 * 359.96107 * 5 4 3 8 8 C 1.39836 * 107.86289 * 0.02562 * 4 3 2 9 9 C 1.37647 * 125.67991 * 180.02562 * 2 1 3 10 10 C 1.46678 * 126.23277 * 0.22646 * 9 2 1 11 11 O 1.21697 * 119.99939 * 354.03112 * 10 9 2 12 12 N 1.34776 * 120.00085 * 174.02905 * 10 9 2 13 13 C 1.46500 * 119.99925 * 185.19276 * 12 10 9 14 14 H 1.09000 * 112.85006 * 23.80317 * 13 12 10 15 15 C 1.53785 * 113.61491 * 154.99988 * 13 12 10 16 16 C 1.53780 * 87.08121 * 89.11335 * 15 13 12 17 17 H 1.09002 * 113.61319 * 270.80323 * 16 15 13 18 18 S 1.81399 * 113.61514 * 139.97917 * 16 15 13 19 19 O 1.42094 * 110.54533 * 296.62767 * 18 16 15 20 20 O 1.42100 * 110.53979 * 73.37558 * 18 16 15 21 21 C 1.76201 * 104.44927 * 184.99831 * 18 16 15 22 22 C 1.38231 * 119.99917 * 269.72404 * 21 18 16 23 23 C 1.38238 * 119.99663 * 179.74327 * 22 21 18 24 24 C 1.38230 * 120.00067 * 0.53801 * 23 22 21 25 25 C 1.38239 * 119.99822 * 359.73907 * 24 23 22 26 26 C 1.38229 * 120.00246 * 359.97438 * 25 24 23 27 27 C 1.53780 * 87.08069 * 25.43468 * 16 15 13 28 28 H 1.09003 * 109.47588 * 273.97162 * 1 2 3 29 29 H 1.09000 * 109.47293 * 33.97552 * 1 2 3 30 30 H 1.08997 * 109.46848 * 153.97462 * 1 2 3 31 31 H 1.08003 * 125.56637 * 0.02562 * 3 2 1 32 32 H 1.08999 * 109.47288 * 239.95837 * 5 4 3 33 33 H 0.96698 * 113.99582 * 300.00002 * 6 5 4 34 34 H 1.48498 * 110.00116 * 58.68180 * 7 5 4 35 35 H 1.48506 * 109.99821 * 179.97438 * 7 5 4 36 36 H 1.07999 * 126.45900 * 180.02562 * 8 4 3 37 37 H 0.96995 * 119.99688 * 5.18490 * 12 10 9 38 38 H 1.09001 * 113.61388 * 203.66449 * 15 13 12 39 39 H 1.08999 * 113.61476 * 334.56262 * 15 13 12 40 40 H 1.07998 * 120.00593 * 0.02562 * 22 21 18 41 41 H 1.07999 * 120.00369 * 180.29824 * 23 22 21 42 42 H 1.08001 * 120.00226 * 179.76614 * 24 23 22 43 43 H 1.08006 * 119.99830 * 179.97438 * 25 24 23 44 44 H 1.08000 * 120.00688 * 180.02562 * 26 25 24 45 45 H 1.09006 * 113.61333 * 220.01956 * 27 16 15 46 46 H 1.09001 * 113.61780 * 89.11953 * 27 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1010 0.0000 4 6 3.5521 0.7094 -0.0006 5 6 4.7536 1.6190 -0.0002 6 8 5.5398 1.3692 1.1667 7 14 4.1885 3.3942 -0.0001 8 6 3.5780 -0.6887 -0.0015 9 6 2.2678 -1.1181 -0.0005 10 6 1.8125 -2.5124 -0.0058 11 8 0.6268 -2.7657 0.0993 12 7 2.7071 -3.5131 -0.1271 13 6 2.2451 -4.8981 -0.2469 14 1 1.2285 -4.9734 -0.6327 15 6 3.2454 -5.8215 -0.9622 16 6 3.8642 -6.0912 0.4195 17 1 4.6516 -5.3876 0.6902 18 16 4.3471 -7.8211 0.6744 19 8 3.2070 -8.6682 0.6339 20 8 5.5150 -8.1282 -0.0745 21 6 4.8778 -7.8866 2.3533 22 6 6.2039 -7.6567 2.6685 23 6 6.6192 -7.7029 3.9862 24 6 5.7105 -7.9899 4.9876 25 6 4.3854 -8.2255 4.6718 26 6 3.9690 -8.1734 3.3547 27 6 2.4907 -5.7408 1.0158 28 1 -0.3634 0.0712 1.0252 29 1 -0.3634 0.8522 -0.5743 30 1 -0.3633 -0.9234 -0.4509 31 1 1.9081 2.1236 0.0004 32 1 5.3537 1.4288 -0.8901 33 1 5.0685 1.5186 1.9977 34 1 3.3431 3.6580 1.1919 35 1 5.3643 4.3015 0.0009 36 1 4.4583 -1.3143 -0.0018 37 1 3.6568 -3.3161 -0.1352 38 1 2.7835 -6.7000 -1.4128 39 1 3.9134 -5.2962 -1.6448 40 1 6.9147 -7.4365 1.8858 41 1 7.6543 -7.5185 4.2330 42 1 6.0357 -8.0297 6.0167 43 1 3.6756 -8.4501 5.4541 44 1 2.9337 -8.3570 3.1080 45 1 2.5495 -5.1503 1.9302 46 1 1.8225 -6.5972 1.1061 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12550010_10803934.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:53:19 Heat of formation + Delta-G solvation = -20.315809 kcal Electronic energy + Delta-G solvation = -31813.998385 eV Core-core repulsion = 27378.844765 eV Total energy + Delta-G solvation = -4435.153620 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.118 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -42.57810 -41.04493 -40.06646 -39.18250 -38.22831 -37.80711 -37.08984 -34.82154 -33.68317 -32.33647 -32.02858 -30.90799 -28.35671 -27.08878 -26.96604 -25.67567 -24.27362 -23.84465 -23.73422 -21.40912 -21.13883 -20.46391 -19.90601 -19.13877 -18.83415 -18.20364 -17.64816 -17.10043 -16.99529 -16.94696 -16.80760 -16.63398 -15.97231 -15.91082 -15.67393 -15.55410 -15.40568 -15.23431 -14.91433 -14.52467 -14.46084 -14.23868 -14.03892 -14.00201 -13.79856 -13.76302 -13.47500 -13.26463 -13.26117 -13.24304 -13.14270 -13.12132 -12.44087 -12.24889 -12.14783 -12.03264 -11.79776 -11.77635 -11.27835 -11.19081 -10.48041 -10.39337 -10.28800 -10.07271 -9.69287 -9.27621 -4.85865 -1.01198 -0.20193 0.26837 0.38005 1.38167 1.52352 1.58597 1.68021 1.76380 2.04853 2.23756 2.25073 2.40846 2.72555 2.88333 3.06360 3.34520 3.50981 3.54459 3.66831 3.79301 3.84516 3.86646 3.92279 4.04209 4.07182 4.23455 4.35466 4.37396 4.38836 4.41026 4.43900 4.47924 4.53785 4.67664 4.68361 4.73491 4.74701 4.79919 4.81323 4.87201 4.92527 5.05417 5.19099 5.24320 5.36517 5.37733 5.66384 5.83364 5.88718 6.15773 6.40279 6.61284 7.05998 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.060 3.940 2 N -0.412 5.412 3 C 0.035 3.965 4 C -0.216 4.216 5 C -0.044 4.044 6 O -0.551 6.551 7 Si 0.766 3.234 8 C -0.111 4.111 9 C -0.079 4.079 10 C 0.592 3.408 11 O -0.577 6.577 12 N -0.690 5.690 13 C 0.135 3.865 14 H 0.107 0.893 15 C -0.119 4.119 16 C -0.577 4.577 17 H 0.184 0.816 18 S 2.503 3.497 19 O -0.964 6.964 20 O -0.972 6.972 21 C -0.666 4.666 22 C -0.043 4.043 23 C -0.148 4.148 24 C -0.071 4.071 25 C -0.149 4.149 26 C -0.040 4.040 27 C -0.125 4.125 28 H 0.080 0.920 29 H 0.113 0.887 30 H 0.087 0.913 31 H 0.199 0.801 32 H 0.120 0.880 33 H 0.383 0.617 34 H -0.281 1.281 35 H -0.310 1.310 36 H 0.159 0.841 37 H 0.417 0.583 38 H 0.117 0.883 39 H 0.119 0.881 40 H 0.148 0.852 41 H 0.153 0.847 42 H 0.154 0.846 43 H 0.151 0.849 44 H 0.147 0.853 45 H 0.097 0.903 46 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.676 5.667 0.882 5.775 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.084 5.084 3 C -0.102 4.102 4 C -0.223 4.223 5 C -0.154 4.154 6 O -0.359 6.359 7 Si 0.672 3.328 8 C -0.137 4.137 9 C -0.191 4.191 10 C 0.381 3.619 11 O -0.458 6.458 12 N -0.342 5.342 13 C 0.028 3.972 14 H 0.125 0.875 15 C -0.158 4.158 16 C -0.689 4.689 17 H 0.201 0.799 18 S 2.688 3.312 19 O -0.961 6.961 20 O -0.969 6.969 21 C -0.754 4.754 22 C -0.062 4.062 23 C -0.166 4.166 24 C -0.089 4.089 25 C -0.167 4.167 26 C -0.059 4.059 27 C -0.165 4.165 28 H 0.099 0.901 29 H 0.132 0.868 30 H 0.106 0.894 31 H 0.215 0.785 32 H 0.138 0.862 33 H 0.232 0.768 34 H -0.208 1.208 35 H -0.238 1.238 36 H 0.176 0.824 37 H 0.255 0.745 38 H 0.135 0.865 39 H 0.138 0.862 40 H 0.166 0.834 41 H 0.170 0.830 42 H 0.171 0.829 43 H 0.169 0.831 44 H 0.165 0.835 45 H 0.116 0.884 46 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges -1.473 5.305 0.335 5.515 hybrid contribution 0.860 -0.090 1.960 2.142 sum -0.613 5.214 2.295 5.730 Atomic orbital electron populations 1.22447 0.74850 1.06116 1.04584 1.44024 1.07633 1.04799 1.51908 1.22313 0.89884 0.92517 1.05487 1.19824 0.94055 0.94763 1.13610 1.24467 0.92454 1.07960 0.90483 1.86556 1.42249 1.90354 1.16741 0.94390 0.79593 0.71976 0.86888 1.21422 0.94286 0.95157 1.02828 1.20020 0.90928 0.87488 1.20706 1.17136 0.85232 0.84151 0.75335 1.90798 1.17748 1.85234 1.52028 1.45164 1.10289 1.04857 1.73853 1.21649 0.99472 0.79821 0.96258 0.87493 1.23238 0.98154 1.01490 0.92915 1.31661 1.08611 1.21213 1.07449 0.79867 1.05090 0.73603 0.78504 0.73967 1.93538 1.52431 1.63853 1.86324 1.93532 1.49240 1.83855 1.70278 1.30454 1.03004 1.18411 1.23497 1.21230 0.93676 0.92835 0.98417 1.21678 1.01584 1.00797 0.92580 1.21914 0.93221 0.92693 1.01067 1.21678 0.97317 1.00905 0.96836 1.21209 0.99615 0.92241 0.92807 1.23303 0.91559 1.01863 0.99770 0.90129 0.86827 0.89396 0.78459 0.86209 0.76768 1.20788 1.23804 0.82379 0.74501 0.86488 0.86237 0.83406 0.82975 0.82857 0.83085 0.83493 0.88441 0.86502 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.19 10.64 127.77 1.36 1.17 16 2 N -0.41 0.12 3.16 -534.32 -1.69 -1.57 16 3 C 0.04 -0.12 9.94 83.48 0.83 0.71 16 4 C -0.22 0.45 5.44 -20.12 -0.11 0.34 16 5 C -0.04 0.12 3.02 71.24 0.22 0.34 16 6 O -0.55 -0.43 12.88 -148.98 -1.92 -2.35 16 7 Si 0.77 -3.25 30.59 68.60 2.10 -1.15 16 8 C -0.11 0.14 10.29 22.57 0.23 0.37 16 9 C -0.08 -0.11 6.88 40.35 0.28 0.17 16 10 C 0.59 1.66 7.77 86.45 0.67 2.33 16 11 O -0.58 -5.28 14.30 -4.34 -0.06 -5.34 16 12 N -0.69 2.52 5.25 -443.99 -2.33 0.19 16 13 C 0.13 -0.52 4.29 45.52 0.20 -0.33 16 14 H 0.11 -0.11 7.53 -2.39 -0.02 -0.13 16 15 C -0.12 0.81 7.42 31.12 0.23 1.04 16 16 C -0.58 3.65 4.19 31.12 0.13 3.78 16 17 H 0.18 -2.19 8.14 -2.39 -0.02 -2.21 16 18 S 2.50 4.71 5.09 -56.49 -0.29 4.42 16 19 O -0.96 -7.46 16.44 -127.65 -2.10 -9.56 16 20 O -0.97 -8.30 17.12 -127.65 -2.19 -10.49 16 21 C -0.67 -1.36 5.66 22.27 0.13 -1.24 16 22 C -0.04 -0.05 9.47 22.27 0.21 0.16 16 23 C -0.15 0.17 10.05 22.27 0.22 0.39 16 24 C -0.07 0.14 10.05 22.27 0.22 0.37 16 25 C -0.15 0.14 10.05 22.27 0.22 0.36 16 26 C -0.04 -0.05 9.47 22.27 0.21 0.16 16 27 C -0.13 0.62 7.44 31.12 0.23 0.85 16 28 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 29 H 0.11 -1.03 8.14 -2.39 -0.02 -1.04 16 30 H 0.09 0.10 6.22 -2.39 -0.01 0.09 16 31 H 0.20 -1.87 6.19 -2.91 -0.02 -1.89 16 32 H 0.12 -0.47 7.96 -2.39 -0.02 -0.49 16 33 H 0.38 -1.64 8.70 -74.06 -0.64 -2.29 16 34 H -0.28 0.20 7.11 99.48 0.71 0.91 16 35 H -0.31 -1.41 7.11 99.48 0.71 -0.70 16 36 H 0.16 -0.81 7.45 -2.91 -0.02 -0.83 16 37 H 0.42 -3.64 7.61 -92.71 -0.71 -4.35 16 38 H 0.12 -0.87 8.10 -2.39 -0.02 -0.89 16 39 H 0.12 -1.23 8.14 -2.39 -0.02 -1.24 16 40 H 0.15 -0.19 7.57 -2.91 -0.02 -0.21 16 41 H 0.15 -0.87 8.06 -2.91 -0.02 -0.90 16 42 H 0.15 -1.09 8.06 -2.91 -0.02 -1.12 16 43 H 0.15 -0.81 8.06 -2.91 -0.02 -0.83 16 44 H 0.15 -0.15 7.57 -2.91 -0.02 -0.17 16 45 H 0.10 -0.52 8.14 -2.38 -0.02 -0.54 16 46 H 0.12 -0.56 7.53 -2.39 -0.02 -0.58 16 Total: 0.00 -31.33 398.40 -3.27 -34.60 By element: Atomic # 1 Polarization: -19.45 SS G_CDS: -0.28 Total: -19.73 kcal Atomic # 6 Polarization: 5.49 SS G_CDS: 5.48 Total: 10.97 kcal Atomic # 7 Polarization: 2.64 SS G_CDS: -4.02 Total: -1.38 kcal Atomic # 8 Polarization: -21.47 SS G_CDS: -6.26 Total: -27.73 kcal Atomic # 14 Polarization: -3.25 SS G_CDS: 2.10 Total: -1.15 kcal Atomic # 16 Polarization: 4.71 SS G_CDS: -0.29 Total: 4.42 kcal Total: -31.33 -3.27 -34.60 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12550010_10803934.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.280 kcal (2) G-P(sol) polarization free energy of solvation -31.330 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.265 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.595 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.316 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds