Wall clock time and date at job start Sat Mar 6 2021 17:53:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.37651 * 125.67746 * 2 1 4 4 C 1.46684 * 126.23275 * 359.95694 * 3 2 1 5 5 O 1.21689 * 120.00213 * 4.65965 * 4 3 2 6 6 N 1.34782 * 119.99769 * 184.65298 * 4 3 2 7 7 C 1.46498 * 119.99627 * 174.89924 * 6 4 3 8 8 H 1.08998 * 112.85154 * 336.19931 * 7 6 4 9 9 C 1.53950 * 113.53544 * 107.50805 * 7 6 4 10 10 C 1.53779 * 87.01948 * 89.18741 * 9 7 6 11 11 H 1.09000 * 113.61412 * 270.76788 * 10 9 7 12 12 S 1.81402 * 113.61649 * 139.95440 * 10 9 7 13 13 O 1.42104 * 110.53965 * 329.23968 * 12 10 9 14 14 O 1.42100 * 110.54351 * 192.48830 * 12 10 9 15 15 C 1.76197 * 104.45116 * 80.85947 * 12 10 9 16 16 C 1.38236 * 119.99682 * 90.00217 * 15 12 10 17 17 C 1.38242 * 119.99736 * 179.97438 * 16 15 12 18 18 C 1.38234 * 119.99919 * 0.02872 * 17 16 15 19 19 C 1.38231 * 119.99987 * 359.96651 * 18 17 16 20 20 C 1.38228 * 120.00260 * 0.05742 * 19 18 17 21 21 C 1.53772 * 87.17305 * 25.36036 * 10 9 7 22 22 C 1.37876 * 107.53193 * 179.70392 * 3 2 1 23 23 C 1.39827 * 107.08405 * 0.25876 * 22 3 2 24 24 C 1.35449 * 107.86930 * 0.02562 * 23 22 3 25 25 C 1.50701 * 125.56811 * 180.02562 * 24 23 22 26 26 O 1.42894 * 109.47319 * 149.97962 * 25 24 23 27 27 Si 1.86295 * 109.47030 * 29.97071 * 25 24 23 28 28 H 1.08994 * 109.47202 * 95.78580 * 1 2 3 29 29 H 1.08996 * 109.47038 * 215.78988 * 1 2 3 30 30 H 1.09008 * 109.46938 * 335.78622 * 1 2 3 31 31 H 0.96997 * 120.00205 * 354.90555 * 6 4 3 32 32 H 1.09002 * 113.67118 * 334.65944 * 9 7 6 33 33 H 1.09001 * 113.61813 * 203.70947 * 9 7 6 34 34 H 1.08001 * 120.00349 * 0.02562 * 16 15 12 35 35 H 1.08002 * 119.99712 * 180.02562 * 17 16 15 36 36 H 1.08006 * 119.99587 * 179.70061 * 18 17 16 37 37 H 1.08001 * 119.99460 * 180.02562 * 19 18 17 38 38 H 1.08002 * 119.99880 * 179.97438 * 20 19 18 39 39 H 1.09007 * 113.61328 * 89.16102 * 21 10 9 40 40 H 1.09001 * 113.61763 * 220.05908 * 21 10 9 41 41 H 1.07997 * 126.45166 * 180.29851 * 22 3 2 42 42 H 1.08002 * 126.06848 * 180.02562 * 23 22 3 43 43 H 1.09004 * 109.46552 * 269.97151 * 25 24 23 44 44 H 0.96703 * 113.99707 * 299.99461 * 26 25 24 45 45 H 1.48499 * 109.99745 * 180.02562 * 27 25 24 46 46 H 1.48497 * 110.00362 * 301.32622 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1182 0.0000 4 6 1.8123 2.5125 -0.0009 5 8 0.6249 2.7648 0.0839 6 7 2.7091 3.5142 -0.0955 7 6 2.2493 4.9006 -0.2090 8 1 1.2398 4.9800 -0.6123 9 6 2.4731 5.7291 1.0691 10 6 3.8560 6.0862 0.4990 11 1 4.6384 5.3798 0.7765 12 16 4.3342 7.8133 0.7807 13 8 3.1863 8.6504 0.8080 14 8 5.4688 8.1511 -0.0053 15 6 4.9306 7.8396 2.4385 16 6 6.2690 7.6083 2.6952 17 6 6.7370 7.6294 3.9958 18 6 5.8664 7.8813 5.0396 19 6 4.5280 8.1127 4.7828 20 6 4.0600 8.0911 3.4824 21 6 3.2623 5.8312 -0.8964 22 6 3.5780 0.6888 0.0068 23 6 3.5521 -0.7093 0.0049 24 6 2.2555 -1.1009 -0.0035 25 6 1.7709 -2.5279 -0.0077 26 8 0.5090 -2.6044 0.6585 27 14 3.0064 -3.6059 0.8765 28 1 -0.3633 -0.1036 -1.0224 29 1 -0.3633 -0.8336 0.6010 30 1 -0.3633 0.9373 0.4215 31 1 3.6588 3.3173 -0.0885 32 1 2.5173 5.1287 1.9778 33 1 1.8033 6.5844 1.1580 34 1 6.9493 7.4118 1.8797 35 1 7.7828 7.4491 4.1964 36 1 6.2312 7.8931 6.0561 37 1 3.8480 8.3099 5.5983 38 1 3.0142 8.2715 3.2818 39 1 2.8086 6.7145 -1.3460 40 1 3.9425 5.3130 -1.5723 41 1 4.4582 1.3144 0.0131 42 1 4.4132 -1.3612 0.0092 43 1 1.6599 -2.8708 -1.0364 44 1 0.5328 -2.3139 1.5805 45 1 2.5404 -5.0159 0.8787 46 1 4.3311 -3.5103 0.2122 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12550010_10803936.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:53:25 Heat of formation + Delta-G solvation = -14.163237 kcal Electronic energy + Delta-G solvation = -31813.495490 eV Core-core repulsion = 27378.608666 eV Total energy + Delta-G solvation = -4434.886824 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.118 amu Computer time = 4.01 seconds Orbital eigenvalues (eV) -42.67317 -41.14020 -40.14624 -39.19781 -38.11208 -37.89999 -36.95950 -34.82254 -33.63338 -32.40683 -32.10351 -31.41348 -27.84487 -27.42540 -27.22744 -26.19738 -24.26013 -23.81594 -23.41472 -21.78891 -21.15017 -20.56962 -19.93361 -19.20190 -18.86447 -18.33023 -17.91031 -17.19015 -17.07846 -16.95285 -16.92466 -16.41448 -16.07329 -15.90385 -15.67184 -15.56758 -15.38684 -15.09655 -14.95257 -14.61374 -14.55712 -14.49104 -14.28500 -14.11310 -13.93755 -13.88014 -13.73820 -13.30674 -13.19529 -13.09798 -13.05680 -12.99805 -12.34575 -12.32208 -12.24202 -12.17138 -12.06831 -11.81674 -11.30109 -11.13909 -10.73609 -10.45798 -10.32660 -10.12745 -9.80002 -9.16297 -5.09875 -1.02718 -0.23994 0.21189 0.32619 1.04380 1.39622 1.60265 1.63360 1.74963 1.90822 2.23659 2.27536 2.34951 2.62009 2.79524 2.96467 3.10040 3.31536 3.36551 3.46633 3.56607 3.63387 3.76471 3.81998 3.91996 3.94912 4.21195 4.23653 4.24285 4.24565 4.30258 4.32532 4.38612 4.40633 4.46231 4.48547 4.59482 4.62456 4.69397 4.81737 4.83351 4.92675 4.98386 5.07297 5.15078 5.28594 5.28730 5.62264 5.74082 5.91271 6.07668 6.25065 6.33283 7.04985 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.049 3.951 2 N -0.388 5.388 3 C -0.054 4.054 4 C 0.596 3.404 5 O -0.540 6.540 6 N -0.704 5.704 7 C 0.139 3.861 8 H 0.118 0.882 9 C -0.124 4.124 10 C -0.603 4.603 11 H 0.155 0.845 12 S 2.500 3.500 13 O -0.930 6.930 14 O -0.934 6.934 15 C -0.658 4.658 16 C -0.026 4.026 17 C -0.140 4.140 18 C -0.065 4.065 19 C -0.140 4.140 20 C -0.023 4.023 21 C -0.118 4.118 22 C -0.134 4.134 23 C -0.204 4.204 24 C 0.017 3.983 25 C -0.050 4.050 26 O -0.541 6.541 27 Si 0.724 3.276 28 H 0.072 0.928 29 H 0.104 0.896 30 H 0.105 0.895 31 H 0.405 0.595 32 H 0.093 0.907 33 H 0.116 0.884 34 H 0.141 0.859 35 H 0.134 0.866 36 H 0.132 0.868 37 H 0.134 0.866 38 H 0.142 0.858 39 H 0.111 0.889 40 H 0.100 0.900 41 H 0.146 0.854 42 H 0.147 0.853 43 H 0.120 0.880 44 H 0.381 0.619 45 H -0.253 1.253 46 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.610 -3.650 4.514 6.365 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 N -0.061 5.061 3 C -0.169 4.169 4 C 0.385 3.615 5 O -0.418 6.418 6 N -0.355 5.355 7 C 0.032 3.968 8 H 0.136 0.864 9 C -0.163 4.163 10 C -0.713 4.713 11 H 0.173 0.827 12 S 2.680 3.320 13 O -0.927 6.927 14 O -0.931 6.931 15 C -0.745 4.745 16 C -0.045 4.045 17 C -0.159 4.159 18 C -0.083 4.083 19 C -0.159 4.159 20 C -0.042 4.042 21 C -0.157 4.157 22 C -0.160 4.160 23 C -0.228 4.228 24 C -0.101 4.101 25 C -0.160 4.160 26 O -0.347 6.347 27 Si 0.623 3.377 28 H 0.091 0.909 29 H 0.122 0.878 30 H 0.123 0.877 31 H 0.241 0.759 32 H 0.112 0.888 33 H 0.135 0.865 34 H 0.159 0.841 35 H 0.152 0.848 36 H 0.150 0.850 37 H 0.152 0.848 38 H 0.159 0.841 39 H 0.129 0.871 40 H 0.119 0.881 41 H 0.163 0.837 42 H 0.165 0.835 43 H 0.137 0.863 44 H 0.229 0.771 45 H -0.177 1.177 46 H -0.176 1.176 Dipole moment (debyes) X Y Z Total from point charges 1.656 -3.634 3.355 5.216 hybrid contribution 0.636 -0.254 0.158 0.703 sum 2.292 -3.887 3.513 5.719 Atomic orbital electron populations 1.22672 0.75382 1.06573 1.04463 1.43772 1.07065 1.03904 1.51314 1.19945 0.90545 0.87365 1.19001 1.16956 0.85457 0.83467 0.75650 1.90802 1.16217 1.84684 1.50124 1.45243 1.09882 1.05077 1.75286 1.21683 0.99493 0.79835 0.95762 0.86403 1.23283 0.91342 1.01945 0.99776 1.31784 1.08133 1.24342 1.07028 0.82667 1.05405 0.74837 0.77287 0.74425 1.93591 1.51135 1.61914 1.86054 1.93586 1.50206 1.81551 1.67759 1.30512 1.03164 1.17816 1.23025 1.20996 0.93253 0.92230 0.98015 1.21363 1.00536 1.01321 0.92663 1.21574 0.93571 0.93377 0.99754 1.21368 0.96223 1.01249 0.97030 1.20989 0.99454 0.91700 0.92011 1.23089 0.98474 1.01486 0.92664 1.21273 0.94323 0.95214 1.05218 1.20647 0.95106 0.95412 1.11664 1.21099 0.90937 0.89251 1.08863 1.24997 0.93845 0.94566 1.02611 1.86496 1.29983 1.88851 1.29387 0.94026 0.76365 0.77724 0.89594 0.90895 0.87785 0.87673 0.75933 0.88796 0.86535 0.84111 0.84831 0.85032 0.84822 0.84063 0.87085 0.88148 0.83677 0.83497 0.86289 0.77090 1.17721 1.17589 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 49. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.02 10.30 59.85 0.62 0.64 16 2 N -0.39 -0.44 3.16 -115.62 -0.37 -0.80 16 3 C -0.05 -0.06 6.89 -81.98 -0.56 -0.63 16 4 C 0.60 0.86 7.77 -12.85 -0.10 0.76 16 5 O -0.54 -2.38 14.18 5.20 0.07 -2.30 16 6 N -0.70 1.21 5.25 -54.24 -0.28 0.93 16 7 C 0.14 -0.27 4.30 -67.03 -0.29 -0.56 16 8 H 0.12 -0.09 7.53 -51.93 -0.39 -0.48 16 9 C -0.12 0.33 7.45 -25.83 -0.19 0.14 16 10 C -0.60 1.95 4.19 -25.92 -0.11 1.84 16 11 H 0.16 -0.88 8.14 -51.93 -0.42 -1.30 16 12 S 2.50 0.60 5.11 -107.50 -0.55 0.05 16 13 O -0.93 -2.75 16.35 -57.54 -0.94 -3.69 16 14 O -0.93 -3.19 17.13 -57.54 -0.99 -4.18 16 15 C -0.66 -0.22 5.66 -39.58 -0.22 -0.44 16 16 C -0.03 0.00 9.47 -39.58 -0.37 -0.37 16 17 C -0.14 0.12 10.05 -39.58 -0.40 -0.28 16 18 C -0.06 0.07 10.05 -39.59 -0.40 -0.33 16 19 C -0.14 0.10 10.05 -39.59 -0.40 -0.29 16 20 C -0.02 0.00 9.47 -39.59 -0.37 -0.38 16 21 C -0.12 0.38 7.42 -25.93 -0.19 0.19 16 22 C -0.13 0.08 10.36 -39.12 -0.41 -0.33 16 23 C -0.20 0.06 9.37 -39.98 -0.37 -0.31 16 24 C 0.02 0.00 6.15 -81.95 -0.50 -0.50 16 25 C -0.05 0.06 2.99 36.01 0.11 0.17 16 26 O -0.54 0.78 10.11 -35.23 -0.36 0.43 16 27 Si 0.72 -1.77 31.29 -169.99 -5.32 -7.08 16 28 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 29 H 0.10 -0.13 5.24 -51.93 -0.27 -0.41 16 30 H 0.10 0.17 5.93 -51.92 -0.31 -0.14 16 31 H 0.41 -1.69 7.60 -40.82 -0.31 -2.00 16 32 H 0.09 -0.27 8.14 -51.93 -0.42 -0.70 16 33 H 0.12 -0.33 7.46 -51.93 -0.39 -0.72 16 34 H 0.14 -0.20 7.57 -52.49 -0.40 -0.59 16 35 H 0.13 -0.39 8.06 -52.49 -0.42 -0.81 16 36 H 0.13 -0.43 8.06 -52.48 -0.42 -0.86 16 37 H 0.13 -0.37 8.06 -52.49 -0.42 -0.79 16 38 H 0.14 -0.19 7.57 -52.49 -0.40 -0.58 16 39 H 0.11 -0.42 8.10 -51.92 -0.42 -0.84 16 40 H 0.10 -0.44 8.14 -51.93 -0.42 -0.87 16 41 H 0.15 -0.50 7.45 -52.49 -0.39 -0.89 16 42 H 0.15 -0.23 6.62 -52.49 -0.35 -0.58 16 43 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 44 H 0.38 -1.86 8.29 45.56 0.38 -1.48 16 45 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 46 H -0.25 0.12 6.76 56.52 0.38 0.50 16 LS Contribution 392.42 15.07 5.91 5.91 Total: 0.00 -12.76 392.42 -12.82 -25.58 By element: Atomic # 1 Polarization: -8.34 SS G_CDS: -5.83 Total: -14.17 kcal Atomic # 6 Polarization: 3.50 SS G_CDS: -4.17 Total: -0.67 kcal Atomic # 7 Polarization: 0.78 SS G_CDS: -0.65 Total: 0.13 kcal Atomic # 8 Polarization: -7.53 SS G_CDS: -2.21 Total: -9.74 kcal Atomic # 14 Polarization: -1.77 SS G_CDS: -5.32 Total: -7.08 kcal Atomic # 16 Polarization: 0.60 SS G_CDS: -0.55 Total: 0.05 kcal Total LS contribution 5.91 Total: 5.91 kcal Total: -12.76 -12.82 -25.58 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12550010_10803936.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.415 kcal (2) G-P(sol) polarization free energy of solvation -12.759 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.344 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.819 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.578 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.163 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 4.01 seconds