Wall clock time and date at job start Sat Mar 6 2021 17:53:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.35455 * 125.56257 * 2 1 4 4 C 1.50705 * 126.06679 * 359.76468 * 3 2 1 5 5 O 1.42893 * 109.47110 * 245.15944 * 4 3 2 6 6 Si 1.86305 * 109.46913 * 125.16432 * 4 3 2 7 7 C 1.39833 * 107.86693 * 179.73277 * 3 2 1 8 8 C 1.50698 * 126.46128 * 179.97438 * 7 3 2 9 9 C 1.37868 * 107.08301 * 359.97438 * 7 3 2 10 10 C 1.46678 * 126.23205 * 179.97438 * 9 7 3 11 11 O 1.21693 * 120.00196 * 0.02562 * 10 9 7 12 12 N 1.34786 * 120.00014 * 180.02562 * 10 9 7 13 13 C 1.46498 * 119.99831 * 180.02562 * 12 10 9 14 14 H 1.08998 * 112.85444 * 334.67414 * 13 12 10 15 15 C 1.53787 * 113.61032 * 105.86804 * 13 12 10 16 16 C 1.54051 * 86.98507 * 89.16230 * 15 13 12 17 17 H 1.09004 * 113.60673 * 270.88187 * 16 15 13 18 18 S 1.81399 * 113.69565 * 139.99074 * 16 15 13 19 19 O 1.42101 * 110.54183 * 194.08689 * 18 16 15 20 20 O 1.42093 * 110.54323 * 330.83893 * 18 16 15 21 21 C 1.76200 * 104.45064 * 82.46548 * 18 16 15 22 22 C 1.38245 * 119.99690 * 269.72547 * 21 18 16 23 23 C 1.38236 * 119.99749 * 179.80939 * 22 21 18 24 24 C 1.38239 * 120.00018 * 0.42050 * 23 22 21 25 25 C 1.38230 * 119.99843 * 359.80873 * 24 23 22 26 26 C 1.38232 * 120.00431 * 0.02562 * 25 24 23 27 27 C 1.53778 * 87.08060 * 25.42964 * 16 15 13 28 28 N 1.35535 * 125.56632 * 179.68738 * 2 1 3 29 29 H 1.09002 * 109.46892 * 84.73229 * 1 2 3 30 30 H 1.08997 * 109.47076 * 204.73524 * 1 2 3 31 31 H 1.09005 * 109.47330 * 324.72881 * 1 2 3 32 32 H 1.09003 * 109.47109 * 5.16822 * 4 3 2 33 33 H 0.96692 * 114.00853 * 300.00427 * 5 4 3 34 34 H 1.48499 * 110.00019 * 58.67940 * 6 4 3 35 35 H 1.48498 * 109.99736 * 180.02562 * 6 4 3 36 36 H 1.09005 * 109.46663 * 89.99564 * 8 7 3 37 37 H 1.08994 * 109.47409 * 209.99998 * 8 7 3 38 38 H 1.09003 * 109.47058 * 330.00616 * 8 7 3 39 39 H 0.97001 * 119.99669 * 0.02562 * 12 10 9 40 40 H 1.09005 * 113.61256 * 203.66075 * 15 13 12 41 41 H 1.08996 * 113.61392 * 334.56188 * 15 13 12 42 42 H 1.07996 * 119.99669 * 0.02562 * 22 21 18 43 43 H 1.07998 * 119.99615 * 180.20765 * 23 22 21 44 44 H 1.08001 * 119.99809 * 179.79174 * 24 23 22 45 45 H 1.08005 * 120.00067 * 179.97438 * 25 24 23 46 46 H 1.07993 * 120.00403 * 179.97438 * 26 25 24 47 47 H 1.08994 * 113.61289 * 220.02792 * 27 16 15 48 48 H 1.08994 * 113.68839 * 89.12959 * 27 16 15 49 49 H 0.96992 * 125.67362 * 0.24856 * 28 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1019 0.0000 4 6 1.8198 2.5321 -0.0050 5 8 2.2109 3.1596 -1.2278 6 14 2.5794 3.4437 1.4313 7 6 3.6269 0.6769 0.0062 8 6 4.8485 1.5593 0.0079 9 6 3.6122 -0.7017 0.0105 10 6 4.7860 -1.5813 0.0170 11 8 5.9049 -1.1028 0.0196 12 7 4.6254 -2.9195 0.0202 13 6 5.7977 -3.7979 0.0272 14 1 6.6826 -3.3264 -0.4003 15 6 6.0543 -4.4718 1.3856 16 6 5.1372 -5.6112 0.9019 17 1 4.0844 -5.4532 1.1358 18 16 5.7217 -7.2644 1.3664 19 8 5.0290 -8.2632 0.6303 20 8 7.1387 -7.2814 1.4702 21 6 5.1619 -7.4792 3.0233 22 6 5.9657 -7.0936 4.0798 23 6 5.5250 -7.2584 5.3796 24 6 4.2841 -7.8170 5.6231 25 6 3.4824 -8.2069 4.5667 26 6 3.9217 -8.0389 3.2668 27 6 5.5179 -5.2033 -0.5311 28 7 2.2953 -1.1025 0.0060 29 1 -0.3633 0.0944 -1.0234 30 1 -0.3633 -0.9334 0.4300 31 1 -0.3634 0.8390 0.5934 32 1 0.7337 2.5546 0.0839 33 1 3.1666 3.1759 -1.3735 34 1 4.0606 3.3930 1.3390 35 1 2.1184 4.8553 1.4380 36 1 5.1392 1.7753 1.0360 37 1 5.6661 1.0491 -0.5013 38 1 4.6237 2.4919 -0.5096 39 1 3.7335 -3.3009 0.0177 40 1 7.0902 -4.7777 1.5325 41 1 5.6522 -3.9151 2.2320 42 1 6.9365 -6.6603 3.8896 43 1 6.1516 -6.9541 6.2049 44 1 3.9412 -7.9489 6.6387 45 1 2.5131 -8.6437 4.7569 46 1 3.2955 -8.3440 2.4415 47 1 4.6830 -5.2367 -1.2309 48 1 6.4071 -5.7081 -0.9085 49 1 1.9834 -2.0209 0.0076 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12550010_12297754.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:53:39 Heat of formation + Delta-G solvation = -29.256711 kcal Electronic energy + Delta-G solvation = -34077.137154 eV Core-core repulsion = 29486.058209 eV Total energy + Delta-G solvation = -4591.078945 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.133 amu Computer time = 4.69 seconds Orbital eigenvalues (eV) -42.77728 -41.18392 -40.19324 -39.22834 -38.16488 -37.85516 -37.01196 -34.77187 -33.81610 -32.89196 -32.45139 -32.15075 -29.39289 -28.17166 -27.28975 -26.92737 -26.04842 -24.29822 -23.86172 -22.88085 -21.31488 -21.05547 -20.23912 -19.98170 -19.62111 -19.05674 -18.13994 -17.75367 -17.32271 -17.10891 -16.97009 -16.76589 -16.49874 -16.13881 -15.80917 -15.73246 -15.58353 -15.44662 -15.16270 -14.78314 -14.66049 -14.48727 -14.37989 -14.21240 -14.13138 -13.98914 -13.90980 -13.79730 -13.67512 -13.35495 -13.34298 -13.27141 -13.14382 -13.04940 -12.76118 -12.39366 -12.37918 -12.35523 -12.22720 -11.86935 -11.53503 -11.35965 -10.98194 -10.72655 -10.50846 -10.39328 -10.17529 -9.59534 -9.06390 -4.85129 -1.08209 -0.28870 0.16446 0.30385 1.25545 1.54029 1.67998 1.73613 1.78354 1.90144 2.11976 2.24195 2.29966 2.54582 2.73444 2.90570 3.26117 3.30452 3.48926 3.51750 3.65181 3.65855 3.71583 3.77412 3.87698 3.90242 3.97857 4.14648 4.18122 4.19160 4.26493 4.26909 4.32931 4.35413 4.41991 4.44942 4.49941 4.54803 4.57157 4.65411 4.76515 4.78662 4.83129 4.93587 4.94034 5.07450 5.10549 5.19275 5.24102 5.30219 5.61473 5.69413 5.81995 6.15901 6.31417 6.51943 7.00555 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.087 3.913 3 C -0.205 4.205 4 C -0.034 4.034 5 O -0.531 6.531 6 Si 0.669 3.331 7 C -0.057 4.057 8 C -0.098 4.098 9 C -0.062 4.062 10 C 0.596 3.404 11 O -0.517 6.517 12 N -0.718 5.718 13 C 0.137 3.863 14 H 0.120 0.880 15 C -0.123 4.123 16 C -0.604 4.604 17 H 0.153 0.847 18 S 2.500 3.500 19 O -0.934 6.934 20 O -0.928 6.928 21 C -0.659 4.659 22 C -0.022 4.022 23 C -0.140 4.140 24 C -0.064 4.064 25 C -0.140 4.140 26 C -0.027 4.027 27 C -0.117 4.117 28 N -0.537 5.537 29 H 0.081 0.919 30 H 0.070 0.930 31 H 0.089 0.911 32 H 0.111 0.889 33 H 0.372 0.628 34 H -0.241 1.241 35 H -0.260 1.260 36 H 0.076 0.924 37 H 0.086 0.914 38 H 0.055 0.945 39 H 0.395 0.605 40 H 0.118 0.882 41 H 0.093 0.907 42 H 0.142 0.858 43 H 0.134 0.866 44 H 0.132 0.868 45 H 0.134 0.866 46 H 0.141 0.859 47 H 0.098 0.902 48 H 0.111 0.889 49 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.956 -0.693 4.001 7.208 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.032 4.032 3 C -0.212 4.212 4 C -0.145 4.145 5 O -0.338 6.338 6 Si 0.569 3.431 7 C -0.065 4.065 8 C -0.155 4.155 9 C -0.173 4.173 10 C 0.384 3.616 11 O -0.392 6.392 12 N -0.369 5.369 13 C 0.031 3.969 14 H 0.138 0.862 15 C -0.163 4.163 16 C -0.714 4.714 17 H 0.171 0.829 18 S 2.681 3.319 19 O -0.931 6.931 20 O -0.926 6.926 21 C -0.746 4.746 22 C -0.041 4.041 23 C -0.158 4.158 24 C -0.082 4.082 25 C -0.159 4.159 26 C -0.046 4.046 27 C -0.157 4.157 28 N -0.134 5.134 29 H 0.100 0.900 30 H 0.088 0.912 31 H 0.108 0.892 32 H 0.129 0.871 33 H 0.221 0.779 34 H -0.165 1.165 35 H -0.185 1.185 36 H 0.095 0.905 37 H 0.105 0.895 38 H 0.074 0.926 39 H 0.229 0.771 40 H 0.136 0.864 41 H 0.111 0.889 42 H 0.160 0.840 43 H 0.152 0.848 44 H 0.150 0.850 45 H 0.152 0.848 46 H 0.158 0.842 47 H 0.116 0.884 48 H 0.130 0.870 49 H 0.252 0.748 Dipole moment (debyes) X Y Z Total from point charges -4.776 -0.380 3.720 6.066 hybrid contribution -0.760 -0.530 -0.254 0.961 sum -5.537 -0.910 3.466 6.595 Atomic orbital electron populations 1.20517 0.87148 1.03870 1.03825 1.20307 0.93634 0.85335 1.03882 1.19439 0.92342 0.95150 1.14246 1.24231 1.04255 0.90997 0.95021 1.86599 1.28341 1.80176 1.38700 0.95155 0.82112 0.80586 0.85232 1.19720 0.94613 0.91189 1.01002 1.20627 0.94932 0.97068 1.02872 1.19901 0.82733 0.93780 1.20901 1.16995 0.87664 0.80968 0.75937 1.90855 1.24107 1.74784 1.49463 1.45514 1.08994 1.05652 1.76731 1.21659 0.90047 0.89293 0.95939 0.86216 1.23307 0.99764 0.93669 0.99531 1.31838 1.11500 1.20559 1.07480 0.82939 1.05385 0.75240 0.76770 0.74496 1.93587 1.75294 1.53807 1.70408 1.93593 1.26930 1.86249 1.85799 1.30515 1.05569 1.15682 1.22821 1.21002 0.97971 0.93116 0.92035 1.21381 0.96823 1.00528 0.97102 1.21581 0.93605 0.93324 0.99735 1.21358 1.00765 1.01199 0.92587 1.20983 0.93089 0.92224 0.98265 1.23070 1.04028 0.96373 0.92188 1.41817 1.05335 1.08365 1.57928 0.89990 0.91151 0.89201 0.87108 0.77889 1.16462 1.18453 0.90519 0.89485 0.92646 0.77117 0.86403 0.88858 0.84017 0.84770 0.84997 0.84837 0.84168 0.88374 0.87039 0.74751 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 49. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.39 9.97 36.01 0.36 0.75 16 2 C 0.09 -0.13 7.13 -81.95 -0.58 -0.72 16 3 C -0.21 -0.05 4.66 -105.02 -0.49 -0.54 16 4 C -0.03 0.00 2.86 36.01 0.10 0.10 16 5 O -0.53 -1.08 12.88 -35.23 -0.45 -1.53 16 6 Si 0.67 -0.23 30.98 -169.99 -5.27 -5.50 16 7 C -0.06 -0.08 5.82 -104.16 -0.61 -0.69 16 8 C -0.10 -0.16 7.72 36.00 0.28 0.12 16 9 C -0.06 -0.03 7.06 -81.98 -0.58 -0.60 16 10 C 0.60 0.58 7.79 -12.85 -0.10 0.48 16 11 O -0.52 -2.25 14.42 5.19 0.07 -2.18 16 12 N -0.72 1.73 5.26 -54.32 -0.29 1.45 16 13 C 0.14 -0.31 4.30 -67.11 -0.29 -0.60 16 14 H 0.12 -0.12 7.50 -51.93 -0.39 -0.51 16 15 C -0.12 0.36 7.46 -25.77 -0.19 0.17 16 16 C -0.60 2.19 4.21 -25.78 -0.11 2.08 16 17 H 0.15 -0.94 8.14 -51.93 -0.42 -1.37 16 18 S 2.50 -0.16 5.13 -107.50 -0.55 -0.71 16 19 O -0.93 -2.90 17.13 -57.54 -0.99 -3.88 16 20 O -0.93 -2.52 16.31 -57.54 -0.94 -3.46 16 21 C -0.66 -0.03 5.66 -39.58 -0.22 -0.25 16 22 C -0.02 0.00 9.47 -39.58 -0.37 -0.37 16 23 C -0.14 0.13 10.05 -39.58 -0.40 -0.26 16 24 C -0.06 0.09 10.05 -39.58 -0.40 -0.31 16 25 C -0.14 0.16 10.05 -39.59 -0.40 -0.24 16 26 C -0.03 0.01 9.47 -39.59 -0.37 -0.37 16 27 C -0.12 0.42 7.41 -25.92 -0.19 0.23 16 28 N -0.54 1.30 5.99 -5.70 -0.03 1.27 16 29 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 30 H 0.07 -0.39 8.14 -51.93 -0.42 -0.81 16 31 H 0.09 -0.43 7.27 -51.93 -0.38 -0.81 16 32 H 0.11 -0.15 6.66 -51.93 -0.35 -0.49 16 33 H 0.37 0.01 6.58 45.56 0.30 0.30 16 34 H -0.24 -0.29 5.05 56.52 0.29 -0.01 16 35 H -0.26 -0.73 7.11 56.52 0.40 -0.33 16 36 H 0.08 0.13 7.16 -51.93 -0.37 -0.24 16 37 H 0.09 0.25 6.48 -51.93 -0.34 -0.08 16 38 H 0.05 0.02 5.08 -51.93 -0.26 -0.24 16 39 H 0.40 -2.08 7.83 -40.82 -0.32 -2.40 16 40 H 0.12 -0.35 7.44 -51.93 -0.39 -0.74 16 41 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 42 H 0.14 -0.21 7.56 -52.49 -0.40 -0.61 16 43 H 0.13 -0.40 8.06 -52.49 -0.42 -0.82 16 44 H 0.13 -0.47 8.06 -52.49 -0.42 -0.89 16 45 H 0.13 -0.43 8.06 -52.48 -0.42 -0.85 16 46 H 0.14 -0.24 7.57 -52.49 -0.40 -0.64 16 47 H 0.10 -0.48 8.14 -51.93 -0.42 -0.90 16 48 H 0.11 -0.45 8.10 -51.93 -0.42 -0.87 16 49 H 0.41 -2.36 8.19 -40.82 -0.33 -2.70 16 LS Contribution 409.67 15.07 6.17 6.17 Total: 0.00 -13.26 409.67 -13.57 -26.83 By element: Atomic # 1 Polarization: -10.72 SS G_CDS: -6.74 Total: -17.46 kcal Atomic # 6 Polarization: 3.56 SS G_CDS: -4.57 Total: -1.01 kcal Atomic # 7 Polarization: 3.04 SS G_CDS: -0.32 Total: 2.72 kcal Atomic # 8 Polarization: -8.74 SS G_CDS: -2.30 Total: -11.05 kcal Atomic # 14 Polarization: -0.23 SS G_CDS: -5.27 Total: -5.50 kcal Atomic # 16 Polarization: -0.16 SS G_CDS: -0.55 Total: -0.71 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -13.26 -13.57 -26.83 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12550010_12297754.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.427 kcal (2) G-P(sol) polarization free energy of solvation -13.260 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.688 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.569 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.829 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.257 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 4.69 seconds