Wall clock time and date at job start Sat Mar 6 2021 17:55:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86304 * 109.47131 * 2 1 4 4 C 1.50707 * 109.46879 * 240.00411 * 2 1 3 5 5 C 1.38632 * 119.93776 * 74.97609 * 4 2 1 6 6 F 1.35099 * 119.88396 * 359.97438 * 5 4 2 7 7 C 1.38681 * 120.23655 * 180.02562 * 5 4 2 8 8 C 1.37810 * 120.11969 * 359.67424 * 7 5 4 9 9 C 1.39668 * 119.87833 * 0.62154 * 8 7 5 10 10 C 1.47732 * 120.12302 * 179.67441 * 9 8 7 11 11 O 1.21564 * 120.00310 * 179.72453 * 10 9 8 12 12 N 1.34780 * 119.99443 * 359.73004 * 10 9 8 13 13 C 1.46497 * 119.99653 * 180.02562 * 12 10 9 14 14 H 1.09002 * 112.84935 * 334.66222 * 13 12 10 15 15 C 1.53786 * 113.61643 * 105.85894 * 13 12 10 16 16 C 1.53962 * 87.01719 * 89.22773 * 15 13 12 17 17 H 1.08997 * 113.53543 * 270.80998 * 16 15 13 18 18 S 1.81397 * 113.73937 * 139.94614 * 16 15 13 19 19 O 1.42111 * 110.54036 * 194.02534 * 18 16 15 20 20 O 1.42101 * 110.54574 * 330.77677 * 18 16 15 21 21 C 1.76199 * 104.45095 * 82.40255 * 18 16 15 22 22 C 1.38231 * 119.99788 * 269.72492 * 21 18 16 23 23 C 1.38246 * 119.99786 * 179.74364 * 22 21 18 24 24 C 1.38233 * 119.99518 * 0.55225 * 23 22 21 25 25 C 1.38235 * 120.00528 * 359.70156 * 24 23 22 26 26 C 1.38233 * 119.99509 * 0.02562 * 25 24 23 27 27 C 1.53781 * 113.61305 * 203.46742 * 13 12 10 28 28 C 1.37853 * 119.94252 * 254.99394 * 4 2 1 29 29 H 0.96696 * 114.00750 * 59.99956 * 1 2 3 30 30 H 1.08995 * 109.48057 * 120.00659 * 2 1 3 31 31 H 1.48496 * 110.00163 * 298.68903 * 3 2 1 32 32 H 1.48503 * 109.99698 * 60.00197 * 3 2 1 33 33 H 1.08002 * 119.94103 * 179.97438 * 7 5 4 34 34 H 1.07998 * 120.06589 * 180.31826 * 8 7 5 35 35 H 0.96995 * 120.00200 * 359.97438 * 12 10 9 36 36 H 1.08993 * 113.61491 * 203.74894 * 15 13 12 37 37 H 1.09000 * 113.61138 * 334.65232 * 15 13 12 38 38 H 1.07993 * 120.00655 * 359.97438 * 22 21 18 39 39 H 1.07995 * 120.00041 * 180.27102 * 23 22 21 40 40 H 1.08001 * 119.99369 * 179.72422 * 24 23 22 41 41 H 1.07996 * 120.00258 * 180.02562 * 25 24 23 42 42 H 1.08005 * 119.99310 * 179.97438 * 26 25 24 43 43 H 1.09001 * 113.61695 * 25.34675 * 27 13 12 44 44 H 1.08997 * 113.61223 * 156.25258 * 27 13 12 45 45 H 1.08006 * 120.05502 * 359.97438 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7104 -1.2306 5 6 1.8682 -0.0835 -2.4655 6 9 1.3560 1.1629 -2.5623 7 6 2.3282 -0.7316 -3.6020 8 6 2.8569 -2.0008 -3.5080 9 6 2.9170 -2.6394 -2.2674 10 6 3.4761 -4.0028 -2.1616 11 8 3.5320 -4.5546 -1.0799 12 7 3.9242 -4.6347 -3.2645 13 6 4.4781 -5.9869 -3.1598 14 1 4.8793 -6.2044 -2.1699 15 6 3.5403 -7.0802 -3.6983 16 6 4.2027 -6.8598 -5.0706 17 1 3.7142 -6.0930 -5.6716 18 16 4.5010 -8.3934 -5.9923 19 8 5.3876 -8.1584 -7.0777 20 8 4.7074 -9.4796 -5.0996 21 6 2.9569 -8.7511 -6.7620 22 6 2.0244 -9.5354 -6.1092 23 6 0.8109 -9.8117 -6.7109 24 6 0.5345 -9.3130 -7.9702 25 6 1.4691 -8.5331 -8.6253 26 6 2.6803 -8.2522 -8.0212 27 6 5.4362 -6.3506 -4.3063 28 6 2.4522 -1.9824 -1.1263 29 1 -0.3934 0.4417 -0.7650 30 1 1.7924 -0.5139 0.8898 31 1 1.5877 2.4587 -1.2241 32 1 1.5614 2.4679 1.2086 33 1 2.2764 -0.2389 -4.5617 34 1 3.2195 -2.5027 -4.3929 35 1 3.8794 -4.1945 -4.1277 36 1 3.7308 -8.0663 -3.2749 37 1 2.4864 -6.8034 -3.6718 38 1 2.2424 -9.9292 -5.1275 39 1 0.0806 -10.4207 -6.1990 40 1 -0.4118 -9.5326 -8.4421 41 1 1.2530 -8.1432 -9.6090 42 1 3.4107 -7.6432 -8.5332 43 1 5.9107 -5.4856 -4.7699 44 1 6.1460 -7.1369 -4.0494 45 1 2.5009 -2.4698 -0.1637 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12550010_12496548.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:55:33 Heat of formation + Delta-G solvation = -73.573046 kcal Electronic energy + Delta-G solvation = -33253.015940 eV Core-core repulsion = 28438.836327 eV Total energy + Delta-G solvation = -4814.179613 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.097 amu Computer time = 3.41 seconds Orbital eigenvalues (eV) -50.55187 -41.78828 -40.47348 -40.17776 -39.15313 -38.14998 -37.81828 -36.99499 -34.78577 -32.95754 -32.43940 -32.13542 -32.01458 -27.48586 -27.27385 -26.98817 -25.00160 -24.24001 -23.84646 -23.68446 -21.86310 -21.26036 -19.99334 -19.51449 -19.14883 -18.94096 -18.21307 -18.03502 -17.83655 -17.27374 -17.11896 -17.06271 -16.94174 -16.36811 -16.17104 -16.02753 -15.68544 -15.66911 -15.61021 -15.19367 -15.07443 -14.81456 -14.64563 -14.43351 -14.16962 -14.14625 -14.05801 -13.90573 -13.75638 -13.46710 -13.33679 -13.13454 -13.04780 -13.02927 -12.44063 -12.37838 -12.36032 -12.21326 -11.85586 -11.35856 -11.33284 -11.22296 -10.91529 -10.49641 -10.40783 -10.28035 -10.15999 -9.97272 -4.99102 -1.06616 -0.66426 -0.27338 -0.15827 0.17918 1.15855 1.45037 1.59155 1.68811 1.76675 1.96748 2.31006 2.40724 2.56312 2.74726 2.81942 2.92056 3.12328 3.26725 3.28975 3.33230 3.38909 3.40838 3.52038 3.70064 3.73659 3.78878 3.89118 3.94802 4.14224 4.18905 4.20098 4.20602 4.28418 4.36115 4.43191 4.44936 4.56308 4.57739 4.60085 4.64019 4.69774 4.80138 4.83277 4.92549 4.95061 5.12001 5.20079 5.25582 5.41678 5.70896 6.17706 6.22910 6.93925 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.523 6.523 2 C -0.074 4.074 3 Si 0.675 3.325 4 C -0.151 4.151 5 C 0.121 3.879 6 F -0.122 7.122 7 C -0.152 4.152 8 C -0.055 4.055 9 C -0.145 4.145 10 C 0.566 3.434 11 O -0.523 6.523 12 N -0.710 5.710 13 C 0.135 3.865 14 H 0.120 0.880 15 C -0.124 4.124 16 C -0.605 4.605 17 H 0.154 0.846 18 S 2.500 3.500 19 O -0.933 6.933 20 O -0.929 6.929 21 C -0.659 4.659 22 C -0.023 4.023 23 C -0.140 4.140 24 C -0.065 4.065 25 C -0.140 4.140 26 C -0.026 4.026 27 C -0.117 4.117 28 C -0.008 4.008 29 H 0.375 0.625 30 H 0.125 0.875 31 H -0.231 1.231 32 H -0.259 1.259 33 H 0.147 0.853 34 H 0.138 0.862 35 H 0.402 0.598 36 H 0.118 0.882 37 H 0.093 0.907 38 H 0.142 0.858 39 H 0.134 0.866 40 H 0.132 0.868 41 H 0.134 0.866 42 H 0.141 0.859 43 H 0.100 0.900 44 H 0.111 0.889 45 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.519 2.675 -3.545 4.472 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.329 6.329 2 C -0.183 4.183 3 Si 0.575 3.425 4 C -0.152 4.152 5 C 0.101 3.899 6 F -0.100 7.100 7 C -0.171 4.171 8 C -0.074 4.074 9 C -0.148 4.148 10 C 0.354 3.646 11 O -0.399 6.399 12 N -0.363 5.363 13 C 0.029 3.971 14 H 0.138 0.862 15 C -0.163 4.163 16 C -0.714 4.714 17 H 0.172 0.828 18 S 2.681 3.319 19 O -0.931 6.931 20 O -0.926 6.926 21 C -0.746 4.746 22 C -0.041 4.041 23 C -0.159 4.159 24 C -0.083 4.083 25 C -0.159 4.159 26 C -0.045 4.045 27 C -0.156 4.156 28 C -0.027 4.027 29 H 0.223 0.777 30 H 0.143 0.857 31 H -0.155 1.155 32 H -0.184 1.184 33 H 0.165 0.835 34 H 0.155 0.845 35 H 0.238 0.762 36 H 0.136 0.864 37 H 0.111 0.889 38 H 0.160 0.840 39 H 0.152 0.848 40 H 0.150 0.850 41 H 0.152 0.848 42 H 0.159 0.841 43 H 0.118 0.882 44 H 0.129 0.871 45 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 0.125 2.355 -2.298 3.293 hybrid contribution -2.169 0.530 -1.430 2.652 sum -2.044 2.885 -3.728 5.138 Atomic orbital electron populations 1.86660 1.17075 1.79899 1.49284 1.24998 0.84305 1.11485 0.97524 0.95441 0.91432 0.74628 0.81047 1.20285 1.04030 0.96396 0.94508 1.17921 0.97091 0.80488 0.94387 1.91583 1.84379 1.37670 1.96416 1.21101 1.01723 0.95987 0.98282 1.21166 0.95645 0.93854 0.96755 1.19945 1.05204 0.95141 0.94541 1.18106 0.77391 0.85144 0.83992 1.90838 1.54888 1.67095 1.27063 1.45532 1.63795 1.16418 1.10513 1.21688 0.93561 0.81407 1.00490 0.86219 1.23291 1.01228 1.01786 0.90041 1.31832 1.08139 1.21365 1.10094 0.82780 1.05403 0.74596 0.76765 0.75183 1.93590 1.61471 1.86174 1.51826 1.93594 1.84170 1.48478 1.66373 1.30514 1.23045 1.13347 1.07681 1.20998 0.91849 0.92088 0.99206 1.21380 0.97434 1.01040 0.96004 1.21579 0.99004 0.93428 0.94255 1.21360 0.94041 0.99723 1.00779 1.20989 0.96457 0.94912 0.92174 1.23072 0.93976 1.03296 0.95243 1.21051 0.91220 0.91283 0.99122 0.77697 0.85698 1.15461 1.18401 0.83512 0.84463 0.76236 0.86421 0.88852 0.84025 0.84798 0.85027 0.84836 0.84121 0.88171 0.87051 0.83084 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 39. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.68 12.88 -35.23 -0.45 -1.13 16 2 C -0.07 0.04 2.81 36.01 0.10 0.14 16 3 Si 0.68 -0.50 30.81 -169.99 -5.24 -5.74 16 4 C -0.15 0.12 4.78 -104.61 -0.50 -0.38 16 5 C 0.12 -0.13 6.62 -39.27 -0.26 -0.39 16 6 F -0.12 -0.01 12.57 2.25 0.03 0.01 16 7 C -0.15 0.43 10.01 -39.57 -0.40 0.03 16 8 C -0.06 0.20 9.54 -39.20 -0.37 -0.18 16 9 C -0.15 0.20 5.87 -104.96 -0.62 -0.42 16 10 C 0.57 -0.10 7.77 -12.38 -0.10 -0.20 16 11 O -0.52 -1.89 15.96 5.31 0.08 -1.81 16 12 N -0.71 2.22 5.22 -53.99 -0.28 1.94 16 13 C 0.14 -0.38 4.30 -67.12 -0.29 -0.67 16 14 H 0.12 -0.19 7.50 -51.93 -0.39 -0.58 16 15 C -0.12 0.40 7.46 -25.82 -0.19 0.20 16 16 C -0.60 2.34 4.20 -25.82 -0.11 2.23 16 17 H 0.15 -0.99 8.14 -51.93 -0.42 -1.41 16 18 S 2.50 -0.44 5.13 -107.50 -0.55 -0.99 16 19 O -0.93 -2.77 17.13 -57.54 -0.99 -3.76 16 20 O -0.93 -2.43 16.32 -57.54 -0.94 -3.37 16 21 C -0.66 -0.02 5.66 -39.59 -0.22 -0.25 16 22 C -0.02 0.00 9.47 -39.58 -0.37 -0.37 16 23 C -0.14 0.12 10.05 -39.58 -0.40 -0.28 16 24 C -0.06 0.08 10.05 -39.58 -0.40 -0.32 16 25 C -0.14 0.14 10.05 -39.58 -0.40 -0.25 16 26 C -0.03 0.01 9.47 -39.58 -0.37 -0.37 16 27 C -0.12 0.47 7.41 -25.92 -0.19 0.28 16 28 C -0.01 0.00 9.21 -39.20 -0.36 -0.36 16 29 H 0.38 -0.45 8.40 45.56 0.38 -0.07 16 30 H 0.13 -0.19 7.77 -51.93 -0.40 -0.59 16 31 H -0.23 -0.25 5.27 56.52 0.30 0.05 16 32 H -0.26 -0.68 7.11 56.52 0.40 -0.28 16 33 H 0.15 -0.68 8.06 -52.49 -0.42 -1.10 16 34 H 0.14 -0.93 6.40 -52.49 -0.34 -1.27 16 35 H 0.40 -2.40 6.73 -40.82 -0.27 -2.67 16 36 H 0.12 -0.38 7.45 -51.93 -0.39 -0.76 16 37 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 38 H 0.14 -0.21 7.56 -52.49 -0.40 -0.61 16 39 H 0.13 -0.38 8.06 -52.49 -0.42 -0.80 16 40 H 0.13 -0.45 8.06 -52.49 -0.42 -0.87 16 41 H 0.13 -0.41 8.06 -52.49 -0.42 -0.84 16 42 H 0.14 -0.25 7.57 -52.48 -0.40 -0.64 16 43 H 0.10 -0.55 8.14 -51.93 -0.42 -0.97 16 44 H 0.11 -0.50 8.10 -51.93 -0.42 -0.92 16 45 H 0.15 -0.06 7.59 -52.48 -0.40 -0.46 16 LS Contribution 394.83 15.07 5.95 5.95 Total: 0.00 -12.84 394.83 -13.12 -25.96 By element: Atomic # 1 Polarization: -10.25 SS G_CDS: -5.28 Total: -15.53 kcal Atomic # 6 Polarization: 3.92 SS G_CDS: -5.45 Total: -1.54 kcal Atomic # 7 Polarization: 2.22 SS G_CDS: -0.28 Total: 1.94 kcal Atomic # 8 Polarization: -7.77 SS G_CDS: -2.29 Total: -10.07 kcal Atomic # 9 Polarization: -0.01 SS G_CDS: 0.03 Total: 0.01 kcal Atomic # 14 Polarization: -0.50 SS G_CDS: -5.24 Total: -5.74 kcal Atomic # 16 Polarization: -0.44 SS G_CDS: -0.55 Total: -0.99 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -12.84 -13.12 -25.96 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12550010_12496548.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.618 kcal (2) G-P(sol) polarization free energy of solvation -12.837 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.455 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.118 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.955 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.573 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.41 seconds