Wall clock time and date at job start Sat Mar 6 2021 17:55:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86304 * 109.47131 * 2 1 4 4 C 1.50707 * 109.46879 * 240.00411 * 2 1 3 5 5 C 1.38632 * 119.93776 * 74.97609 * 4 2 1 6 6 F 1.35099 * 119.88396 * 359.97438 * 5 4 2 7 7 C 1.38681 * 120.23655 * 180.02562 * 5 4 2 8 8 C 1.37810 * 120.11969 * 359.67424 * 7 5 4 9 9 C 1.39668 * 119.87833 * 0.62154 * 8 7 5 10 10 C 1.47732 * 120.12302 * 179.67441 * 9 8 7 11 11 O 1.21564 * 120.00310 * 179.72453 * 10 9 8 12 12 N 1.34780 * 119.99443 * 359.73004 * 10 9 8 13 13 C 1.46497 * 119.99653 * 180.02562 * 12 10 9 14 14 H 1.09002 * 112.84935 * 334.66222 * 13 12 10 15 15 C 1.53786 * 113.61643 * 105.85894 * 13 12 10 16 16 C 1.53962 * 87.01719 * 89.22773 * 15 13 12 17 17 H 1.08997 * 113.53543 * 270.80998 * 16 15 13 18 18 S 1.81397 * 113.73937 * 139.94614 * 16 15 13 19 19 O 1.42111 * 110.54036 * 194.02534 * 18 16 15 20 20 O 1.42101 * 110.54574 * 330.77677 * 18 16 15 21 21 C 1.76199 * 104.45095 * 82.40255 * 18 16 15 22 22 C 1.38231 * 119.99788 * 269.72492 * 21 18 16 23 23 C 1.38246 * 119.99786 * 179.74364 * 22 21 18 24 24 C 1.38233 * 119.99518 * 0.55225 * 23 22 21 25 25 C 1.38235 * 120.00528 * 359.70156 * 24 23 22 26 26 C 1.38233 * 119.99509 * 0.02562 * 25 24 23 27 27 C 1.53781 * 113.61305 * 203.46742 * 13 12 10 28 28 C 1.37853 * 119.94252 * 254.99394 * 4 2 1 29 29 H 0.96696 * 114.00750 * 59.99956 * 1 2 3 30 30 H 1.08995 * 109.48057 * 120.00659 * 2 1 3 31 31 H 1.48496 * 110.00163 * 298.68903 * 3 2 1 32 32 H 1.48503 * 109.99698 * 60.00197 * 3 2 1 33 33 H 1.08002 * 119.94103 * 179.97438 * 7 5 4 34 34 H 1.07998 * 120.06589 * 180.31826 * 8 7 5 35 35 H 0.96995 * 120.00200 * 359.97438 * 12 10 9 36 36 H 1.08993 * 113.61491 * 203.74894 * 15 13 12 37 37 H 1.09000 * 113.61138 * 334.65232 * 15 13 12 38 38 H 1.07993 * 120.00655 * 359.97438 * 22 21 18 39 39 H 1.07995 * 120.00041 * 180.27102 * 23 22 21 40 40 H 1.08001 * 119.99369 * 179.72422 * 24 23 22 41 41 H 1.07996 * 120.00258 * 180.02562 * 25 24 23 42 42 H 1.08005 * 119.99310 * 179.97438 * 26 25 24 43 43 H 1.09001 * 113.61695 * 25.34675 * 27 13 12 44 44 H 1.08997 * 113.61223 * 156.25258 * 27 13 12 45 45 H 1.08006 * 120.05502 * 359.97438 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7104 -1.2306 5 6 1.8682 -0.0835 -2.4655 6 9 1.3560 1.1629 -2.5623 7 6 2.3282 -0.7316 -3.6020 8 6 2.8569 -2.0008 -3.5080 9 6 2.9170 -2.6394 -2.2674 10 6 3.4761 -4.0028 -2.1616 11 8 3.5320 -4.5546 -1.0799 12 7 3.9242 -4.6347 -3.2645 13 6 4.4781 -5.9869 -3.1598 14 1 4.8793 -6.2044 -2.1699 15 6 3.5403 -7.0802 -3.6983 16 6 4.2027 -6.8598 -5.0706 17 1 3.7142 -6.0930 -5.6716 18 16 4.5010 -8.3934 -5.9923 19 8 5.3876 -8.1584 -7.0777 20 8 4.7074 -9.4796 -5.0996 21 6 2.9569 -8.7511 -6.7620 22 6 2.0244 -9.5354 -6.1092 23 6 0.8109 -9.8117 -6.7109 24 6 0.5345 -9.3130 -7.9702 25 6 1.4691 -8.5331 -8.6253 26 6 2.6803 -8.2522 -8.0212 27 6 5.4362 -6.3506 -4.3063 28 6 2.4522 -1.9824 -1.1263 29 1 -0.3934 0.4417 -0.7650 30 1 1.7924 -0.5139 0.8898 31 1 1.5877 2.4587 -1.2241 32 1 1.5614 2.4679 1.2086 33 1 2.2764 -0.2389 -4.5617 34 1 3.2195 -2.5027 -4.3929 35 1 3.8794 -4.1945 -4.1277 36 1 3.7308 -8.0663 -3.2749 37 1 2.4864 -6.8034 -3.6718 38 1 2.2424 -9.9292 -5.1275 39 1 0.0806 -10.4207 -6.1990 40 1 -0.4118 -9.5326 -8.4421 41 1 1.2530 -8.1432 -9.6090 42 1 3.4107 -7.6432 -8.5332 43 1 5.9107 -5.4856 -4.7699 44 1 6.1460 -7.1369 -4.0494 45 1 2.5009 -2.4698 -0.1637 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12550010_12496548.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:55:32 Heat of formation + Delta-G solvation = -77.105785 kcal Electronic energy + Delta-G solvation = -33253.169131 eV Core-core repulsion = 28438.836327 eV Total energy + Delta-G solvation = -4814.332804 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.097 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -50.47080 -41.66184 -40.29775 -40.04869 -39.09154 -38.21148 -37.80652 -37.06425 -34.68933 -32.81324 -32.31860 -32.01064 -31.85747 -27.34267 -27.01036 -26.85410 -24.87109 -24.12317 -23.72393 -23.52870 -21.73495 -21.11523 -19.90773 -19.39562 -19.03508 -18.85185 -18.14626 -17.91498 -17.77141 -17.16952 -16.98960 -16.95877 -16.87902 -16.27543 -16.09386 -15.91335 -15.63870 -15.59976 -15.49657 -15.03654 -14.90788 -14.70460 -14.50541 -14.29127 -14.03745 -14.01098 -13.84900 -13.82471 -13.73115 -13.36868 -13.24530 -13.22686 -13.11241 -12.95586 -12.36185 -12.23160 -12.13163 -11.98824 -11.75499 -11.36143 -11.27752 -11.18599 -10.87605 -10.38026 -10.28554 -10.12299 -10.05631 -9.83290 -4.97338 -0.98772 -0.52235 -0.18629 0.02523 0.28410 1.19422 1.54473 1.58121 1.77885 1.90701 1.96347 2.42765 2.54631 2.72410 2.90998 2.97403 3.09347 3.23300 3.38151 3.44482 3.49350 3.58743 3.60746 3.81939 3.88434 3.94161 3.97522 4.08957 4.11423 4.31347 4.37224 4.41675 4.47511 4.51391 4.56061 4.63739 4.70051 4.73498 4.77546 4.84629 4.88085 4.91022 4.94270 5.00238 5.07173 5.09711 5.26106 5.38417 5.39644 5.59846 5.85004 6.30382 6.40639 7.08573 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.083 4.083 3 Si 0.749 3.251 4 C -0.156 4.156 5 C 0.109 3.891 6 F -0.131 7.131 7 C -0.147 4.147 8 C -0.039 4.039 9 C -0.152 4.152 10 C 0.565 3.435 11 O -0.570 6.570 12 N -0.693 5.693 13 C 0.131 3.869 14 H 0.105 0.895 15 C -0.128 4.128 16 C -0.575 4.575 17 H 0.190 0.810 18 S 2.499 3.501 19 O -0.971 6.971 20 O -0.968 6.968 21 C -0.666 4.666 22 C -0.041 4.041 23 C -0.149 4.149 24 C -0.071 4.071 25 C -0.147 4.147 26 C -0.041 4.041 27 C -0.117 4.117 28 C -0.020 4.020 29 H 0.383 0.617 30 H 0.130 0.870 31 H -0.253 1.253 32 H -0.308 1.308 33 H 0.171 0.829 34 H 0.177 0.823 35 H 0.419 0.581 36 H 0.113 0.887 37 H 0.100 0.900 38 H 0.145 0.855 39 H 0.150 0.850 40 H 0.153 0.847 41 H 0.153 0.847 42 H 0.151 0.849 43 H 0.125 0.875 44 H 0.112 0.888 45 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.676 3.364 -5.658 6.617 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.191 4.191 3 Si 0.653 3.347 4 C -0.157 4.157 5 C 0.089 3.911 6 F -0.110 7.110 7 C -0.166 4.166 8 C -0.057 4.057 9 C -0.155 4.155 10 C 0.354 3.646 11 O -0.450 6.450 12 N -0.345 5.345 13 C 0.023 3.977 14 H 0.123 0.877 15 C -0.167 4.167 16 C -0.687 4.687 17 H 0.208 0.792 18 S 2.685 3.315 19 O -0.968 6.968 20 O -0.965 6.965 21 C -0.754 4.754 22 C -0.060 4.060 23 C -0.168 4.168 24 C -0.089 4.089 25 C -0.166 4.166 26 C -0.060 4.060 27 C -0.157 4.157 28 C -0.039 4.039 29 H 0.232 0.768 30 H 0.148 0.852 31 H -0.178 1.178 32 H -0.237 1.237 33 H 0.189 0.811 34 H 0.194 0.806 35 H 0.258 0.742 36 H 0.131 0.869 37 H 0.118 0.882 38 H 0.163 0.837 39 H 0.167 0.833 40 H 0.171 0.829 41 H 0.171 0.829 42 H 0.168 0.832 43 H 0.143 0.857 44 H 0.131 0.869 45 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -0.005 2.997 -4.488 5.397 hybrid contribution -2.175 0.336 -0.758 2.328 sum -2.180 3.334 -5.246 6.587 Atomic orbital electron populations 1.86623 1.18169 1.80254 1.50079 1.25148 0.83564 1.12030 0.98373 0.94654 0.90278 0.72829 0.76951 1.20136 1.04653 0.96415 0.94497 1.18148 0.97631 0.80344 0.94963 1.91556 1.84651 1.38320 1.96442 1.21410 1.00577 0.96059 0.98524 1.21530 0.93919 0.93335 0.96964 1.19941 1.05591 0.94718 0.95288 1.18307 0.76980 0.85439 0.83880 1.90821 1.56998 1.68203 1.28936 1.45377 1.62463 1.16083 1.10605 1.21662 0.94143 0.81556 1.00300 0.87744 1.23349 1.01652 1.01586 0.90147 1.31709 1.08742 1.19115 1.09173 0.79246 1.05196 0.74195 0.77570 0.74558 1.93537 1.62942 1.86941 1.53388 1.93540 1.84839 1.51243 1.66865 1.30467 1.22793 1.13944 1.08161 1.21199 0.92426 0.92592 0.99753 1.21670 0.97514 1.01168 0.96454 1.21909 0.99885 0.92999 0.94134 1.21682 0.93749 0.99513 1.01613 1.21238 0.97175 0.95409 0.92190 1.23216 0.93843 1.04251 0.94349 1.21030 0.92041 0.91525 0.99347 0.76750 0.85198 1.17769 1.23698 0.81138 0.80572 0.74204 0.86861 0.88169 0.83693 0.83268 0.82945 0.82887 0.83174 0.85716 0.86925 0.84195 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.03 12.88 -148.98 -1.92 -3.95 16 2 C -0.08 -0.01 2.81 71.24 0.20 0.19 16 3 Si 0.75 -0.34 30.81 68.60 2.11 1.78 16 4 C -0.16 0.20 4.78 -19.86 -0.09 0.11 16 5 C 0.11 -0.31 6.62 22.47 0.15 -0.16 16 6 F -0.13 0.01 12.57 44.97 0.57 0.57 16 7 C -0.15 1.19 10.01 22.27 0.22 1.41 16 8 C -0.04 0.39 9.54 22.51 0.21 0.61 16 9 C -0.15 0.56 5.87 -20.09 -0.12 0.44 16 10 C 0.57 -0.52 7.77 86.75 0.67 0.15 16 11 O -0.57 -4.72 15.96 -3.92 -0.06 -4.78 16 12 N -0.69 5.65 5.22 -443.01 -2.31 3.34 16 13 C 0.13 -0.85 4.30 45.52 0.20 -0.65 16 14 H 0.10 -0.27 7.50 -2.39 -0.02 -0.29 16 15 C -0.13 0.89 7.46 31.18 0.23 1.13 16 16 C -0.57 5.27 4.20 31.18 0.13 5.40 16 17 H 0.19 -3.09 8.14 -2.39 -0.02 -3.11 16 18 S 2.50 0.23 5.13 -56.49 -0.29 -0.06 16 19 O -0.97 -6.34 17.13 -127.65 -2.19 -8.53 16 20 O -0.97 -6.56 16.32 -127.65 -2.08 -8.64 16 21 C -0.67 -0.19 5.66 22.27 0.13 -0.07 16 22 C -0.04 0.00 9.47 22.27 0.21 0.21 16 23 C -0.15 0.30 10.05 22.27 0.22 0.52 16 24 C -0.07 0.25 10.05 22.27 0.22 0.47 16 25 C -0.15 0.44 10.05 22.27 0.22 0.67 16 26 C -0.04 0.04 9.47 22.27 0.21 0.25 16 27 C -0.12 1.13 7.41 31.12 0.23 1.36 16 28 C -0.02 0.01 9.21 22.52 0.21 0.22 16 29 H 0.38 -0.51 8.40 -74.06 -0.62 -1.13 16 30 H 0.13 -0.21 7.77 -2.39 -0.02 -0.23 16 31 H -0.25 -0.73 5.27 99.48 0.52 -0.20 16 32 H -0.31 -2.34 7.11 99.48 0.71 -1.64 16 33 H 0.17 -2.17 8.06 -2.91 -0.02 -2.20 16 34 H 0.18 -3.24 6.40 -2.91 -0.02 -3.26 16 35 H 0.42 -6.51 6.73 -92.71 -0.62 -7.14 16 36 H 0.11 -0.65 7.45 -2.39 -0.02 -0.67 16 37 H 0.10 -0.80 8.14 -2.39 -0.02 -0.82 16 38 H 0.15 -0.25 7.56 -2.91 -0.02 -0.27 16 39 H 0.15 -0.91 8.06 -2.91 -0.02 -0.93 16 40 H 0.15 -1.27 8.06 -2.91 -0.02 -1.30 16 41 H 0.15 -1.19 8.06 -2.91 -0.02 -1.21 16 42 H 0.15 -0.59 7.57 -2.91 -0.02 -0.61 16 43 H 0.12 -1.75 8.14 -2.39 -0.02 -1.77 16 44 H 0.11 -1.05 8.10 -2.39 -0.02 -1.07 16 45 H 0.14 0.14 7.59 -2.91 -0.02 0.12 16 Total: 0.00 -32.68 394.83 -3.03 -35.71 By element: Atomic # 1 Polarization: -27.39 SS G_CDS: -0.33 Total: -27.72 kcal Atomic # 6 Polarization: 8.81 SS G_CDS: 3.46 Total: 12.27 kcal Atomic # 7 Polarization: 5.65 SS G_CDS: -2.31 Total: 3.34 kcal Atomic # 8 Polarization: -19.65 SS G_CDS: -6.25 Total: -25.90 kcal Atomic # 9 Polarization: 0.01 SS G_CDS: 0.57 Total: 0.57 kcal Atomic # 14 Polarization: -0.34 SS G_CDS: 2.11 Total: 1.78 kcal Atomic # 16 Polarization: 0.23 SS G_CDS: -0.29 Total: -0.06 kcal Total: -32.68 -3.03 -35.71 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12550010_12496548.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.395 kcal (2) G-P(sol) polarization free energy of solvation -32.677 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.072 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.034 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.711 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.106 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds