Wall clock time and date at job start Sat Mar 6 2021 17:57:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.34653 * 124.85421 * 2 1 4 4 C 1.36773 * 108.39949 * 179.97438 * 3 2 1 5 5 C 1.47256 * 126.94617 * 180.02562 * 4 3 2 6 6 O 1.21628 * 120.00454 * 180.02562 * 5 4 3 7 7 N 1.34777 * 119.99881 * 0.02562 * 5 4 3 8 8 C 1.46506 * 119.99873 * 179.97438 * 7 5 4 9 9 H 1.09002 * 112.85053 * 23.81070 * 8 7 5 10 10 C 1.53781 * 113.61132 * 155.00131 * 8 7 5 11 11 C 1.53785 * 87.08168 * 89.11771 * 10 8 7 12 12 H 1.09005 * 113.61450 * 270.88472 * 11 10 8 13 13 S 1.81391 * 113.61492 * 140.06306 * 11 10 8 14 14 O 1.42106 * 110.54512 * 296.62440 * 13 11 10 15 15 O 1.42095 * 110.54358 * 73.37935 * 13 11 10 16 16 C 1.76207 * 104.45166 * 185.00123 * 13 11 10 17 17 C 1.38237 * 119.99978 * 269.72993 * 16 13 11 18 18 C 1.38228 * 119.99824 * 179.80401 * 17 16 13 19 19 C 1.38238 * 120.00160 * 0.40071 * 18 17 16 20 20 C 1.38232 * 119.99902 * 359.85217 * 19 18 17 21 21 C 1.38232 * 119.99789 * 89.99461 * 16 13 11 22 22 C 1.53782 * 113.61543 * 252.49944 * 8 7 5 23 23 C 1.46698 * 106.11238 * 0.26770 * 4 3 2 24 24 C 1.34485 * 106.32883 * 359.56171 * 23 4 3 25 25 C 1.50702 * 125.56708 * 180.14494 * 24 23 4 26 26 O 1.42898 * 109.46990 * 210.34063 * 25 24 23 27 27 Si 1.86298 * 109.47452 * 330.34142 * 25 24 23 28 28 H 1.08996 * 109.47232 * 90.01326 * 1 2 3 29 29 H 1.08996 * 109.47626 * 210.02175 * 1 2 3 30 30 H 1.09004 * 109.46802 * 330.02174 * 1 2 3 31 31 H 1.08001 * 125.80230 * 359.96864 * 3 2 1 32 32 H 0.96995 * 120.00018 * 0.27699 * 7 5 4 33 33 H 1.09001 * 113.61611 * 203.66335 * 10 8 7 34 34 H 1.08999 * 113.61877 * 334.48763 * 10 8 7 35 35 H 1.07996 * 119.99904 * 359.97438 * 17 16 13 36 36 H 1.08001 * 120.00050 * 180.22879 * 18 17 16 37 37 H 1.08003 * 119.99907 * 179.83421 * 19 18 17 38 38 H 1.08004 * 120.00283 * 179.97438 * 20 19 18 39 39 H 1.08000 * 120.00618 * 359.97438 * 21 16 13 40 40 H 1.09002 * 113.61503 * 25.43252 * 22 8 7 41 41 H 1.08994 * 113.61294 * 156.33804 * 22 8 7 42 42 H 1.07995 * 126.82899 * 179.74068 * 23 4 3 43 43 H 1.08996 * 109.47021 * 90.34456 * 25 24 23 44 44 H 0.96705 * 114.00456 * 60.00568 * 26 25 24 45 45 H 1.48498 * 110.00007 * 180.02562 * 27 25 24 46 46 H 1.48501 * 109.99783 * 301.31897 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1050 0.0000 4 6 3.5462 0.7176 0.0006 5 6 4.7284 1.5955 0.0013 6 8 5.8447 1.1125 0.0013 7 7 4.5735 2.9343 0.0020 8 6 5.7497 3.8078 0.0033 9 1 6.6377 3.3226 -0.4019 10 6 5.4832 5.2007 -0.5915 11 6 5.0864 5.6439 0.8266 12 1 4.0300 5.4960 1.0507 13 16 5.6724 7.3052 1.2593 14 8 7.0928 7.3464 1.2680 15 8 4.9149 8.2947 0.5765 16 6 5.2216 7.5037 2.9511 17 6 3.9932 8.0456 3.2801 18 6 3.6380 8.1975 4.6073 19 6 4.5145 7.8152 5.6056 20 6 5.7450 7.2782 5.2766 21 6 6.0986 7.1225 3.9493 22 6 5.9908 4.5145 1.3477 23 6 3.5375 -0.7494 -0.0056 24 6 2.2447 -1.1198 0.0005 25 6 1.7396 -2.5397 0.0005 26 8 0.4810 -2.5976 -0.6735 27 14 2.9649 -3.6347 -0.8771 28 1 -0.3633 -0.0002 -1.0276 29 1 -0.3634 -0.8897 0.5141 30 1 -0.3633 0.8902 0.5135 31 1 1.8768 2.1240 -0.0005 32 1 3.6834 3.3196 0.0061 33 1 6.3795 5.6934 -0.9682 34 1 4.6582 5.2209 -1.3036 35 1 3.3100 8.3477 2.5002 36 1 2.6768 8.6175 4.8644 37 1 4.2380 7.9365 6.6426 38 1 6.4300 6.9799 6.0565 39 1 7.0600 6.7027 3.6923 40 1 5.5745 3.9810 2.2022 41 1 7.0258 4.8196 1.5011 42 1 4.3980 -1.4019 -0.0108 43 1 1.6175 -2.8818 1.0282 44 1 0.5145 -2.3068 -1.5952 45 1 2.4782 -5.0377 -0.8844 46 1 3.1643 -3.1595 -2.2698 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12550010_13287730.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:57:05 Heat of formation + Delta-G solvation = -16.996297 kcal Electronic energy + Delta-G solvation = -31590.000961 eV Core-core repulsion = 27154.991286 eV Total energy + Delta-G solvation = -4435.009675 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.118 amu Computer time = 4.06 seconds Orbital eigenvalues (eV) -42.56796 -41.07476 -40.13826 -39.05840 -38.08559 -37.97009 -36.93865 -34.39716 -33.80404 -32.39691 -32.09681 -31.45527 -28.07948 -27.17628 -26.97624 -26.12985 -24.28261 -23.82664 -23.76435 -21.17844 -21.11692 -20.70183 -19.89761 -19.31219 -18.96405 -18.07369 -17.59263 -17.13229 -17.05306 -16.96804 -16.89055 -16.77871 -15.96130 -15.85934 -15.68126 -15.53473 -15.49832 -15.38049 -14.88820 -14.60770 -14.52105 -14.26297 -14.11558 -14.07024 -13.88120 -13.85259 -13.53615 -13.38850 -13.30459 -13.26804 -13.07629 -12.97766 -12.43595 -12.33743 -12.24468 -12.10418 -11.98693 -11.78561 -11.24715 -11.04359 -10.88720 -10.44266 -10.15505 -10.11766 -9.66139 -9.30191 -4.96559 -1.00297 -0.23000 0.21889 0.66258 0.97969 1.38269 1.60869 1.72554 1.76626 1.97311 2.11756 2.35772 2.56086 2.67711 2.83712 3.00984 3.03777 3.33442 3.45223 3.48277 3.61237 3.65780 3.69340 3.77879 3.82676 3.92533 4.03525 4.09957 4.24298 4.26959 4.30967 4.32760 4.35862 4.38136 4.43748 4.46702 4.57168 4.60225 4.68963 4.73426 4.84055 4.90974 4.93029 4.99307 5.15696 5.29170 5.43705 5.60684 5.74809 5.87383 6.04573 6.15561 6.52472 7.34960 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.426 5.426 3 C 0.050 3.950 4 C -0.228 4.228 5 C 0.595 3.405 6 O -0.535 6.535 7 N -0.716 5.716 8 C 0.139 3.861 9 H 0.119 0.881 10 C -0.119 4.119 11 C -0.602 4.602 12 H 0.153 0.847 13 S 2.499 3.501 14 O -0.929 6.929 15 O -0.936 6.936 16 C -0.658 4.658 17 C -0.027 4.027 18 C -0.141 4.141 19 C -0.065 4.065 20 C -0.140 4.140 21 C -0.022 4.022 22 C -0.124 4.124 23 C -0.129 4.129 24 C -0.021 4.021 25 C -0.049 4.049 26 O -0.535 6.535 27 Si 0.711 3.289 28 H 0.075 0.925 29 H 0.100 0.900 30 H 0.082 0.918 31 H 0.170 0.830 32 H 0.398 0.602 33 H 0.110 0.890 34 H 0.098 0.902 35 H 0.140 0.860 36 H 0.133 0.867 37 H 0.131 0.869 38 H 0.134 0.866 39 H 0.142 0.858 40 H 0.093 0.907 41 H 0.115 0.885 42 H 0.159 0.841 43 H 0.122 0.878 44 H 0.377 0.623 45 H -0.254 1.254 46 H -0.257 1.257 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.438 -1.518 2.487 6.170 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.101 5.101 3 C -0.086 4.086 4 C -0.238 4.238 5 C 0.385 3.615 6 O -0.411 6.411 7 N -0.368 5.368 8 C 0.032 3.968 9 H 0.137 0.863 10 C -0.158 4.158 11 C -0.712 4.712 12 H 0.171 0.829 13 S 2.680 3.320 14 O -0.927 6.927 15 O -0.933 6.933 16 C -0.745 4.745 17 C -0.045 4.045 18 C -0.159 4.159 19 C -0.083 4.083 20 C -0.158 4.158 21 C -0.041 4.041 22 C -0.164 4.164 23 C -0.153 4.153 24 C -0.129 4.129 25 C -0.159 4.159 26 O -0.341 6.341 27 Si 0.610 3.390 28 H 0.094 0.906 29 H 0.118 0.882 30 H 0.101 0.899 31 H 0.187 0.813 32 H 0.232 0.768 33 H 0.128 0.872 34 H 0.116 0.884 35 H 0.158 0.842 36 H 0.151 0.849 37 H 0.149 0.851 38 H 0.152 0.848 39 H 0.160 0.840 40 H 0.111 0.889 41 H 0.133 0.867 42 H 0.176 0.824 43 H 0.140 0.860 44 H 0.225 0.775 45 H -0.178 1.178 46 H -0.181 1.181 Dipole moment (debyes) X Y Z Total from point charges -4.651 -2.065 1.883 5.426 hybrid contribution -2.080 0.645 0.219 2.189 sum -6.731 -1.420 2.101 7.193 Atomic orbital electron populations 1.22264 0.76267 1.05159 1.03886 1.43487 1.07023 1.05018 1.54542 1.21912 0.90142 0.91767 1.04799 1.20254 0.91319 0.93983 1.18246 1.17379 0.88187 0.80973 0.75001 1.90804 1.25715 1.75000 1.49604 1.45475 1.08799 1.05665 1.76838 1.21603 0.90430 0.89361 0.95425 0.86346 1.23100 1.03853 0.96573 0.92308 1.31769 1.11529 1.20313 1.07562 0.82864 1.05421 0.75251 0.76890 0.74436 1.93592 1.26934 1.86151 1.85989 1.93580 1.72791 1.54520 1.72383 1.30521 1.04418 1.15661 1.23861 1.20980 0.93673 0.92229 0.97660 1.21351 1.00541 1.01266 0.92790 1.21570 0.93327 0.93420 1.00001 1.21374 0.97277 1.00617 0.96578 1.20999 0.97668 0.92987 0.92437 1.23256 0.99639 0.93749 0.99758 1.21640 0.94873 0.92978 1.05782 1.20828 0.90701 0.89015 1.12395 1.24775 0.92916 0.94671 1.03530 1.86577 1.29524 1.88982 1.28991 0.94238 0.85145 0.77491 0.82155 0.90610 0.88174 0.89942 0.81325 0.76771 0.87155 0.88391 0.84175 0.84896 0.85060 0.84802 0.84011 0.88882 0.86715 0.82376 0.86004 0.77535 1.17810 1.18073 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 49. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.25 9.81 59.85 0.59 0.34 16 2 N -0.43 0.63 3.09 -119.90 -0.37 0.26 16 3 C 0.05 -0.09 10.83 -16.84 -0.18 -0.27 16 4 C -0.23 -0.19 6.29 -103.35 -0.65 -0.84 16 5 C 0.60 1.16 7.81 -12.60 -0.10 1.06 16 6 O -0.53 -3.13 16.57 5.25 0.09 -3.05 16 7 N -0.72 1.06 5.25 -54.14 -0.28 0.78 16 8 C 0.14 -0.20 4.32 -67.11 -0.29 -0.49 16 9 H 0.12 -0.01 7.46 -51.93 -0.39 -0.39 16 10 C -0.12 0.34 7.42 -25.92 -0.19 0.15 16 11 C -0.60 1.80 4.19 -25.91 -0.11 1.69 16 12 H 0.15 -0.84 8.14 -51.93 -0.42 -1.26 16 13 S 2.50 1.11 5.09 -107.50 -0.55 0.57 16 14 O -0.93 -2.96 16.45 -57.54 -0.95 -3.90 16 15 O -0.94 -3.35 17.12 -57.54 -0.98 -4.33 16 16 C -0.66 -0.33 5.66 -39.58 -0.22 -0.55 16 17 C -0.03 0.00 9.47 -39.59 -0.37 -0.38 16 18 C -0.14 0.10 10.05 -39.59 -0.40 -0.30 16 19 C -0.07 0.06 10.05 -39.58 -0.40 -0.34 16 20 C -0.14 0.08 10.05 -39.58 -0.40 -0.32 16 21 C -0.02 0.00 9.47 -39.58 -0.37 -0.38 16 22 C -0.12 0.28 7.44 -25.92 -0.19 0.09 16 23 C -0.13 -0.11 9.49 -37.49 -0.36 -0.46 16 24 C -0.02 0.01 6.14 -81.86 -0.50 -0.49 16 25 C -0.05 0.08 2.87 36.01 0.10 0.18 16 26 O -0.53 0.67 10.32 -35.23 -0.36 0.30 16 27 Si 0.71 -1.01 31.11 -169.99 -5.29 -6.30 16 28 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 29 H 0.10 -0.30 6.73 -51.93 -0.35 -0.65 16 30 H 0.08 -0.44 8.13 -51.93 -0.42 -0.86 16 31 H 0.17 -0.89 7.45 -52.49 -0.39 -1.28 16 32 H 0.40 -1.73 7.64 -40.82 -0.31 -2.05 16 33 H 0.11 -0.37 8.10 -51.93 -0.42 -0.79 16 34 H 0.10 -0.41 8.14 -51.93 -0.42 -0.83 16 35 H 0.14 -0.18 7.56 -52.49 -0.40 -0.57 16 36 H 0.13 -0.37 8.06 -52.49 -0.42 -0.79 16 37 H 0.13 -0.41 8.06 -52.48 -0.42 -0.84 16 38 H 0.13 -0.35 8.06 -52.48 -0.42 -0.77 16 39 H 0.14 -0.16 7.57 -52.49 -0.40 -0.56 16 40 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 41 H 0.11 -0.28 7.54 -51.93 -0.39 -0.68 16 42 H 0.16 -0.01 6.88 -52.49 -0.36 -0.37 16 43 H 0.12 -0.27 7.96 -51.93 -0.41 -0.68 16 44 H 0.38 -1.31 8.70 45.56 0.40 -0.91 16 45 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 46 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 LS Contribution 399.03 15.07 6.01 6.01 Total: 0.00 -13.84 399.03 -12.74 -26.58 By element: Atomic # 1 Polarization: -9.61 SS G_CDS: -6.00 Total: -15.62 kcal Atomic # 6 Polarization: 2.74 SS G_CDS: -4.05 Total: -1.31 kcal Atomic # 7 Polarization: 1.69 SS G_CDS: -0.65 Total: 1.04 kcal Atomic # 8 Polarization: -8.77 SS G_CDS: -2.21 Total: -10.98 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.29 Total: -6.30 kcal Atomic # 16 Polarization: 1.11 SS G_CDS: -0.55 Total: 0.57 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -13.84 -12.74 -26.58 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12550010_13287730.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.585 kcal (2) G-P(sol) polarization free energy of solvation -13.843 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.258 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.738 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.582 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.996 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 4.06 seconds