Wall clock time and date at job start Sat Mar 6 2021 17:58:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86305 * 109.47325 * 2 1 4 4 C 1.50698 * 109.47460 * 120.00340 * 2 1 3 5 5 C 1.34849 * 125.88991 * 244.97464 * 4 2 1 6 6 C 1.40896 * 107.41486 * 180.02562 * 5 4 2 7 7 C 1.34847 * 107.41771 * 0.22942 * 6 5 4 8 8 C 1.50696 * 125.89295 * 179.74847 * 7 6 5 9 9 C 1.50699 * 109.47061 * 85.01761 * 8 7 6 10 10 O 1.21278 * 120.00198 * 0.02562 * 9 8 7 11 11 N 1.34783 * 119.99974 * 180.02562 * 9 8 7 12 12 C 1.46503 * 119.99846 * 180.02562 * 11 9 8 13 13 H 1.09001 * 112.85363 * 25.33372 * 12 11 9 14 14 C 1.53778 * 113.61215 * 156.53217 * 12 11 9 15 15 C 1.53782 * 87.08351 * 89.11621 * 14 12 11 16 16 H 1.08998 * 113.61047 * 270.88256 * 15 14 12 17 17 S 1.81400 * 113.61561 * 140.06541 * 15 14 12 18 18 O 1.42104 * 110.54138 * 296.62459 * 17 15 14 19 19 O 1.42098 * 110.54311 * 73.37361 * 17 15 14 20 20 C 1.76198 * 104.44716 * 184.99898 * 17 15 14 21 21 C 1.38236 * 119.99992 * 269.72495 * 20 17 15 22 22 C 1.38233 * 120.00011 * 179.76864 * 21 20 17 23 23 C 1.38236 * 119.99789 * 0.50602 * 22 21 20 24 24 C 1.38228 * 120.00190 * 359.74784 * 23 22 21 25 25 C 1.38236 * 119.99944 * 89.99962 * 20 17 15 26 26 C 1.53783 * 113.61182 * 254.13588 * 12 11 9 27 27 N 1.36338 * 125.88810 * 64.99786 * 4 2 1 28 28 H 0.96698 * 114.00286 * 59.99729 * 1 2 3 29 29 H 1.09005 * 109.46797 * 240.00607 * 2 1 3 30 30 H 1.48504 * 109.99566 * 60.00324 * 3 2 1 31 31 H 1.48499 * 109.99986 * 181.32341 * 3 2 1 32 32 H 1.07996 * 126.29224 * 0.03701 * 5 4 2 33 33 H 1.08002 * 126.28729 * 179.97438 * 6 5 4 34 34 H 1.08996 * 109.47934 * 205.02053 * 8 7 6 35 35 H 1.09001 * 109.47319 * 325.02559 * 8 7 6 36 36 H 0.96998 * 119.99910 * 0.02562 * 11 9 8 37 37 H 1.09002 * 113.61346 * 203.66163 * 14 12 11 38 38 H 1.09000 * 113.61399 * 334.56480 * 14 12 11 39 39 H 1.08002 * 120.00161 * 359.97438 * 21 20 17 40 40 H 1.08002 * 120.00032 * 180.22955 * 22 21 20 41 41 H 1.08000 * 119.99923 * 179.72570 * 23 22 21 42 42 H 1.08001 * 120.00382 * 179.97438 * 24 23 22 43 43 H 1.07997 * 120.00240 * 0.02562 * 25 20 17 44 44 H 1.08996 * 113.61515 * 25.43594 * 26 12 11 45 45 H 1.09006 * 113.61362 * 156.33571 * 26 12 11 46 46 H 0.96999 * 125.64118 * 359.97271 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.6307 -0.1488 2.2374 6 6 2.8987 -1.1608 3.1804 7 6 2.3574 -2.3033 2.7112 8 6 2.4044 -3.6475 3.3909 9 6 1.2741 -3.7488 4.3825 10 8 0.5058 -2.8210 4.5231 11 7 1.1171 -4.8704 5.1132 12 6 0.0180 -4.9691 6.0768 13 1 -0.8242 -4.3243 5.8257 14 6 -0.3891 -6.4162 6.4007 15 6 0.6618 -6.3775 7.5227 16 1 1.6555 -6.6891 7.2011 17 16 0.1257 -7.1983 9.0490 18 8 -0.9995 -6.5318 9.6049 19 8 0.1341 -8.6098 8.8855 20 6 1.4262 -6.8860 10.1961 21 6 2.4820 -7.7720 10.3020 22 6 3.5047 -7.5245 11.1986 23 6 3.4662 -6.3965 11.9967 24 6 2.4079 -5.5133 11.8945 25 6 1.3878 -5.7580 10.9942 26 6 0.4704 -4.8491 7.5416 27 7 1.7577 -2.0320 1.5171 28 1 -0.3934 0.4417 -0.7650 29 1 1.7923 -0.5138 -0.8901 30 1 1.5616 2.4678 1.2086 31 1 3.5347 1.7703 -0.0322 32 1 2.9301 0.8864 2.3081 33 1 3.4417 -1.0439 4.1066 34 1 2.3048 -4.4357 2.6448 35 1 3.3555 -3.7582 3.9117 36 1 1.7319 -5.6123 5.0010 37 1 -1.4124 -6.5109 6.7640 38 1 -0.1537 -7.1242 5.6061 39 1 2.5096 -8.6558 9.6820 40 1 4.3314 -8.2148 11.2787 41 1 4.2630 -6.2054 12.7003 42 1 2.3776 -4.6321 12.5183 43 1 0.5605 -5.0683 10.9150 44 1 1.3993 -4.2928 7.6676 45 1 -0.3183 -4.5161 8.2163 46 1 1.2884 -2.6739 0.9617 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12550010_14644196.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:58:33 Heat of formation + Delta-G solvation = -23.242683 kcal Electronic energy + Delta-G solvation = -31156.234328 eV Core-core repulsion = 26720.953790 eV Total energy + Delta-G solvation = -4435.280539 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.118 amu Computer time = 3.83 seconds Orbital eigenvalues (eV) -42.33778 -41.27233 -40.15853 -39.35326 -38.12251 -37.65325 -36.97408 -34.51150 -33.10272 -32.41708 -32.11552 -31.91995 -29.62132 -27.25395 -27.01972 -25.04809 -24.24566 -23.82689 -22.39051 -21.32035 -21.19204 -21.00302 -19.96280 -19.18134 -18.55079 -18.43993 -18.16347 -17.73089 -17.17978 -17.06309 -16.90325 -16.37715 -16.02913 -15.73493 -15.64743 -15.44753 -15.14996 -15.03926 -14.77695 -14.62647 -14.44698 -14.27228 -14.15779 -14.09420 -13.97941 -13.89300 -13.41385 -13.31365 -13.30247 -13.11467 -13.01352 -12.88294 -12.45713 -12.35652 -12.32325 -12.17096 -11.90179 -11.82289 -11.30943 -10.99281 -10.46793 -10.43613 -10.27444 -10.13889 -9.75982 -8.93754 -4.97339 -1.04056 -0.25201 0.19990 1.05888 1.26902 1.50701 1.70107 1.73304 1.82715 2.07941 2.15872 2.33231 2.42482 2.61341 2.78293 2.95808 3.29112 3.34763 3.42670 3.54835 3.55612 3.74941 3.80833 3.83710 3.90948 3.91564 3.96836 4.20560 4.22520 4.23403 4.24642 4.27260 4.31621 4.40034 4.48571 4.51307 4.58309 4.61392 4.73462 4.78058 4.82180 4.97208 5.13962 5.24961 5.27476 5.30394 5.30740 5.72914 6.01208 6.14132 6.28804 6.55243 6.64309 7.10407 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.053 4.053 3 Si 0.714 3.286 4 C 0.037 3.963 5 C -0.194 4.194 6 C -0.170 4.170 7 C 0.035 3.965 8 C -0.070 4.070 9 C 0.513 3.487 10 O -0.514 6.514 11 N -0.717 5.717 12 C 0.136 3.864 13 H 0.116 0.884 14 C -0.118 4.118 15 C -0.603 4.603 16 H 0.155 0.845 17 S 2.499 3.501 18 O -0.930 6.930 19 O -0.935 6.935 20 C -0.658 4.658 21 C -0.026 4.026 22 C -0.140 4.140 23 C -0.065 4.065 24 C -0.140 4.140 25 C -0.023 4.023 26 C -0.123 4.123 27 N -0.533 5.533 28 H 0.383 0.617 29 H 0.070 0.930 30 H -0.249 1.249 31 H -0.254 1.254 32 H 0.134 0.866 33 H 0.137 0.863 34 H 0.102 0.898 35 H 0.118 0.882 36 H 0.402 0.598 37 H 0.110 0.890 38 H 0.098 0.902 39 H 0.141 0.859 40 H 0.134 0.866 41 H 0.132 0.868 42 H 0.134 0.866 43 H 0.142 0.858 44 H 0.093 0.907 45 H 0.114 0.886 46 H 0.413 0.587 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.994 -0.361 -4.764 6.911 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.163 4.163 3 Si 0.613 3.387 4 C -0.076 4.076 5 C -0.219 4.219 6 C -0.195 4.195 7 C -0.079 4.079 8 C -0.111 4.111 9 C 0.299 3.701 10 O -0.387 6.387 11 N -0.370 5.370 12 C 0.029 3.971 13 H 0.134 0.866 14 C -0.157 4.157 15 C -0.712 4.712 16 H 0.173 0.827 17 S 2.680 3.320 18 O -0.927 6.927 19 O -0.932 6.932 20 C -0.745 4.745 21 C -0.045 4.045 22 C -0.159 4.159 23 C -0.083 4.083 24 C -0.158 4.158 25 C -0.041 4.041 26 C -0.163 4.163 27 N -0.128 5.128 28 H 0.231 0.769 29 H 0.088 0.912 30 H -0.174 1.174 31 H -0.179 1.179 32 H 0.151 0.849 33 H 0.155 0.845 34 H 0.120 0.880 35 H 0.136 0.864 36 H 0.237 0.763 37 H 0.129 0.871 38 H 0.117 0.883 39 H 0.159 0.841 40 H 0.152 0.848 41 H 0.150 0.850 42 H 0.152 0.848 43 H 0.159 0.841 44 H 0.111 0.889 45 H 0.133 0.867 46 H 0.250 0.750 Dipole moment (debyes) X Y Z Total from point charges 4.180 0.033 -3.605 5.520 hybrid contribution 1.135 -1.089 0.125 1.578 sum 5.315 -1.056 -3.480 6.440 Atomic orbital electron populations 1.86530 1.17375 1.81864 1.49787 1.24426 0.85584 1.10953 0.95339 0.95368 0.80463 0.75917 0.86911 1.19659 1.05595 0.83933 0.98409 1.20532 1.06758 0.99129 0.95440 1.20543 1.06749 0.91508 1.00667 1.19414 1.03847 0.95759 0.88834 1.20117 0.99106 0.94379 0.97466 1.20648 0.86177 0.82074 0.81201 1.90804 1.44403 1.37186 1.66326 1.45655 1.31891 1.18437 1.41033 1.21635 0.90781 0.96710 0.87992 0.86630 1.23078 0.97738 0.98478 0.96422 1.31824 1.10754 1.10177 1.18457 0.82716 1.05409 0.75010 0.75223 0.76347 1.93593 1.46897 1.76558 1.75637 1.93583 1.86297 1.27147 1.86154 1.30505 1.18853 1.05437 1.19722 1.20987 0.90990 0.96444 0.96092 1.21359 0.99338 0.98236 0.96965 1.21574 0.97281 0.93108 0.96299 1.21374 0.94558 1.00455 0.99459 1.20996 0.97267 0.93889 0.91990 1.23284 1.04508 0.89588 0.98906 1.41756 1.43711 1.09107 1.18184 0.76901 0.91235 1.17371 1.17893 0.84866 0.84490 0.87989 0.86369 0.76298 0.87144 0.88315 0.84135 0.84835 0.85019 0.84798 0.84061 0.88886 0.86732 0.75001 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 43. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.54 12.86 -35.23 -0.45 -1.00 16 2 C -0.05 -0.03 3.07 36.00 0.11 0.08 16 3 Si 0.71 -0.43 30.60 -169.99 -5.20 -5.63 16 4 C 0.04 0.13 6.53 -81.79 -0.53 -0.40 16 5 C -0.19 -0.87 9.37 -39.78 -0.37 -1.24 16 6 C -0.17 -0.62 10.76 -39.78 -0.43 -1.05 16 7 C 0.03 0.07 5.66 -81.79 -0.46 -0.39 16 8 C -0.07 0.13 6.24 -29.04 -0.18 -0.05 16 9 C 0.51 0.22 7.82 -10.98 -0.09 0.14 16 10 O -0.51 -2.87 15.65 5.56 0.09 -2.78 16 11 N -0.72 1.85 5.26 -53.01 -0.28 1.57 16 12 C 0.14 -0.23 4.30 -67.12 -0.29 -0.52 16 13 H 0.12 0.00 7.50 -51.93 -0.39 -0.39 16 14 C -0.12 0.36 7.41 -25.92 -0.19 0.17 16 15 C -0.60 1.86 4.21 -25.78 -0.11 1.75 16 16 H 0.15 -0.88 8.14 -51.93 -0.42 -1.30 16 17 S 2.50 1.26 5.09 -107.50 -0.55 0.72 16 18 O -0.93 -3.09 16.46 -57.54 -0.95 -4.03 16 19 O -0.93 -3.38 17.12 -57.54 -0.98 -4.37 16 20 C -0.66 -0.38 5.66 -39.58 -0.22 -0.60 16 21 C -0.03 0.00 9.47 -39.58 -0.37 -0.38 16 22 C -0.14 0.09 10.05 -39.58 -0.40 -0.31 16 23 C -0.06 0.06 10.05 -39.59 -0.40 -0.34 16 24 C -0.14 0.07 10.05 -39.58 -0.40 -0.33 16 25 C -0.02 -0.01 9.47 -39.58 -0.37 -0.38 16 26 C -0.12 0.28 7.46 -25.78 -0.19 0.09 16 27 N -0.53 -1.18 6.07 -5.44 -0.03 -1.22 16 28 H 0.38 -1.67 8.74 45.56 0.40 -1.28 16 29 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 30 H -0.25 -0.78 7.11 56.52 0.40 -0.37 16 31 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 32 H 0.13 0.52 6.24 -52.49 -0.33 0.19 16 33 H 0.14 0.30 8.06 -52.49 -0.42 -0.13 16 34 H 0.10 -0.45 8.14 -51.93 -0.42 -0.88 16 35 H 0.12 -0.50 8.14 -51.93 -0.42 -0.92 16 36 H 0.40 -2.28 8.70 -40.82 -0.36 -2.64 16 37 H 0.11 -0.37 8.10 -51.93 -0.42 -0.79 16 38 H 0.10 -0.45 8.14 -51.93 -0.42 -0.87 16 39 H 0.14 -0.17 7.56 -52.49 -0.40 -0.57 16 40 H 0.13 -0.37 8.06 -52.49 -0.42 -0.79 16 41 H 0.13 -0.41 8.06 -52.49 -0.42 -0.83 16 42 H 0.13 -0.33 8.06 -52.49 -0.42 -0.75 16 43 H 0.14 -0.13 7.57 -52.49 -0.40 -0.53 16 44 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 45 H 0.11 -0.26 7.55 -51.93 -0.39 -0.65 16 46 H 0.41 -0.01 8.96 -40.82 -0.37 -0.37 16 LS Contribution 402.74 15.07 6.07 6.07 Total: 0.00 -16.29 402.74 -13.26 -29.54 By element: Atomic # 1 Polarization: -9.04 SS G_CDS: -6.06 Total: -15.10 kcal Atomic # 6 Polarization: 1.13 SS G_CDS: -4.90 Total: -3.77 kcal Atomic # 7 Polarization: 0.67 SS G_CDS: -0.31 Total: 0.36 kcal Atomic # 8 Polarization: -9.88 SS G_CDS: -2.30 Total: -12.18 kcal Atomic # 14 Polarization: -0.43 SS G_CDS: -5.20 Total: -5.63 kcal Atomic # 16 Polarization: 1.26 SS G_CDS: -0.55 Total: 0.72 kcal Total LS contribution 6.07 Total: 6.07 kcal Total: -16.29 -13.26 -29.54 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12550010_14644196.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.299 kcal (2) G-P(sol) polarization free energy of solvation -16.286 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.988 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.255 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.541 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.243 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.83 seconds