Wall clock time and date at job start Sat Mar 6 2021 17:59:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46645 * 2 1 4 4 C 1.50696 * 109.47131 * 240.00209 * 2 1 3 5 5 C 1.38712 * 120.02639 * 284.71916 * 4 2 1 6 6 O 1.35904 * 120.05330 * 0.02562 * 5 4 2 7 7 C 1.42907 * 116.99574 * 180.02562 * 6 5 4 8 8 C 1.50703 * 109.46730 * 180.02562 * 7 6 5 9 9 O 1.21278 * 120.00185 * 359.97438 * 8 7 6 10 10 N 1.34780 * 119.99777 * 180.02562 * 8 7 6 11 11 C 1.46501 * 119.99666 * 179.97438 * 10 8 7 12 12 H 1.08994 * 112.84974 * 334.65538 * 11 10 8 13 13 C 1.53773 * 113.61569 * 105.85940 * 11 10 8 14 14 C 1.54053 * 86.98763 * 89.15630 * 13 11 10 15 15 H 1.08990 * 113.61569 * 270.88485 * 14 13 11 16 16 S 1.81397 * 113.69531 * 139.98745 * 14 13 11 17 17 O 1.42101 * 110.54472 * 194.09625 * 16 14 13 18 18 O 1.42104 * 110.54661 * 330.84479 * 16 14 13 19 19 C 1.76198 * 104.44966 * 82.47005 * 16 14 13 20 20 C 1.38233 * 120.00032 * 269.72405 * 19 16 14 21 21 C 1.38235 * 119.99934 * 179.80711 * 20 19 16 22 22 C 1.38233 * 120.00109 * 0.40311 * 21 20 19 23 23 C 1.38238 * 120.00098 * 359.85106 * 22 21 20 24 24 C 1.38232 * 119.99691 * 359.96420 * 23 22 21 25 25 C 1.53780 * 113.60877 * 203.46550 * 11 10 8 26 26 C 1.38758 * 119.88880 * 179.75245 * 5 4 2 27 27 C 1.38119 * 119.94167 * 0.52164 * 26 5 4 28 28 C 1.38286 * 120.05861 * 359.73012 * 27 26 5 29 29 C 1.38167 * 120.03100 * 104.99624 * 4 2 1 30 30 H 0.96700 * 114.00311 * 60.00382 * 1 2 3 31 31 H 1.08999 * 109.47293 * 119.99810 * 2 1 3 32 32 H 1.48499 * 109.99670 * 298.67876 * 3 2 1 33 33 H 1.48497 * 110.00233 * 59.99845 * 3 2 1 34 34 H 1.08997 * 109.46648 * 299.99500 * 7 6 5 35 35 H 1.08992 * 109.47580 * 59.99726 * 7 6 5 36 36 H 0.96993 * 119.99725 * 359.97438 * 10 8 7 37 37 H 1.08999 * 113.61360 * 203.65871 * 13 11 10 38 38 H 1.09000 * 113.61930 * 334.56585 * 13 11 10 39 39 H 1.07994 * 120.00096 * 0.02562 * 20 19 16 40 40 H 1.08005 * 120.00377 * 180.22899 * 21 20 19 41 41 H 1.08004 * 120.00265 * 179.83217 * 22 21 20 42 42 H 1.07997 * 120.00101 * 179.97438 * 23 22 21 43 43 H 1.08000 * 119.99981 * 180.02562 * 24 23 22 44 44 H 1.09002 * 113.61807 * 25.43488 * 25 11 10 45 45 H 1.09004 * 113.61249 * 156.33321 * 25 11 10 46 46 H 1.08003 * 120.02509 * 180.27445 * 26 5 4 47 47 H 1.07998 * 119.97330 * 179.74612 * 27 26 5 48 48 H 1.08001 * 119.94595 * 180.02562 * 28 27 26 49 49 H 1.07997 * 119.96994 * 359.97300 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 1.8750 -2.0943 -1.3046 6 8 1.3664 -2.8113 -0.2681 7 6 1.3402 -4.2327 -0.4136 8 6 0.7469 -4.8535 0.8249 9 8 0.3829 -4.1483 1.7419 10 7 0.6218 -6.1925 0.9137 11 6 0.0455 -6.7960 2.1179 12 1 0.1622 -6.1699 3.0024 13 6 -1.3860 -7.3211 1.9191 14 6 -0.7496 -8.6566 1.4896 15 1 -0.5384 -8.7162 0.4221 16 16 -1.6248 -10.1163 2.1171 17 8 -0.8244 -11.2807 1.9664 18 8 -2.2647 -9.8219 3.3513 19 6 -2.9536 -10.3529 0.9844 20 6 -4.1735 -9.7443 1.2132 21 6 -5.2147 -9.9267 0.3224 22 6 -5.0386 -10.7243 -0.7927 23 6 -3.8203 -11.3372 -1.0188 24 6 -2.7780 -11.1517 -0.1301 25 6 0.4697 -8.2577 2.3375 26 6 2.3336 -2.7452 -2.4410 27 6 2.8548 -2.0145 -3.4908 28 6 2.9147 -0.6352 -3.4124 29 6 2.4537 0.0160 -2.2834 30 1 -0.3934 0.4416 -0.7651 31 1 1.7924 -0.5138 0.8900 32 1 1.5877 2.4585 -1.2243 33 1 1.5613 2.4680 1.2084 34 1 0.7331 -4.4981 -1.2791 35 1 2.3557 -4.6023 -0.5550 36 1 0.9132 -6.7565 0.1804 37 1 -1.9589 -7.3879 2.8440 38 1 -1.9289 -6.8173 1.1193 39 1 -4.3120 -9.1236 2.0860 40 1 -6.1668 -9.4483 0.4992 41 1 -5.8530 -10.8690 -1.4873 42 1 -3.6829 -11.9607 -1.8899 43 1 -1.8260 -11.6301 -0.3069 44 1 1.4242 -8.5096 1.8754 45 1 0.4033 -8.5802 3.3767 46 1 2.2867 -3.8224 -2.5028 47 1 3.2156 -2.5208 -4.3739 48 1 3.3222 -0.0656 -4.2346 49 1 2.5014 1.0933 -2.2245 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12550010_2989392.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:59:02 Heat of formation + Delta-G solvation = -68.868397 kcal Electronic energy + Delta-G solvation = -34904.704295 eV Core-core repulsion = 30085.962855 eV Total energy + Delta-G solvation = -4818.741440 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.122 amu Computer time = 4.14 seconds Orbital eigenvalues (eV) -41.78037 -41.16737 -40.17484 -39.58465 -38.38750 -38.13122 -37.50164 -36.98998 -34.61106 -32.79169 -32.43434 -32.13187 -31.37296 -29.68920 -27.27527 -26.86517 -26.65112 -24.30684 -23.84706 -23.74510 -22.67500 -22.00565 -21.22971 -19.99062 -19.57770 -19.19051 -18.54863 -18.16501 -17.83968 -17.52412 -17.21955 -17.08490 -16.99469 -16.92754 -16.57066 -16.09776 -15.87023 -15.70301 -15.65984 -15.45749 -15.37506 -15.04811 -14.84186 -14.64153 -14.34778 -14.19206 -14.14850 -14.03614 -13.91352 -13.66535 -13.51142 -13.33247 -13.12447 -13.08793 -13.02770 -12.54425 -12.37887 -12.36691 -12.26014 -12.18721 -11.87038 -11.85044 -11.59057 -11.34240 -11.00678 -10.49040 -10.43321 -10.37241 -10.15650 -10.05637 -9.27160 -4.91486 -1.06008 -0.26983 0.15579 0.18325 0.34918 1.29116 1.35128 1.35595 1.60845 1.71994 2.02005 2.31457 2.41913 2.56476 2.62068 2.75936 2.92702 3.25897 3.28995 3.37683 3.50032 3.53032 3.65997 3.72352 3.73648 3.79286 3.79465 3.81895 3.89437 3.97160 4.17298 4.19923 4.20315 4.20989 4.28675 4.28858 4.36501 4.44286 4.46572 4.56664 4.58711 4.66193 4.67428 4.80564 4.93216 4.95514 5.12363 5.18909 5.20677 5.25903 5.26599 5.42843 5.62583 5.71270 6.11044 6.28085 6.56520 6.96502 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.065 4.065 3 Si 0.689 3.311 4 C -0.145 4.145 5 C 0.151 3.849 6 O -0.277 6.277 7 C 0.040 3.960 8 C 0.519 3.481 9 O -0.501 6.501 10 N -0.713 5.713 11 C 0.137 3.863 12 H 0.119 0.881 13 C -0.124 4.124 14 C -0.604 4.604 15 H 0.155 0.845 16 S 2.500 3.500 17 O -0.934 6.934 18 O -0.929 6.929 19 C -0.659 4.659 20 C -0.023 4.023 21 C -0.140 4.140 22 C -0.065 4.065 23 C -0.140 4.140 24 C -0.026 4.026 25 C -0.116 4.116 26 C -0.212 4.212 27 C -0.072 4.072 28 C -0.150 4.150 29 C -0.083 4.083 30 H 0.370 0.630 31 H 0.118 0.882 32 H -0.260 1.260 33 H -0.257 1.257 34 H 0.094 0.906 35 H 0.096 0.904 36 H 0.403 0.597 37 H 0.118 0.882 38 H 0.093 0.907 39 H 0.142 0.858 40 H 0.134 0.866 41 H 0.132 0.868 42 H 0.134 0.866 43 H 0.141 0.859 44 H 0.100 0.900 45 H 0.111 0.889 46 H 0.129 0.871 47 H 0.128 0.872 48 H 0.129 0.871 49 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.075 -0.546 -7.644 8.257 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.326 6.326 2 C -0.175 4.175 3 Si 0.590 3.410 4 C -0.146 4.146 5 C 0.105 3.895 6 O -0.189 6.189 7 C -0.039 4.039 8 C 0.303 3.697 9 O -0.373 6.373 10 N -0.367 5.367 11 C 0.030 3.970 12 H 0.137 0.863 13 C -0.164 4.164 14 C -0.714 4.714 15 H 0.173 0.827 16 S 2.680 3.320 17 O -0.931 6.931 18 O -0.926 6.926 19 C -0.746 4.746 20 C -0.041 4.041 21 C -0.159 4.159 22 C -0.083 4.083 23 C -0.159 4.159 24 C -0.045 4.045 25 C -0.155 4.155 26 C -0.231 4.231 27 C -0.091 4.091 28 C -0.169 4.169 29 C -0.101 4.101 30 H 0.217 0.783 31 H 0.136 0.864 32 H -0.186 1.186 33 H -0.182 1.182 34 H 0.112 0.888 35 H 0.114 0.886 36 H 0.238 0.762 37 H 0.136 0.864 38 H 0.111 0.889 39 H 0.160 0.840 40 H 0.152 0.848 41 H 0.150 0.850 42 H 0.152 0.848 43 H 0.159 0.841 44 H 0.118 0.882 45 H 0.129 0.871 46 H 0.147 0.853 47 H 0.146 0.854 48 H 0.147 0.853 49 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 2.779 0.074 -5.493 6.157 hybrid contribution -1.281 -0.614 -2.194 2.614 sum 1.498 -0.540 -7.687 7.851 Atomic orbital electron populations 1.86705 1.17562 1.79623 1.48668 1.24900 0.84011 1.10337 0.98232 0.95108 0.91442 0.74469 0.79962 1.19642 1.05545 0.90959 0.98436 1.18785 0.93222 0.90813 0.86633 1.86237 1.77605 1.16625 1.38448 1.22445 1.02602 0.81598 0.97302 1.20043 0.78971 0.82219 0.88418 1.90821 1.46677 1.60844 1.38966 1.45440 1.64881 1.06321 1.20055 1.21660 0.92514 0.93549 0.89234 0.86319 1.23307 0.97967 0.91000 1.04077 1.31844 1.10799 1.16880 1.11858 0.82724 1.05404 0.75084 0.76295 0.75175 1.93587 1.69332 1.43858 1.86298 1.93595 1.74194 1.85473 1.39356 1.30517 1.16131 1.12080 1.15857 1.20999 0.91099 0.94450 0.97593 1.21379 0.99596 0.99856 0.95027 1.21580 0.97212 0.93227 0.96248 1.21360 0.93470 1.00868 1.00212 1.20989 0.99868 0.92725 0.90949 1.23068 0.96389 0.95644 1.00428 1.21285 1.06563 1.00401 0.94826 1.21026 0.96236 0.94106 0.97687 1.21073 1.02653 0.94570 0.98563 1.21056 0.96506 0.99978 0.92551 0.78347 0.86393 1.18559 1.18163 0.88841 0.88644 0.76185 0.86422 0.88860 0.84028 0.84794 0.85018 0.84832 0.84124 0.88156 0.87068 0.85312 0.85360 0.85296 0.84739 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 40. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -1.89 12.88 -35.23 -0.45 -2.34 16 2 C -0.06 -0.12 2.38 36.00 0.09 -0.04 16 3 Si 0.69 0.00 30.25 -169.99 -5.14 -5.14 16 4 C -0.14 -0.18 5.27 -104.47 -0.55 -0.74 16 5 C 0.15 0.22 6.66 -39.21 -0.26 -0.04 16 6 O -0.28 -0.71 9.00 -39.35 -0.35 -1.06 16 7 C 0.04 -0.06 5.22 36.01 0.19 0.13 16 8 C 0.52 0.22 7.91 -10.98 -0.09 0.13 16 9 O -0.50 -2.82 16.12 -14.35 -0.23 -3.05 16 10 N -0.71 2.15 5.26 -53.02 -0.28 1.87 16 11 C 0.14 -0.31 4.30 -67.12 -0.29 -0.60 16 12 H 0.12 -0.09 7.50 -51.93 -0.39 -0.48 16 13 C -0.12 0.34 7.46 -25.78 -0.19 0.14 16 14 C -0.60 2.15 4.21 -25.78 -0.11 2.04 16 15 H 0.15 -0.96 8.14 -51.93 -0.42 -1.38 16 16 S 2.50 0.30 5.13 -107.50 -0.55 -0.26 16 17 O -0.93 -3.01 17.13 -57.54 -0.99 -4.00 16 18 O -0.93 -2.75 16.31 -57.54 -0.94 -3.69 16 19 C -0.66 -0.18 5.66 -39.58 -0.22 -0.41 16 20 C -0.02 0.00 9.47 -39.58 -0.37 -0.38 16 21 C -0.14 0.09 10.05 -39.58 -0.40 -0.30 16 22 C -0.06 0.07 10.05 -39.58 -0.40 -0.33 16 23 C -0.14 0.12 10.05 -39.58 -0.40 -0.27 16 24 C -0.03 0.00 9.47 -39.58 -0.37 -0.37 16 25 C -0.12 0.43 7.41 -25.92 -0.19 0.23 16 26 C -0.21 0.16 9.04 -39.43 -0.36 -0.19 16 27 C -0.07 0.09 10.04 -39.61 -0.40 -0.31 16 28 C -0.15 0.15 10.04 -39.56 -0.40 -0.25 16 29 C -0.08 0.02 8.66 -39.60 -0.34 -0.32 16 30 H 0.37 0.07 8.70 45.56 0.40 0.46 16 31 H 0.12 0.32 7.82 -51.93 -0.41 -0.08 16 32 H -0.26 -0.27 6.68 56.52 0.38 0.10 16 33 H -0.26 -0.89 7.11 56.52 0.40 -0.49 16 34 H 0.09 -0.37 7.65 -51.93 -0.40 -0.77 16 35 H 0.10 -0.41 7.67 -51.93 -0.40 -0.81 16 36 H 0.40 -2.55 8.70 -40.82 -0.36 -2.91 16 37 H 0.12 -0.31 7.44 -51.93 -0.39 -0.70 16 38 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 39 H 0.14 -0.16 7.56 -52.49 -0.40 -0.56 16 40 H 0.13 -0.35 8.06 -52.48 -0.42 -0.77 16 41 H 0.13 -0.43 8.06 -52.48 -0.42 -0.85 16 42 H 0.13 -0.40 8.06 -52.49 -0.42 -0.82 16 43 H 0.14 -0.22 7.57 -52.49 -0.40 -0.62 16 44 H 0.10 -0.52 8.14 -51.93 -0.42 -0.94 16 45 H 0.11 -0.45 8.10 -51.93 -0.42 -0.87 16 46 H 0.13 -0.43 6.30 -52.48 -0.33 -0.76 16 47 H 0.13 -0.43 8.06 -52.49 -0.42 -0.85 16 48 H 0.13 -0.36 8.06 -52.49 -0.42 -0.79 16 49 H 0.14 -0.21 4.86 -52.49 -0.26 -0.47 16 LS Contribution 423.80 15.07 6.39 6.39 Total: 0.00 -15.24 423.80 -13.96 -29.20 By element: Atomic # 1 Polarization: -9.72 SS G_CDS: -6.34 Total: -16.06 kcal Atomic # 6 Polarization: 3.20 SS G_CDS: -5.07 Total: -1.86 kcal Atomic # 7 Polarization: 2.15 SS G_CDS: -0.28 Total: 1.87 kcal Atomic # 8 Polarization: -11.17 SS G_CDS: -2.96 Total: -14.14 kcal Atomic # 14 Polarization: 0.00 SS G_CDS: -5.14 Total: -5.14 kcal Atomic # 16 Polarization: 0.30 SS G_CDS: -0.55 Total: -0.26 kcal Total LS contribution 6.39 Total: 6.39 kcal Total: -15.24 -13.96 -29.20 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12550010_2989392.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.671 kcal (2) G-P(sol) polarization free energy of solvation -15.239 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.911 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.958 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.197 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.868 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 4.14 seconds