Wall clock time and date at job start Sat Mar 6 2021 18:00:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.47323 * 2 1 4 4 C 1.50701 * 109.46912 * 120.00012 * 2 1 3 5 5 C 1.38267 * 119.94834 * 64.99593 * 4 2 1 6 6 C 1.38138 * 120.05831 * 180.02562 * 5 4 2 7 7 C 1.38729 * 119.94469 * 0.02562 * 6 5 4 8 8 O 1.35909 * 120.05529 * 180.02562 * 7 6 5 9 9 C 1.42903 * 116.99678 * 180.02562 * 8 7 6 10 10 F 1.39895 * 109.47788 * 59.99546 * 9 8 7 11 11 F 1.39902 * 109.46799 * 299.99332 * 9 8 7 12 12 C 1.50707 * 109.46632 * 179.97438 * 9 8 7 13 13 O 1.21281 * 119.99844 * 359.97438 * 12 9 8 14 14 N 1.34773 * 119.99600 * 179.97438 * 12 9 8 15 15 C 1.46503 * 119.99815 * 180.02562 * 14 12 9 16 16 H 1.08998 * 112.84889 * 23.79963 * 15 14 12 17 17 C 1.53778 * 113.61479 * 155.00030 * 15 14 12 18 18 C 1.53785 * 87.08312 * 89.19791 * 17 15 14 19 19 H 1.09000 * 113.61254 * 270.79763 * 18 17 15 20 20 S 1.81392 * 113.61363 * 139.97965 * 18 17 15 21 21 O 1.42100 * 110.54362 * 73.37719 * 20 18 17 22 22 O 1.42105 * 110.54626 * 296.62630 * 20 18 17 23 23 C 1.76195 * 104.45127 * 185.00162 * 20 18 17 24 24 C 1.38233 * 120.00186 * 89.99428 * 23 20 18 25 25 C 1.38234 * 120.00037 * 179.72636 * 24 23 20 26 26 C 1.38235 * 120.00220 * 0.28719 * 25 24 23 27 27 C 1.38237 * 119.99712 * 359.94731 * 26 25 24 28 28 C 1.38234 * 120.00048 * 0.02876 * 27 26 25 29 29 C 1.53782 * 113.68655 * 252.53463 * 15 14 12 30 30 C 1.38735 * 119.89039 * 0.27831 * 7 6 5 31 31 C 1.38147 * 119.93763 * 359.46672 * 30 7 6 32 32 H 0.96700 * 113.99357 * 60.00231 * 1 2 3 33 33 H 1.08995 * 109.47478 * 239.99416 * 2 1 3 34 34 H 1.48499 * 109.99987 * 59.99793 * 3 2 1 35 35 H 1.48497 * 110.00106 * 181.31469 * 3 2 1 36 36 H 1.08006 * 119.96561 * 359.97438 * 5 4 2 37 37 H 1.07997 * 120.02982 * 180.02562 * 6 5 4 38 38 H 0.97006 * 120.00307 * 359.97438 * 14 12 9 39 39 H 1.09006 * 113.61599 * 334.64871 * 17 15 14 40 40 H 1.08996 * 113.68988 * 203.76033 * 17 15 14 41 41 H 1.08002 * 120.00157 * 0.02562 * 24 23 20 42 42 H 1.07999 * 120.00009 * 180.25939 * 25 24 23 43 43 H 1.07996 * 120.00471 * 179.97438 * 26 25 24 44 44 H 1.08001 * 119.99657 * 180.02562 * 27 26 25 45 45 H 1.08004 * 119.99526 * 179.97438 * 28 27 26 46 46 H 1.09004 * 113.61071 * 156.32430 * 29 15 14 47 47 H 1.08993 * 113.61878 * 25.42288 * 29 15 14 48 48 H 1.08001 * 120.02775 * 179.72224 * 30 7 6 49 49 H 1.08000 * 119.96479 * 180.27794 * 31 30 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6839 -2.0605 1.3974 6 6 2.1428 -2.7139 2.5246 7 6 2.8520 -2.0142 3.4901 8 8 3.3050 -2.6548 4.5998 9 6 4.0272 -1.8712 5.5519 10 9 3.2095 -0.8379 6.0218 11 9 5.1626 -1.3268 4.9423 12 6 4.4461 -2.7443 6.7066 13 8 4.1545 -3.9216 6.7136 14 7 5.1448 -2.2169 7.7313 15 6 5.5526 -3.0658 8.8535 16 1 5.6144 -4.1206 8.5858 17 6 6.7923 -2.5461 9.6004 18 6 5.8247 -1.7473 10.4895 19 1 5.5960 -0.7539 10.1035 20 16 6.2933 -1.7313 12.2418 21 8 7.4177 -0.8876 12.4496 22 8 6.2542 -3.0457 12.7805 23 6 4.9671 -0.8933 13.0440 24 6 3.8838 -1.6089 13.5187 25 6 2.8460 -0.9521 14.1531 26 6 2.8887 0.4209 14.3076 27 6 3.9697 1.1371 13.8286 28 6 5.0078 0.4802 13.1946 29 6 4.7613 -2.8037 10.1458 30 6 3.0935 -0.6582 3.3234 31 6 2.6370 -0.0106 2.1917 32 1 -0.3932 0.4417 -0.7651 33 1 1.7924 -0.5139 -0.8899 34 1 1.5615 2.4679 1.2085 35 1 3.5346 1.7702 -0.0320 36 1 1.1307 -2.6045 0.6460 37 1 1.9497 -3.7685 2.6543 38 1 5.3784 -1.2754 7.7254 39 1 7.4404 -1.9195 8.9876 40 1 7.3380 -3.3225 10.1365 41 1 3.8505 -2.6816 13.3982 42 1 2.0016 -1.5116 14.5277 43 1 2.0777 0.9342 14.8028 44 1 4.0033 2.2097 13.9496 45 1 5.8522 1.0398 12.8200 46 1 4.7507 -3.6515 10.8309 47 1 3.7698 -2.3851 9.9735 48 1 3.6415 -0.1103 4.0757 49 1 2.8286 1.0440 2.0594 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12550010_4549640.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:00:21 Heat of formation + Delta-G solvation = -166.298314 kcal Electronic energy + Delta-G solvation = -40579.054977 eV Core-core repulsion = 34817.180708 eV Total energy + Delta-G solvation = -5761.874269 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 440.103 amu Computer time = 2.06 seconds Orbital eigenvalues (eV) -51.01901 -48.99109 -41.76143 -41.43163 -40.08295 -39.84582 -39.17213 -38.26483 -37.30713 -37.11756 -34.97298 -32.63726 -32.35443 -32.23394 -32.04213 -29.47709 -27.15312 -27.04934 -26.14738 -24.69904 -24.19353 -23.75906 -23.00142 -22.48950 -21.38431 -20.81883 -20.01984 -19.88716 -19.81529 -19.08171 -18.45015 -18.35683 -17.96074 -17.41020 -17.17013 -17.04358 -16.99620 -16.68165 -16.51216 -16.47172 -15.93588 -15.85697 -15.82514 -15.58737 -15.50348 -15.42320 -15.27389 -15.23489 -14.90801 -14.54782 -14.53816 -14.46082 -14.34888 -14.11787 -14.02880 -13.96250 -13.82849 -13.74136 -13.29092 -13.28354 -13.25921 -13.16413 -12.60502 -12.29497 -12.26261 -12.21301 -12.14043 -12.00371 -11.82786 -11.73970 -11.32077 -10.67576 -10.40317 -10.36323 -10.31755 -10.08675 -9.70417 -4.96804 -1.05037 -0.21943 -0.12658 -0.01563 0.25445 0.31272 0.49805 1.28079 1.53815 1.62083 1.72270 1.86942 1.94361 2.29613 2.38485 2.61643 2.66724 2.83274 2.98144 3.08522 3.27252 3.29257 3.35885 3.40998 3.50979 3.73766 3.82088 3.83051 3.90731 3.93026 4.06144 4.08070 4.23956 4.29735 4.31792 4.34248 4.42366 4.44562 4.45512 4.47110 4.66917 4.66973 4.70572 4.74905 4.76786 4.87370 4.90975 5.03201 5.04876 5.20380 5.23112 5.24920 5.35519 5.67127 5.71940 5.81935 6.32511 6.91021 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.074 4.074 3 Si 0.769 3.231 4 C -0.109 4.109 5 C -0.054 4.054 6 C -0.129 4.129 7 C 0.087 3.913 8 O -0.300 6.300 9 C 0.431 3.569 10 F -0.173 7.173 11 F -0.172 7.172 12 C 0.524 3.476 13 O -0.497 6.497 14 N -0.670 5.670 15 C 0.126 3.874 16 H 0.121 0.879 17 C -0.116 4.116 18 C -0.584 4.584 19 H 0.186 0.814 20 S 2.504 3.496 21 O -0.971 6.971 22 O -0.962 6.962 23 C -0.667 4.667 24 C -0.039 4.039 25 C -0.149 4.149 26 C -0.071 4.071 27 C -0.148 4.148 28 C -0.043 4.043 29 C -0.125 4.125 30 C -0.194 4.194 31 C -0.100 4.100 32 H 0.405 0.595 33 H 0.102 0.898 34 H -0.297 1.297 35 H -0.289 1.289 36 H 0.163 0.837 37 H 0.156 0.844 38 H 0.425 0.575 39 H 0.122 0.878 40 H 0.124 0.876 41 H 0.149 0.851 42 H 0.152 0.848 43 H 0.153 0.847 44 H 0.152 0.848 45 H 0.148 0.852 46 H 0.126 0.874 47 H 0.104 0.896 48 H 0.139 0.861 49 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.189 4.668 -4.903 7.483 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.184 4.184 3 Si 0.676 3.324 4 C -0.110 4.110 5 C -0.071 4.071 6 C -0.148 4.148 7 C 0.044 3.956 8 O -0.217 6.217 9 C 0.354 3.646 10 F -0.154 7.154 11 F -0.153 7.153 12 C 0.302 3.698 13 O -0.369 6.369 14 N -0.324 5.324 15 C 0.020 3.980 16 H 0.139 0.861 17 C -0.155 4.155 18 C -0.697 4.697 19 H 0.204 0.796 20 S 2.689 3.311 21 O -0.969 6.969 22 O -0.959 6.959 23 C -0.755 4.755 24 C -0.058 4.058 25 C -0.167 4.167 26 C -0.089 4.089 27 C -0.167 4.167 28 C -0.062 4.062 29 C -0.164 4.164 30 C -0.212 4.212 31 C -0.118 4.118 32 H 0.256 0.744 33 H 0.120 0.880 34 H -0.225 1.225 35 H -0.216 1.216 36 H 0.181 0.819 37 H 0.174 0.826 38 H 0.264 0.736 39 H 0.141 0.859 40 H 0.142 0.858 41 H 0.167 0.833 42 H 0.169 0.831 43 H 0.171 0.829 44 H 0.170 0.830 45 H 0.166 0.834 46 H 0.144 0.856 47 H 0.122 0.878 48 H 0.157 0.843 49 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -2.093 3.616 -3.441 5.412 hybrid contribution -0.352 0.945 0.400 1.085 sum -2.445 4.560 -3.041 6.002 Atomic orbital electron populations 1.86442 1.16946 1.82402 1.51517 1.24728 0.86068 1.10666 0.96912 0.94386 0.77416 0.75807 0.84792 1.19795 0.99647 0.94977 0.96542 1.21176 0.96061 0.93374 0.96535 1.20828 0.99297 1.01898 0.92745 1.19169 0.97720 0.91785 0.86877 1.86644 1.68379 1.36955 1.29704 1.21870 0.76520 0.79612 0.86633 1.93196 1.73163 1.60561 1.88473 1.93201 1.51273 1.86532 1.84311 1.19240 0.80554 0.87363 0.82618 1.90875 1.53206 1.15539 1.77325 1.45353 1.53553 1.14838 1.18644 1.21949 0.95353 0.96391 0.84260 0.86074 1.23257 0.95588 0.99936 0.96752 1.31745 1.08640 1.10049 1.19229 0.79615 1.05061 0.74225 0.73571 0.78227 1.93538 1.49375 1.68386 1.85563 1.93547 1.86722 1.38479 1.77147 1.30460 1.18730 1.06014 1.20272 1.21224 0.91166 1.00731 0.92671 1.21685 0.99715 0.95414 0.99903 1.21917 0.97887 0.94566 0.94512 1.21676 0.94140 1.01853 0.99018 1.21227 0.98261 0.92312 0.94386 1.23352 0.98123 0.97459 0.97469 1.21508 1.05452 0.93321 1.00925 1.20853 0.98220 0.99264 0.93450 0.74362 0.88037 1.22520 1.21631 0.81946 0.82650 0.73618 0.85924 0.85753 0.83302 0.83071 0.82917 0.83045 0.83423 0.85616 0.87785 0.84322 0.85619 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.01 12.81 -148.98 -1.91 -0.89 16 2 C -0.07 0.14 2.79 71.24 0.20 0.34 16 3 Si 0.77 -2.09 29.85 68.60 2.05 -0.05 16 4 C -0.11 -0.46 5.38 -19.85 -0.11 -0.56 16 5 C -0.05 -0.15 9.68 22.25 0.22 0.06 16 6 C -0.13 -0.63 9.99 22.36 0.22 -0.40 16 7 C 0.09 0.68 6.48 22.51 0.15 0.83 16 8 O -0.30 -2.57 9.60 -73.48 -0.71 -3.28 16 9 C 0.43 1.68 2.05 71.24 0.15 1.82 16 10 F -0.17 -0.48 15.28 44.97 0.69 0.21 16 11 F -0.17 -0.45 15.31 44.97 0.69 0.24 16 12 C 0.52 1.27 7.34 87.66 0.64 1.91 16 13 O -0.50 -4.60 16.10 16.01 0.26 -4.34 16 14 N -0.67 3.62 5.27 -440.03 -2.32 1.30 16 15 C 0.13 -0.81 4.32 45.52 0.20 -0.62 16 16 H 0.12 -0.55 7.46 -2.39 -0.02 -0.57 16 17 C -0.12 1.08 7.42 31.12 0.23 1.31 16 18 C -0.58 4.91 4.20 31.12 0.13 5.04 16 19 H 0.19 -2.65 8.14 -2.39 -0.02 -2.67 16 20 S 2.50 0.92 5.08 -56.49 -0.29 0.63 16 21 O -0.97 -7.10 17.13 -127.65 -2.19 -9.29 16 22 O -0.96 -5.86 16.44 -127.65 -2.10 -7.96 16 23 C -0.67 -0.57 5.66 22.27 0.13 -0.44 16 24 C -0.04 0.00 9.47 22.27 0.21 0.21 16 25 C -0.15 0.26 10.05 22.27 0.22 0.48 16 26 C -0.07 0.19 10.05 22.27 0.22 0.41 16 27 C -0.15 0.27 10.05 22.27 0.22 0.49 16 28 C -0.04 -0.01 9.47 22.27 0.21 0.20 16 29 C -0.12 0.95 7.44 31.12 0.23 1.18 16 30 C -0.19 -1.36 8.26 22.37 0.18 -1.18 16 31 C -0.10 -0.63 8.66 22.25 0.19 -0.44 16 32 H 0.40 -5.00 8.74 -74.06 -0.65 -5.65 16 33 H 0.10 -0.68 7.96 -2.39 -0.02 -0.70 16 34 H -0.30 -1.46 7.04 99.48 0.70 -0.76 16 35 H -0.29 -0.84 7.11 99.48 0.71 -0.13 16 36 H 0.16 -0.32 8.06 -2.91 -0.02 -0.34 16 37 H 0.16 0.23 8.06 -2.91 -0.02 0.21 16 38 H 0.43 -4.64 8.70 -92.70 -0.81 -5.44 16 39 H 0.12 -1.56 8.14 -2.38 -0.02 -1.58 16 40 H 0.12 -1.26 8.10 -2.39 -0.02 -1.27 16 41 H 0.15 -0.37 7.57 -2.91 -0.02 -0.39 16 42 H 0.15 -0.92 8.06 -2.91 -0.02 -0.95 16 43 H 0.15 -1.16 8.06 -2.91 -0.02 -1.18 16 44 H 0.15 -0.95 8.06 -2.91 -0.02 -0.98 16 45 H 0.15 -0.34 7.58 -2.91 -0.02 -0.36 16 46 H 0.13 -0.99 7.53 -2.39 -0.02 -1.01 16 47 H 0.10 -0.89 8.14 -2.39 -0.02 -0.91 16 48 H 0.14 0.70 5.10 -2.91 -0.01 0.68 16 49 H 0.13 0.64 4.86 -2.91 -0.01 0.62 16 Total: 0.00 -33.81 434.10 -2.34 -36.15 By element: Atomic # 1 Polarization: -23.01 SS G_CDS: -0.37 Total: -23.38 kcal Atomic # 6 Polarization: 6.79 SS G_CDS: 3.85 Total: 10.65 kcal Atomic # 7 Polarization: 3.62 SS G_CDS: -2.32 Total: 1.30 kcal Atomic # 8 Polarization: -19.11 SS G_CDS: -6.64 Total: -25.75 kcal Atomic # 9 Polarization: -0.93 SS G_CDS: 1.38 Total: 0.45 kcal Atomic # 14 Polarization: -2.09 SS G_CDS: 2.05 Total: -0.05 kcal Atomic # 16 Polarization: 0.92 SS G_CDS: -0.29 Total: 0.63 kcal Total: -33.81 -2.34 -36.15 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12550010_4549640.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -130.145 kcal (2) G-P(sol) polarization free energy of solvation -33.812 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -163.957 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.341 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.153 kcal (6) G-S(sol) free energy of system = (1) + (5) -166.298 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.06 seconds