Wall clock time and date at job start Sat Mar 6 2021 18:01:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86298 * 109.46982 * 2 1 4 4 C 1.50697 * 109.46936 * 120.00126 * 2 1 3 5 5 C 1.38240 * 119.93893 * 245.02095 * 4 2 1 6 6 C 1.38244 * 120.04216 * 179.97438 * 5 4 2 7 7 Br 1.89103 * 120.03229 * 180.02562 * 6 5 4 8 8 C 1.38781 * 119.93175 * 0.02562 * 6 5 4 9 9 O 1.35922 * 120.06228 * 179.97438 * 8 6 5 10 10 C 1.42901 * 117.00179 * 180.02562 * 9 8 6 11 11 C 1.50699 * 109.47017 * 179.97438 * 10 9 8 12 12 O 1.21279 * 120.00211 * 0.02562 * 11 10 9 13 13 N 1.34777 * 119.99701 * 180.02562 * 11 10 9 14 14 C 1.46499 * 119.99842 * 180.02562 * 13 11 10 15 15 H 1.09004 * 112.84865 * 25.32661 * 14 13 11 16 16 C 1.53779 * 113.61466 * 156.52915 * 14 13 11 17 17 C 1.53780 * 87.08104 * 89.11488 * 16 14 13 18 18 H 1.09001 * 113.61098 * 270.88056 * 17 16 14 19 19 S 1.81407 * 113.61264 * 140.06585 * 17 16 14 20 20 O 1.42104 * 110.53911 * 296.62330 * 19 17 16 21 21 O 1.42099 * 110.54158 * 73.37433 * 19 17 16 22 22 C 1.76203 * 104.44865 * 185.00024 * 19 17 16 23 23 C 1.38234 * 119.99524 * 269.72986 * 22 19 17 24 24 C 1.38241 * 119.99371 * 179.76761 * 23 22 19 25 25 C 1.38232 * 120.00328 * 0.50099 * 24 23 22 26 26 C 1.38241 * 119.99754 * 359.75002 * 25 24 23 27 27 C 1.38227 * 119.99765 * 359.97438 * 26 25 24 28 28 C 1.53779 * 113.61625 * 254.13649 * 14 13 11 29 29 C 1.38729 * 119.88115 * 359.72290 * 8 6 5 30 30 C 1.38140 * 119.95126 * 0.55361 * 29 8 6 31 31 H 0.96689 * 114.00306 * 299.99910 * 1 2 3 32 32 H 1.09001 * 109.46867 * 240.00194 * 2 1 3 33 33 H 1.48500 * 109.99717 * 178.67616 * 3 2 1 34 34 H 1.48492 * 110.00142 * 300.00029 * 3 2 1 35 35 H 1.07994 * 119.97980 * 359.96024 * 5 4 2 36 36 H 1.08997 * 109.47239 * 300.00135 * 10 9 8 37 37 H 1.09002 * 109.46852 * 59.99551 * 10 9 8 38 38 H 0.96997 * 120.00269 * 359.97438 * 13 11 10 39 39 H 1.09007 * 113.61247 * 203.66564 * 16 14 13 40 40 H 1.09000 * 113.61409 * 334.47809 * 16 14 13 41 41 H 1.07994 * 120.00602 * 359.97438 * 23 22 19 42 42 H 1.08006 * 119.99817 * 180.22765 * 24 23 22 43 43 H 1.07995 * 119.99974 * 179.72425 * 25 24 23 44 44 H 1.08001 * 119.99852 * 179.97438 * 26 25 24 45 45 H 1.08008 * 119.99777 * 179.97438 * 27 26 25 46 46 H 1.09005 * 113.61070 * 25.42680 * 28 14 13 47 47 H 1.08998 * 113.62257 * 156.33334 * 28 14 13 48 48 H 1.08000 * 120.02092 * 180.29270 * 29 8 6 49 49 H 1.08002 * 119.96623 * 179.72855 * 30 29 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6382 -0.0110 2.1907 6 6 3.0995 -0.6605 3.3205 7 35 4.0658 0.2968 4.6343 8 6 2.8527 -2.0156 3.4896 9 8 3.3055 -2.6570 4.5992 10 6 3.0149 -4.0520 4.7061 11 6 3.5918 -4.5882 5.9910 12 8 4.1921 -3.8484 6.7415 13 7 3.4405 -5.8898 6.3061 14 6 4.0007 -6.4109 7.5554 15 1 4.1133 -5.6435 8.3214 16 6 3.3036 -7.6859 8.0586 17 6 4.3145 -8.4780 7.2126 18 1 3.9834 -8.6554 6.1894 19 16 4.9237 -9.9805 8.0264 20 8 5.6424 -9.6514 9.2074 21 8 3.9184 -10.9847 8.0364 22 6 6.1528 -10.6068 6.9301 23 6 5.8015 -11.5019 5.9370 24 6 6.7650 -11.9895 5.0739 25 6 8.0812 -11.5901 5.2104 26 6 8.4333 -10.6989 6.2068 27 6 7.4690 -10.2069 7.0663 28 6 5.2601 -7.2702 7.3547 29 6 2.1385 -2.7135 2.5265 30 6 1.6847 -2.0609 1.3967 31 1 -0.3933 0.4416 0.7649 32 1 1.7923 -0.5138 -0.8900 33 1 3.5346 1.7702 0.0322 34 1 1.5615 2.4679 -1.2084 35 1 2.8304 1.0434 2.0581 36 1 1.9350 -4.1996 4.7028 37 1 3.4565 -4.5809 3.8614 38 1 2.9600 -6.4814 5.7061 39 1 3.4103 -7.8476 9.1313 40 1 2.2735 -7.7845 7.7161 41 1 4.7740 -11.8176 5.8333 42 1 6.4900 -12.6861 4.2956 43 1 8.8346 -11.9745 4.5388 44 1 9.4618 -10.3871 6.3138 45 1 7.7441 -9.5110 7.8451 46 1 5.8090 -7.0341 6.4429 47 1 5.9009 -7.3184 8.2351 48 1 1.9410 -3.7671 2.6581 49 1 1.1324 -2.6050 0.6447 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12550010_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:01:19 Heat of formation + Delta-G solvation = -65.254158 kcal Electronic energy + Delta-G solvation = -36496.798135 eV Core-core repulsion = 31338.395418 eV Total energy + Delta-G solvation = -5158.402717 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 482.032 amu Computer time = 3.07 seconds Orbital eigenvalues (eV) -41.89425 -41.26919 -40.19026 -39.81744 -38.92211 -38.15940 -37.31540 -37.01152 -34.67734 -33.54480 -32.45105 -32.25912 -32.14633 -30.61896 -29.78853 -27.31774 -27.04766 -26.35619 -24.35206 -24.13625 -23.85709 -22.66010 -22.09042 -21.27413 -20.02923 -19.68925 -19.23161 -18.73684 -18.28207 -18.04186 -17.68172 -17.27720 -17.20117 -17.07904 -16.90268 -16.60824 -16.13838 -16.04021 -15.81462 -15.73976 -15.62970 -15.56760 -15.05748 -14.81237 -14.65741 -14.40022 -14.36959 -14.29092 -14.16423 -14.09370 -13.94880 -13.79180 -13.54534 -13.34914 -13.15162 -13.04992 -12.54565 -12.44651 -12.38670 -12.37287 -12.24016 -12.21493 -11.90525 -11.86546 -11.85165 -11.37116 -11.12180 -11.07319 -10.55631 -10.50757 -10.42675 -10.17040 -10.07828 -9.38760 -5.11223 -1.08371 -0.28463 -0.13057 -0.02736 0.16913 0.65018 1.14554 1.19185 1.27824 1.56242 1.69039 1.90436 2.24265 2.28114 2.29812 2.55761 2.72442 2.90658 3.18249 3.24717 3.29483 3.33850 3.39556 3.49769 3.56200 3.61776 3.69422 3.71636 3.76742 3.77807 3.88139 3.93937 4.14224 4.17334 4.19525 4.20236 4.25439 4.31319 4.34502 4.40920 4.48365 4.54237 4.55283 4.62337 4.66812 4.79085 4.88550 4.93965 5.11023 5.14166 5.17015 5.24600 5.30464 5.69847 5.87582 6.11699 6.46078 6.88893 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.060 4.060 3 Si 0.677 3.323 4 C -0.151 4.151 5 C -0.048 4.048 6 C -0.119 4.119 7 Br -0.022 7.022 8 C 0.161 3.839 9 O -0.273 6.273 10 C 0.038 3.962 11 C 0.519 3.481 12 O -0.499 6.499 13 N -0.712 5.712 14 C 0.137 3.863 15 H 0.120 0.880 16 C -0.117 4.117 17 C -0.604 4.604 18 H 0.155 0.845 19 S 2.499 3.501 20 O -0.929 6.929 21 O -0.934 6.934 22 C -0.659 4.659 23 C -0.026 4.026 24 C -0.140 4.140 25 C -0.064 4.064 26 C -0.140 4.140 27 C -0.023 4.023 28 C -0.124 4.124 29 C -0.204 4.204 30 C -0.035 4.035 31 H 0.380 0.620 32 H 0.116 0.884 33 H -0.253 1.253 34 H -0.250 1.250 35 H 0.143 0.857 36 H 0.099 0.901 37 H 0.098 0.902 38 H 0.404 0.596 39 H 0.112 0.888 40 H 0.100 0.900 41 H 0.141 0.859 42 H 0.134 0.866 43 H 0.132 0.868 44 H 0.134 0.866 45 H 0.142 0.858 46 H 0.093 0.907 47 H 0.117 0.883 48 H 0.139 0.861 49 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.115 -1.459 -4.490 5.173 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.171 4.171 3 Si 0.578 3.422 4 C -0.153 4.153 5 C -0.067 4.067 6 C -0.199 4.199 7 Br 0.063 6.937 8 C 0.112 3.888 9 O -0.185 6.185 10 C -0.041 4.041 11 C 0.304 3.696 12 O -0.371 6.371 13 N -0.366 5.366 14 C 0.031 3.969 15 H 0.137 0.863 16 C -0.156 4.156 17 C -0.714 4.714 18 H 0.173 0.827 19 S 2.680 3.320 20 O -0.926 6.926 21 O -0.931 6.931 22 C -0.746 4.746 23 C -0.045 4.045 24 C -0.159 4.159 25 C -0.082 4.082 26 C -0.158 4.158 27 C -0.041 4.041 28 C -0.163 4.163 29 C -0.224 4.224 30 C -0.053 4.053 31 H 0.228 0.772 32 H 0.134 0.866 33 H -0.178 1.178 34 H -0.175 1.175 35 H 0.160 0.840 36 H 0.117 0.883 37 H 0.115 0.885 38 H 0.239 0.761 39 H 0.131 0.869 40 H 0.118 0.882 41 H 0.159 0.841 42 H 0.152 0.848 43 H 0.150 0.850 44 H 0.152 0.848 45 H 0.160 0.840 46 H 0.112 0.888 47 H 0.135 0.865 48 H 0.157 0.843 49 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -0.857 -0.539 -3.472 3.616 hybrid contribution -0.040 -1.441 -1.855 2.349 sum -0.897 -1.980 -5.326 5.753 Atomic orbital electron populations 1.86509 1.16921 1.81662 1.49358 1.24932 0.85318 1.09917 0.96964 0.94818 0.81564 0.78100 0.87701 1.20258 1.02204 0.95092 0.97702 1.20837 0.95272 0.99469 0.91150 1.20999 1.08145 0.92431 0.98339 1.96825 1.72327 1.72759 1.51764 1.18618 0.93054 0.90731 0.86361 1.86279 1.72881 1.21290 1.38041 1.22526 1.02080 0.81998 0.97517 1.19960 0.80405 0.82090 0.87169 1.90828 1.39262 1.56704 1.50356 1.45431 1.58497 1.09455 1.23237 1.21666 0.92832 0.95480 0.86945 0.86254 1.23081 0.98780 0.93552 1.00214 1.31845 1.09337 1.16775 1.13428 0.82698 1.05413 0.74877 0.76267 0.75437 1.93597 1.71808 1.84846 1.42345 1.93587 1.58643 1.54544 1.86322 1.30502 1.12844 1.13722 1.17490 1.20988 1.00580 0.91945 0.91005 1.21364 0.93335 1.01057 1.00143 1.21580 0.96524 0.94018 0.96124 1.21378 1.00124 0.98421 0.95914 1.20994 0.91005 0.95834 0.96316 1.23298 0.96509 0.91151 1.05347 1.21283 1.04183 1.00956 0.95942 1.20949 0.94958 0.93417 0.96022 0.77223 0.86634 1.17791 1.17464 0.84016 0.88283 0.88454 0.76138 0.86936 0.88170 0.84127 0.84834 0.85017 0.84787 0.84040 0.88834 0.86515 0.84328 0.84502 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.56 12.83 -35.23 -0.45 0.11 16 2 C -0.06 0.08 2.80 36.00 0.10 0.19 16 3 Si 0.68 -1.00 29.80 -169.99 -5.07 -6.07 16 4 C -0.15 0.16 5.35 -104.60 -0.56 -0.40 16 5 C -0.05 0.02 8.40 -39.58 -0.33 -0.32 16 6 C -0.12 -0.15 6.24 -39.38 -0.25 -0.40 16 7 Br -0.02 -0.06 33.16 -68.01 -2.26 -2.31 16 8 C 0.16 0.09 6.68 -39.20 -0.26 -0.17 16 9 O -0.27 -0.36 9.01 -39.41 -0.35 -0.71 16 10 C 0.04 -0.10 5.22 36.01 0.19 0.08 16 11 C 0.52 -0.33 7.91 -10.99 -0.09 -0.42 16 12 O -0.50 -2.22 16.12 -14.35 -0.23 -2.45 16 13 N -0.71 2.72 5.26 -53.02 -0.28 2.44 16 14 C 0.14 -0.40 4.29 -67.12 -0.29 -0.69 16 15 H 0.12 -0.17 7.50 -51.93 -0.39 -0.56 16 16 C -0.12 0.48 7.41 -25.92 -0.19 0.29 16 17 C -0.60 2.42 4.21 -25.78 -0.11 2.32 16 18 H 0.16 -1.03 8.14 -51.93 -0.42 -1.46 16 19 S 2.50 -0.46 5.09 -107.50 -0.55 -1.01 16 20 O -0.93 -2.44 16.46 -57.54 -0.95 -3.38 16 21 O -0.93 -2.80 17.12 -57.54 -0.98 -3.79 16 22 C -0.66 0.01 5.66 -39.59 -0.22 -0.21 16 23 C -0.03 0.01 9.47 -39.58 -0.37 -0.37 16 24 C -0.14 0.15 10.05 -39.58 -0.40 -0.24 16 25 C -0.06 0.08 10.05 -39.58 -0.40 -0.31 16 26 C -0.14 0.13 10.05 -39.58 -0.40 -0.27 16 27 C -0.02 0.01 9.47 -39.59 -0.37 -0.37 16 28 C -0.12 0.42 7.46 -25.78 -0.19 0.22 16 29 C -0.20 0.36 9.04 -39.44 -0.36 0.01 16 30 C -0.03 0.05 9.68 -39.60 -0.38 -0.33 16 31 H 0.38 -1.78 8.70 45.56 0.40 -1.38 16 32 H 0.12 -0.15 7.96 -51.93 -0.41 -0.57 16 33 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 34 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 35 H 0.14 -0.25 4.90 -52.49 -0.26 -0.50 16 36 H 0.10 -0.54 7.65 -51.93 -0.40 -0.94 16 37 H 0.10 -0.53 7.67 -51.93 -0.40 -0.93 16 38 H 0.40 -2.86 8.70 -40.82 -0.36 -3.22 16 39 H 0.11 -0.49 8.10 -51.93 -0.42 -0.92 16 40 H 0.10 -0.57 8.14 -51.93 -0.42 -0.99 16 41 H 0.14 -0.25 7.56 -52.49 -0.40 -0.64 16 42 H 0.13 -0.42 8.06 -52.48 -0.42 -0.84 16 43 H 0.13 -0.45 8.06 -52.49 -0.42 -0.88 16 44 H 0.13 -0.39 8.06 -52.49 -0.42 -0.81 16 45 H 0.14 -0.22 7.57 -52.48 -0.40 -0.62 16 46 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 47 H 0.12 -0.39 7.55 -51.93 -0.39 -0.78 16 48 H 0.14 -0.65 6.30 -52.49 -0.33 -0.98 16 49 H 0.14 -0.38 8.06 -52.49 -0.42 -0.80 16 LS Contribution 445.32 15.07 6.71 6.71 Total: 0.00 -15.10 445.32 -15.20 -30.30 By element: Atomic # 1 Polarization: -12.54 SS G_CDS: -5.91 Total: -18.45 kcal Atomic # 6 Polarization: 3.49 SS G_CDS: -4.89 Total: -1.40 kcal Atomic # 7 Polarization: 2.72 SS G_CDS: -0.28 Total: 2.44 kcal Atomic # 8 Polarization: -7.25 SS G_CDS: -2.97 Total: -10.22 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -5.07 Total: -6.07 kcal Atomic # 16 Polarization: -0.46 SS G_CDS: -0.55 Total: -1.01 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.26 Total: -2.31 kcal Total LS contribution 6.71 Total: 6.71 kcal Total: -15.10 -15.20 -30.30 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12550010_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.953 kcal (2) G-P(sol) polarization free energy of solvation -15.099 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.053 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -15.201 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.301 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.254 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.07 seconds