Wall clock time and date at job start Sat Mar 6 2021 18:01:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86298 * 109.46982 * 2 1 4 4 C 1.50697 * 109.46936 * 120.00126 * 2 1 3 5 5 C 1.38240 * 119.93893 * 245.02095 * 4 2 1 6 6 C 1.38244 * 120.04216 * 179.97438 * 5 4 2 7 7 Br 1.89103 * 120.03229 * 180.02562 * 6 5 4 8 8 C 1.38781 * 119.93175 * 0.02562 * 6 5 4 9 9 O 1.35922 * 120.06228 * 179.97438 * 8 6 5 10 10 C 1.42901 * 117.00179 * 180.02562 * 9 8 6 11 11 C 1.50699 * 109.47017 * 179.97438 * 10 9 8 12 12 O 1.21279 * 120.00211 * 0.02562 * 11 10 9 13 13 N 1.34777 * 119.99701 * 180.02562 * 11 10 9 14 14 C 1.46499 * 119.99842 * 180.02562 * 13 11 10 15 15 H 1.09004 * 112.84865 * 25.32661 * 14 13 11 16 16 C 1.53779 * 113.61466 * 156.52915 * 14 13 11 17 17 C 1.53780 * 87.08104 * 89.11488 * 16 14 13 18 18 H 1.09001 * 113.61098 * 270.88056 * 17 16 14 19 19 S 1.81407 * 113.61264 * 140.06585 * 17 16 14 20 20 O 1.42104 * 110.53911 * 296.62330 * 19 17 16 21 21 O 1.42099 * 110.54158 * 73.37433 * 19 17 16 22 22 C 1.76203 * 104.44865 * 185.00024 * 19 17 16 23 23 C 1.38234 * 119.99524 * 269.72986 * 22 19 17 24 24 C 1.38241 * 119.99371 * 179.76761 * 23 22 19 25 25 C 1.38232 * 120.00328 * 0.50099 * 24 23 22 26 26 C 1.38241 * 119.99754 * 359.75002 * 25 24 23 27 27 C 1.38227 * 119.99765 * 359.97438 * 26 25 24 28 28 C 1.53779 * 113.61625 * 254.13649 * 14 13 11 29 29 C 1.38729 * 119.88115 * 359.72290 * 8 6 5 30 30 C 1.38140 * 119.95126 * 0.55361 * 29 8 6 31 31 H 0.96689 * 114.00306 * 299.99910 * 1 2 3 32 32 H 1.09001 * 109.46867 * 240.00194 * 2 1 3 33 33 H 1.48500 * 109.99717 * 178.67616 * 3 2 1 34 34 H 1.48492 * 110.00142 * 300.00029 * 3 2 1 35 35 H 1.07994 * 119.97980 * 359.96024 * 5 4 2 36 36 H 1.08997 * 109.47239 * 300.00135 * 10 9 8 37 37 H 1.09002 * 109.46852 * 59.99551 * 10 9 8 38 38 H 0.96997 * 120.00269 * 359.97438 * 13 11 10 39 39 H 1.09007 * 113.61247 * 203.66564 * 16 14 13 40 40 H 1.09000 * 113.61409 * 334.47809 * 16 14 13 41 41 H 1.07994 * 120.00602 * 359.97438 * 23 22 19 42 42 H 1.08006 * 119.99817 * 180.22765 * 24 23 22 43 43 H 1.07995 * 119.99974 * 179.72425 * 25 24 23 44 44 H 1.08001 * 119.99852 * 179.97438 * 26 25 24 45 45 H 1.08008 * 119.99777 * 179.97438 * 27 26 25 46 46 H 1.09005 * 113.61070 * 25.42680 * 28 14 13 47 47 H 1.08998 * 113.62257 * 156.33334 * 28 14 13 48 48 H 1.08000 * 120.02092 * 180.29270 * 29 8 6 49 49 H 1.08002 * 119.96623 * 179.72855 * 30 29 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6382 -0.0110 2.1907 6 6 3.0995 -0.6605 3.3205 7 35 4.0658 0.2968 4.6343 8 6 2.8527 -2.0156 3.4896 9 8 3.3055 -2.6570 4.5992 10 6 3.0149 -4.0520 4.7061 11 6 3.5918 -4.5882 5.9910 12 8 4.1921 -3.8484 6.7415 13 7 3.4405 -5.8898 6.3061 14 6 4.0007 -6.4109 7.5554 15 1 4.1133 -5.6435 8.3214 16 6 3.3036 -7.6859 8.0586 17 6 4.3145 -8.4780 7.2126 18 1 3.9834 -8.6554 6.1894 19 16 4.9237 -9.9805 8.0264 20 8 5.6424 -9.6514 9.2074 21 8 3.9184 -10.9847 8.0364 22 6 6.1528 -10.6068 6.9301 23 6 5.8015 -11.5019 5.9370 24 6 6.7650 -11.9895 5.0739 25 6 8.0812 -11.5901 5.2104 26 6 8.4333 -10.6989 6.2068 27 6 7.4690 -10.2069 7.0663 28 6 5.2601 -7.2702 7.3547 29 6 2.1385 -2.7135 2.5265 30 6 1.6847 -2.0609 1.3967 31 1 -0.3933 0.4416 0.7649 32 1 1.7923 -0.5138 -0.8900 33 1 3.5346 1.7702 0.0322 34 1 1.5615 2.4679 -1.2084 35 1 2.8304 1.0434 2.0581 36 1 1.9350 -4.1996 4.7028 37 1 3.4565 -4.5809 3.8614 38 1 2.9600 -6.4814 5.7061 39 1 3.4103 -7.8476 9.1313 40 1 2.2735 -7.7845 7.7161 41 1 4.7740 -11.8176 5.8333 42 1 6.4900 -12.6861 4.2956 43 1 8.8346 -11.9745 4.5388 44 1 9.4618 -10.3871 6.3138 45 1 7.7441 -9.5110 7.8451 46 1 5.8090 -7.0341 6.4429 47 1 5.9009 -7.3184 8.2351 48 1 1.9410 -3.7671 2.6581 49 1 1.1324 -2.6050 0.6447 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12550010_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:01:18 Heat of formation + Delta-G solvation = -70.337503 kcal Electronic energy + Delta-G solvation = -36497.018565 eV Core-core repulsion = 31338.395418 eV Total energy + Delta-G solvation = -5158.623148 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 482.032 amu Computer time = 1.76 seconds Orbital eigenvalues (eV) -41.76182 -41.11798 -40.06283 -39.68031 -38.84083 -38.22547 -37.19742 -37.08783 -34.55097 -33.48199 -32.33175 -32.12757 -32.02287 -30.53282 -29.64859 -27.04801 -26.86891 -26.21127 -24.23606 -24.00795 -23.73573 -22.54614 -21.92603 -21.11202 -19.94217 -19.53659 -19.12850 -18.61830 -18.16537 -17.91454 -17.49446 -17.17858 -17.04660 -16.96194 -16.80744 -16.49445 -15.99861 -15.88780 -15.71456 -15.62571 -15.53996 -15.47256 -14.90077 -14.76339 -14.51909 -14.29211 -14.26349 -14.13370 -14.03477 -13.94540 -13.77314 -13.67225 -13.43186 -13.26144 -13.25617 -13.13533 -12.40620 -12.28095 -12.24276 -12.19774 -12.13198 -12.01770 -11.87490 -11.85071 -11.76685 -11.25775 -11.19151 -11.03662 -10.45371 -10.38794 -10.25389 -10.06763 -9.98924 -9.31249 -5.03228 -1.00984 -0.19912 -0.02731 0.08957 0.27311 0.64888 1.28725 1.35286 1.41097 1.59656 1.76530 1.93410 2.40440 2.41155 2.45410 2.71731 2.89149 3.07115 3.34478 3.43620 3.49715 3.53123 3.57864 3.79560 3.80101 3.82842 3.88047 3.92882 4.03891 4.07870 4.08030 4.09754 4.34826 4.36145 4.39703 4.44488 4.45604 4.48738 4.54662 4.63875 4.68852 4.70902 4.79343 4.81551 4.86941 4.93082 5.03769 5.06031 5.25098 5.31003 5.36942 5.37357 5.47038 5.83880 6.05439 6.41449 6.77528 7.10642 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.052 4.052 3 Si 0.741 3.259 4 C -0.152 4.152 5 C -0.054 4.054 6 C -0.140 4.140 7 Br -0.049 7.049 8 C 0.151 3.849 9 O -0.304 6.304 10 C 0.032 3.968 11 C 0.517 3.483 12 O -0.562 6.562 13 N -0.692 5.692 14 C 0.132 3.868 15 H 0.099 0.901 16 C -0.118 4.118 17 C -0.572 4.572 18 H 0.192 0.808 19 S 2.497 3.503 20 O -0.968 6.968 21 O -0.972 6.972 22 C -0.666 4.666 23 C -0.041 4.041 24 C -0.147 4.147 25 C -0.071 4.071 26 C -0.149 4.149 27 C -0.041 4.041 28 C -0.127 4.127 29 C -0.194 4.194 30 C -0.034 4.034 31 H 0.396 0.604 32 H 0.118 0.882 33 H -0.289 1.289 34 H -0.293 1.293 35 H 0.147 0.853 36 H 0.133 0.867 37 H 0.130 0.870 38 H 0.424 0.576 39 H 0.111 0.889 40 H 0.125 0.875 41 H 0.150 0.850 42 H 0.154 0.846 43 H 0.153 0.847 44 H 0.150 0.850 45 H 0.145 0.855 46 H 0.101 0.899 47 H 0.111 0.889 48 H 0.174 0.826 49 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.544 -2.993 -6.584 8.054 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.164 4.164 3 Si 0.649 3.351 4 C -0.154 4.154 5 C -0.073 4.073 6 C -0.220 4.220 7 Br 0.036 6.964 8 C 0.103 3.897 9 O -0.216 6.216 10 C -0.046 4.046 11 C 0.303 3.697 12 O -0.439 6.439 13 N -0.347 5.347 14 C 0.025 3.975 15 H 0.118 0.882 16 C -0.157 4.157 17 C -0.685 4.685 18 H 0.209 0.791 19 S 2.683 3.317 20 O -0.965 6.965 21 O -0.969 6.969 22 C -0.753 4.753 23 C -0.060 4.060 24 C -0.165 4.165 25 C -0.089 4.089 26 C -0.168 4.168 27 C -0.060 4.060 28 C -0.167 4.167 29 C -0.213 4.213 30 C -0.053 4.053 31 H 0.246 0.754 32 H 0.136 0.864 33 H -0.216 1.216 34 H -0.221 1.221 35 H 0.164 0.836 36 H 0.150 0.850 37 H 0.148 0.852 38 H 0.263 0.737 39 H 0.129 0.871 40 H 0.143 0.857 41 H 0.168 0.832 42 H 0.171 0.829 43 H 0.171 0.829 44 H 0.167 0.833 45 H 0.163 0.837 46 H 0.120 0.880 47 H 0.129 0.871 48 H 0.191 0.809 49 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges -2.315 -2.156 -5.540 6.380 hybrid contribution 0.411 -0.953 -1.269 1.639 sum -1.905 -3.109 -6.808 7.723 Atomic orbital electron populations 1.86476 1.16798 1.81979 1.50600 1.24818 0.85405 1.09203 0.96965 0.94016 0.78470 0.77101 0.85540 1.20292 1.02063 0.95630 0.97374 1.20910 0.95500 0.99875 0.91036 1.21142 1.09243 0.93167 0.98471 1.96782 1.73125 1.73415 1.53056 1.18784 0.93570 0.90550 0.86844 1.86242 1.73431 1.23369 1.38563 1.22848 1.04149 0.80467 0.97096 1.20474 0.79438 0.82398 0.87386 1.90809 1.42251 1.58370 1.52427 1.45264 1.57593 1.08859 1.22972 1.21607 0.93513 0.95277 0.87112 0.88248 1.23215 0.99982 0.92125 1.00401 1.31711 1.08990 1.13046 1.14782 0.79071 1.05233 0.74190 0.76984 0.75281 1.93542 1.72553 1.85521 1.44925 1.93533 1.59437 1.56918 1.87016 1.30442 1.12882 1.14376 1.17623 1.21235 1.01437 0.92105 0.91237 1.21685 0.93337 1.01117 1.00376 1.21911 0.97089 0.93645 0.96213 1.21668 1.00809 0.98451 0.95846 1.21190 0.91334 0.96504 0.96936 1.23353 0.96616 0.91064 1.05644 1.21607 1.02593 1.02405 0.94709 1.21218 0.94515 0.93115 0.96418 0.75411 0.86431 1.21594 1.22086 0.83573 0.84981 0.85198 0.73748 0.87063 0.85690 0.83222 0.82859 0.82896 0.83256 0.83746 0.88032 0.87086 0.80859 0.82744 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.95 12.83 -148.98 -1.91 0.03 16 2 C -0.05 0.20 2.80 71.24 0.20 0.39 16 3 Si 0.74 -1.75 29.80 68.60 2.04 0.29 16 4 C -0.15 0.49 5.35 -19.85 -0.11 0.39 16 5 C -0.05 0.03 8.40 22.27 0.19 0.22 16 6 C -0.14 -0.40 6.24 22.40 0.14 -0.26 16 7 Br -0.05 -0.32 33.16 -20.37 -0.68 -1.00 16 8 C 0.15 0.03 6.68 22.52 0.15 0.18 16 9 O -0.30 -0.63 9.01 -73.64 -0.66 -1.30 16 10 C 0.03 -0.25 5.22 71.24 0.37 0.12 16 11 C 0.52 -1.04 7.91 87.66 0.69 -0.35 16 12 O -0.56 -5.72 16.12 16.01 0.26 -5.46 16 13 N -0.69 6.50 5.26 -440.04 -2.32 4.18 16 14 C 0.13 -0.83 4.29 45.52 0.20 -0.64 16 15 H 0.10 -0.15 7.50 -2.38 -0.02 -0.17 16 16 C -0.12 1.10 7.41 31.12 0.23 1.33 16 17 C -0.57 5.20 4.21 31.21 0.13 5.33 16 18 H 0.19 -3.14 8.14 -2.39 -0.02 -3.16 16 19 S 2.50 1.06 5.09 -56.49 -0.29 0.77 16 20 O -0.97 -6.97 16.46 -127.65 -2.10 -9.07 16 21 O -0.97 -6.72 17.12 -127.65 -2.19 -8.90 16 22 C -0.67 -0.31 5.66 22.27 0.13 -0.18 16 23 C -0.04 0.04 9.47 22.27 0.21 0.25 16 24 C -0.15 0.44 10.05 22.27 0.22 0.67 16 25 C -0.07 0.25 10.05 22.27 0.22 0.47 16 26 C -0.15 0.29 10.05 22.27 0.22 0.52 16 27 C -0.04 -0.01 9.47 22.27 0.21 0.20 16 28 C -0.13 0.88 7.46 31.21 0.23 1.11 16 29 C -0.19 1.23 9.04 22.36 0.20 1.43 16 30 C -0.03 0.19 9.68 22.26 0.22 0.41 16 31 H 0.40 -4.28 8.70 -74.06 -0.64 -4.93 16 32 H 0.12 -0.45 7.96 -2.39 -0.02 -0.47 16 33 H -0.29 -1.00 7.11 99.48 0.71 -0.29 16 34 H -0.29 -1.42 7.11 99.48 0.71 -0.71 16 35 H 0.15 -0.40 4.90 -2.91 -0.01 -0.42 16 36 H 0.13 -1.94 7.65 -2.39 -0.02 -1.96 16 37 H 0.13 -1.89 7.67 -2.39 -0.02 -1.91 16 38 H 0.42 -7.46 8.70 -92.71 -0.81 -8.27 16 39 H 0.11 -0.95 8.10 -2.38 -0.02 -0.97 16 40 H 0.12 -1.74 8.14 -2.39 -0.02 -1.76 16 41 H 0.15 -0.55 7.56 -2.91 -0.02 -0.58 16 42 H 0.15 -1.19 8.06 -2.91 -0.02 -1.22 16 43 H 0.15 -1.29 8.06 -2.91 -0.02 -1.31 16 44 H 0.15 -0.90 8.06 -2.91 -0.02 -0.93 16 45 H 0.14 -0.22 7.57 -2.91 -0.02 -0.24 16 46 H 0.10 -0.83 8.14 -2.38 -0.02 -0.85 16 47 H 0.11 -0.60 7.55 -2.39 -0.02 -0.62 16 48 H 0.17 -2.44 6.30 -2.91 -0.02 -2.46 16 49 H 0.15 -1.39 8.06 -2.91 -0.02 -1.41 16 Total: 0.00 -39.33 445.32 -4.15 -43.49 By element: Atomic # 1 Polarization: -34.25 SS G_CDS: -0.38 Total: -34.63 kcal Atomic # 6 Polarization: 7.53 SS G_CDS: 4.06 Total: 11.59 kcal Atomic # 7 Polarization: 6.50 SS G_CDS: -2.32 Total: 4.18 kcal Atomic # 8 Polarization: -18.09 SS G_CDS: -6.60 Total: -24.69 kcal Atomic # 14 Polarization: -1.75 SS G_CDS: 2.04 Total: 0.29 kcal Atomic # 16 Polarization: 1.06 SS G_CDS: -0.29 Total: 0.77 kcal Atomic # 35 Polarization: -0.32 SS G_CDS: -0.68 Total: -1.00 kcal Total: -39.33 -4.15 -43.49 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12550010_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.851 kcal (2) G-P(sol) polarization free energy of solvation -39.333 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.184 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.153 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.486 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.338 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.76 seconds