Wall clock time and date at job start Sat Mar 6 2021 18:01:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86296 * 109.47409 * 2 1 4 4 C 1.50702 * 109.47363 * 120.00094 * 2 1 3 5 5 C 1.35447 * 125.56255 * 244.96034 * 4 2 1 6 6 C 1.39838 * 107.86376 * 179.77262 * 5 4 2 7 7 C 1.37875 * 107.08393 * 0.41669 * 6 5 4 8 8 C 1.46680 * 126.23070 * 179.84477 * 7 6 5 9 9 O 1.21690 * 120.00475 * 359.69480 * 8 7 6 10 10 N 1.34780 * 119.99739 * 179.68753 * 8 7 6 11 11 C 1.46493 * 119.99849 * 180.02562 * 10 8 7 12 12 H 1.09007 * 112.85347 * 336.19748 * 11 10 8 13 13 C 1.53958 * 113.53601 * 107.51146 * 11 10 8 14 14 C 1.53777 * 87.02253 * 89.18822 * 13 11 10 15 15 H 1.08997 * 113.61245 * 270.77660 * 14 13 11 16 16 S 1.81395 * 113.61696 * 139.95028 * 14 13 11 17 17 O 1.42105 * 110.54530 * 192.48804 * 16 14 13 18 18 O 1.42101 * 110.54333 * 329.23976 * 16 14 13 19 19 C 1.76198 * 104.44778 * 80.86439 * 16 14 13 20 20 C 1.38241 * 119.99959 * 269.72671 * 19 16 14 21 21 C 1.38230 * 120.00018 * 179.80927 * 20 19 16 22 22 C 1.38242 * 119.99878 * 0.39918 * 21 20 19 23 23 C 1.38225 * 120.00037 * 359.85625 * 22 21 20 24 24 C 1.38235 * 120.00275 * 90.00186 * 19 16 14 25 25 C 1.53783 * 113.61358 * 205.00447 * 11 10 8 26 26 N 1.35536 * 125.56336 * 64.99794 * 4 2 1 27 27 H 0.96700 * 113.99985 * 299.99624 * 1 2 3 28 28 H 1.09005 * 109.47270 * 240.00132 * 2 1 3 29 29 H 1.48507 * 109.99908 * 300.00113 * 3 2 1 30 30 H 1.48496 * 110.00155 * 61.31541 * 3 2 1 31 31 H 1.07997 * 126.07100 * 0.02562 * 5 4 2 32 32 H 1.08005 * 126.46037 * 180.29800 * 6 5 4 33 33 H 0.97002 * 120.00211 * 0.02562 * 10 8 7 34 34 H 1.08998 * 113.66458 * 334.65853 * 13 11 10 35 35 H 1.09005 * 113.60807 * 203.70732 * 13 11 10 36 36 H 1.08001 * 119.99521 * 359.97438 * 20 19 16 37 37 H 1.08003 * 120.00384 * 180.22765 * 21 20 19 38 38 H 1.08000 * 119.99647 * 179.83478 * 22 21 20 39 39 H 1.08010 * 120.00091 * 179.97438 * 23 22 21 40 40 H 1.08001 * 119.99937 * 359.97438 * 24 19 16 41 41 H 1.09004 * 113.61892 * 156.33925 * 25 11 10 42 42 H 1.08995 * 113.61642 * 25.43164 * 25 11 10 43 43 H 0.97003 * 125.67537 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6336 -0.1395 2.2381 6 6 2.9036 -1.1299 3.1877 7 6 2.3540 -2.3034 2.7165 8 6 2.3951 -3.6091 3.3835 9 8 2.9594 -3.7275 4.4552 10 7 1.8078 -4.6778 2.8095 11 6 1.8484 -5.9817 3.4759 12 1 2.6835 -6.0767 4.1700 13 6 0.4951 -6.4098 4.0721 14 6 0.1908 -7.0568 2.7107 15 1 -0.2927 -6.3816 2.0047 16 16 -0.6479 -8.6601 2.8392 17 8 -0.6413 -9.3284 1.5851 18 8 -0.2593 -9.3321 4.0295 19 6 -2.3410 -8.2506 3.1044 20 6 -2.8216 -8.0973 4.3915 21 6 -4.1489 -7.7722 4.5995 22 6 -4.9976 -7.6084 3.5206 23 6 -4.5183 -7.7668 2.2339 24 6 -3.1900 -8.0881 2.0257 25 6 1.7113 -7.1712 2.5109 26 7 1.7548 -2.0251 1.5090 27 1 -0.3933 0.4417 0.7651 28 1 1.7923 -0.5138 -0.8900 29 1 1.5615 2.4679 -1.2085 30 1 1.5879 2.4585 1.2241 31 1 2.9288 0.8975 2.2996 32 1 3.4428 -1.0006 4.1145 33 1 1.3583 -4.5835 1.9551 34 1 -0.1605 -5.5734 4.3143 35 1 0.5847 -7.1285 4.8868 36 1 -2.1594 -8.2290 5.2344 37 1 -4.5236 -7.6488 5.6049 38 1 -6.0353 -7.3569 3.6832 39 1 -5.1815 -7.6392 1.3910 40 1 -2.8155 -8.2118 1.0203 41 1 2.1339 -8.0985 2.8979 42 1 2.0361 -6.9487 1.4945 43 1 1.2845 -2.6635 0.9503 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12550010_6580494.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:01:33 Heat of formation + Delta-G solvation = -23.248975 kcal Electronic energy + Delta-G solvation = -29628.004025 eV Core-core repulsion = 25348.260833 eV Total energy + Delta-G solvation = -4279.743192 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.102 amu Computer time = 2.79 seconds Orbital eigenvalues (eV) -42.64208 -41.17841 -40.18587 -39.25853 -38.15778 -37.95411 -37.00452 -34.67047 -32.44813 -32.23511 -32.14304 -31.46549 -27.80020 -27.28714 -26.41130 -24.31931 -23.85732 -23.56289 -21.81911 -21.35266 -21.06514 -20.11048 -19.97943 -19.12443 -18.44880 -17.98465 -17.28787 -17.10542 -16.98550 -16.81568 -16.46734 -16.12442 -15.95047 -15.68211 -15.53340 -15.30919 -15.13400 -14.67785 -14.65274 -14.52499 -14.33725 -14.16706 -14.04835 -13.93803 -13.89216 -13.67442 -13.34531 -13.14065 -13.04255 -12.43914 -12.39116 -12.38009 -12.23721 -11.97517 -11.86349 -11.38649 -11.32267 -10.96546 -10.50291 -10.41375 -10.16948 -10.16744 -9.37703 -5.03803 -1.07614 -0.28111 0.17213 0.24450 1.03557 1.46054 1.53114 1.68180 1.74100 1.80166 2.04957 2.23843 2.30606 2.56338 2.73633 2.91126 3.11654 3.26393 3.30250 3.44442 3.49654 3.64262 3.72158 3.78096 3.88349 4.12776 4.15628 4.18118 4.18585 4.19824 4.26320 4.31827 4.35850 4.43357 4.55531 4.56481 4.65378 4.79373 4.91350 4.94290 4.99819 5.11256 5.18187 5.24809 5.49193 5.70146 5.73094 6.07306 6.14468 6.26331 6.96205 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.062 4.062 3 Si 0.719 3.281 4 C 0.026 3.974 5 C -0.199 4.199 6 C -0.094 4.094 7 C -0.053 4.053 8 C 0.595 3.405 9 O -0.517 6.517 10 N -0.717 5.717 11 C 0.137 3.863 12 H 0.122 0.878 13 C -0.124 4.124 14 C -0.605 4.605 15 H 0.153 0.847 16 S 2.501 3.499 17 O -0.934 6.934 18 O -0.928 6.928 19 C -0.659 4.659 20 C -0.023 4.023 21 C -0.140 4.140 22 C -0.065 4.065 23 C -0.140 4.140 24 C -0.027 4.027 25 C -0.117 4.117 26 N -0.524 5.524 27 H 0.380 0.620 28 H 0.120 0.880 29 H -0.255 1.255 30 H -0.254 1.254 31 H 0.152 0.848 32 H 0.154 0.846 33 H 0.396 0.604 34 H 0.092 0.908 35 H 0.118 0.882 36 H 0.142 0.858 37 H 0.134 0.866 38 H 0.132 0.868 39 H 0.134 0.866 40 H 0.141 0.859 41 H 0.112 0.888 42 H 0.098 0.902 43 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.997 4.353 -2.480 5.108 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.171 4.171 3 Si 0.617 3.383 4 C -0.092 4.092 5 C -0.223 4.223 6 C -0.121 4.121 7 C -0.166 4.166 8 C 0.383 3.617 9 O -0.392 6.392 10 N -0.368 5.368 11 C 0.030 3.970 12 H 0.140 0.860 13 C -0.164 4.164 14 C -0.714 4.714 15 H 0.171 0.829 16 S 2.682 3.318 17 O -0.931 6.931 18 O -0.925 6.925 19 C -0.746 4.746 20 C -0.041 4.041 21 C -0.159 4.159 22 C -0.083 4.083 23 C -0.159 4.159 24 C -0.045 4.045 25 C -0.157 4.157 26 N -0.121 5.121 27 H 0.229 0.771 28 H 0.138 0.862 29 H -0.180 1.180 30 H -0.179 1.179 31 H 0.169 0.831 32 H 0.172 0.828 33 H 0.230 0.770 34 H 0.111 0.889 35 H 0.136 0.864 36 H 0.160 0.840 37 H 0.152 0.848 38 H 0.150 0.850 39 H 0.152 0.848 40 H 0.158 0.842 41 H 0.130 0.870 42 H 0.117 0.883 43 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -0.458 3.806 -2.367 4.506 hybrid contribution -2.358 0.134 -0.269 2.377 sum -2.815 3.940 -2.635 5.513 Atomic orbital electron populations 1.86599 1.17550 1.80235 1.49685 1.24914 0.84059 1.11935 0.96239 0.94194 0.91405 0.72056 0.80600 1.21109 1.04459 0.84192 0.99447 1.20754 1.05970 1.00405 0.95220 1.21358 1.00612 0.89995 1.00124 1.20393 1.10186 0.95710 0.90351 1.17041 0.78101 0.82033 0.84557 1.90891 1.43460 1.84163 1.20666 1.45529 1.58075 1.08577 1.24623 1.21717 0.98938 0.81449 0.94913 0.86037 1.23289 0.98448 1.01739 0.92880 1.31790 1.08923 1.22404 1.08311 0.82948 1.05377 0.74714 0.76895 0.74856 1.93588 1.85946 1.70229 1.43312 1.93594 1.81978 1.69522 1.47453 1.30515 1.24636 1.19218 1.00220 1.20999 0.96510 0.91484 0.95146 1.21380 0.93788 1.00904 0.99780 1.21580 1.00056 0.93819 0.92806 1.21362 0.95815 1.01034 0.97699 1.20989 0.93684 0.91839 0.98032 1.23086 0.89395 1.00488 1.02684 1.41951 1.43147 1.09373 1.17635 0.77128 0.86249 1.18011 1.17864 0.83077 0.82834 0.77031 0.88907 0.86377 0.84006 0.84774 0.85008 0.84836 0.84154 0.86966 0.88325 0.74680 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 37. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.63 12.88 -35.23 -0.45 0.17 16 2 C -0.06 0.16 3.08 36.01 0.11 0.27 16 3 Si 0.72 -2.05 30.56 -169.99 -5.19 -7.24 16 4 C 0.03 -0.04 6.46 -81.95 -0.53 -0.57 16 5 C -0.20 0.19 9.32 -39.98 -0.37 -0.18 16 6 C -0.09 -0.06 10.65 -39.12 -0.42 -0.48 16 7 C -0.05 -0.01 7.06 -81.98 -0.58 -0.59 16 8 C 0.59 0.66 7.79 -12.85 -0.10 0.56 16 9 O -0.52 -2.52 16.48 5.20 0.09 -2.43 16 10 N -0.72 1.54 5.26 -54.23 -0.29 1.26 16 11 C 0.14 -0.28 4.33 -67.03 -0.29 -0.57 16 12 H 0.12 -0.11 7.46 -51.93 -0.39 -0.49 16 13 C -0.12 0.33 7.45 -25.83 -0.19 0.14 16 14 C -0.60 1.99 4.19 -25.92 -0.11 1.88 16 15 H 0.15 -0.87 8.14 -51.93 -0.42 -1.29 16 16 S 2.50 0.51 5.12 -107.50 -0.55 -0.04 16 17 O -0.93 -3.16 17.13 -57.54 -0.99 -4.14 16 18 O -0.93 -2.68 16.34 -57.54 -0.94 -3.62 16 19 C -0.66 -0.26 5.66 -39.58 -0.22 -0.49 16 20 C -0.02 0.00 9.47 -39.58 -0.37 -0.38 16 21 C -0.14 0.08 10.05 -39.58 -0.40 -0.31 16 22 C -0.06 0.06 10.05 -39.58 -0.40 -0.34 16 23 C -0.14 0.09 10.05 -39.59 -0.40 -0.31 16 24 C -0.03 0.00 9.47 -39.58 -0.37 -0.38 16 25 C -0.12 0.40 7.42 -25.91 -0.19 0.20 16 26 N -0.52 1.07 5.99 -5.69 -0.03 1.04 16 27 H 0.38 -1.35 8.70 45.56 0.40 -0.95 16 28 H 0.12 -0.42 7.96 -51.93 -0.41 -0.83 16 29 H -0.26 -0.11 7.11 56.52 0.40 0.29 16 30 H -0.25 0.19 7.11 56.52 0.40 0.59 16 31 H 0.15 -0.40 6.19 -52.49 -0.32 -0.73 16 32 H 0.15 0.07 8.06 -52.48 -0.42 -0.36 16 33 H 0.40 -1.91 7.83 -40.82 -0.32 -2.23 16 34 H 0.09 -0.26 8.14 -51.93 -0.42 -0.69 16 35 H 0.12 -0.34 7.46 -51.93 -0.39 -0.72 16 36 H 0.14 -0.18 7.56 -52.49 -0.40 -0.57 16 37 H 0.13 -0.35 8.06 -52.48 -0.42 -0.77 16 38 H 0.13 -0.41 8.06 -52.49 -0.42 -0.83 16 39 H 0.13 -0.36 8.06 -52.48 -0.42 -0.79 16 40 H 0.14 -0.18 7.57 -52.49 -0.40 -0.58 16 41 H 0.11 -0.44 8.10 -51.93 -0.42 -0.86 16 42 H 0.10 -0.46 8.14 -51.93 -0.42 -0.88 16 43 H 0.42 -1.84 8.19 -40.82 -0.33 -2.18 16 LS Contribution 380.14 15.07 5.73 5.73 Total: 0.00 -13.09 380.14 -12.61 -25.70 By element: Atomic # 1 Polarization: -9.73 SS G_CDS: -5.14 Total: -14.87 kcal Atomic # 6 Polarization: 3.29 SS G_CDS: -4.84 Total: -1.54 kcal Atomic # 7 Polarization: 2.62 SS G_CDS: -0.32 Total: 2.30 kcal Atomic # 8 Polarization: -7.73 SS G_CDS: -2.29 Total: -10.03 kcal Atomic # 14 Polarization: -2.05 SS G_CDS: -5.19 Total: -7.24 kcal Atomic # 16 Polarization: 0.51 SS G_CDS: -0.55 Total: -0.04 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -13.09 -12.61 -25.70 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12550010_6580494.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.447 kcal (2) G-P(sol) polarization free energy of solvation -13.088 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.641 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.608 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.696 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.249 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.79 seconds