Wall clock time and date at job start Sat Mar 6 2021 18:01:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.33807 * 122.45182 * 2 1 4 4 C 1.50703 * 124.52530 * 359.97438 * 3 2 1 5 5 O 1.42898 * 109.47473 * 113.45794 * 4 3 2 6 6 Si 1.86300 * 109.46754 * 233.45568 * 4 3 2 7 7 S 1.70622 * 110.95517 * 180.23971 * 3 2 1 8 8 C 1.75828 * 91.56093 * 359.65498 * 7 3 2 9 9 C 1.46585 * 125.45997 * 180.02562 * 8 7 3 10 10 O 1.21697 * 120.00020 * 180.32261 * 9 8 7 11 11 N 1.34785 * 119.99541 * 0.32686 * 9 8 7 12 12 C 1.46504 * 119.99431 * 179.97438 * 11 9 8 13 13 H 1.09001 * 112.85123 * 336.19595 * 12 11 9 14 14 C 1.53784 * 113.61324 * 107.50174 * 12 11 9 15 15 C 1.53775 * 87.08040 * 89.11039 * 14 12 11 16 16 H 1.08998 * 113.62033 * 270.88051 * 15 14 12 17 17 S 1.81405 * 113.61248 * 139.98090 * 15 14 12 18 18 O 1.42101 * 110.54208 * 194.12707 * 17 15 14 19 19 O 1.42100 * 110.54284 * 330.87740 * 17 15 14 20 20 C 1.76199 * 104.44815 * 82.50525 * 17 15 14 21 21 C 1.38236 * 119.99791 * 269.72312 * 20 17 15 22 22 C 1.38233 * 120.00035 * 179.81079 * 21 20 17 23 23 C 1.38239 * 119.99717 * 0.40169 * 22 21 20 24 24 C 1.38228 * 120.00187 * 359.85499 * 23 22 21 25 25 C 1.38231 * 120.00163 * 90.00403 * 20 17 15 26 26 C 1.53779 * 87.08355 * 25.43365 * 15 14 12 27 27 C 1.36650 * 109.08497 * 0.33738 * 8 7 3 28 28 H 1.09006 * 109.46409 * 85.00991 * 1 2 3 29 29 H 1.08998 * 109.47510 * 205.01178 * 1 2 3 30 30 H 1.09003 * 109.47208 * 325.01973 * 1 2 3 31 31 H 1.09001 * 109.46912 * 353.45009 * 4 3 2 32 32 H 0.96694 * 113.99806 * 180.02562 * 5 4 3 33 33 H 1.48511 * 109.99884 * 178.67541 * 6 4 3 34 34 H 1.48497 * 110.00252 * 299.99501 * 6 4 3 35 35 H 0.96998 * 120.00090 * 359.97438 * 11 9 8 36 36 H 1.08995 * 113.61442 * 203.66343 * 14 12 11 37 37 H 1.08999 * 113.61361 * 334.56705 * 14 12 11 38 38 H 1.08002 * 119.99929 * 0.02562 * 21 20 17 39 39 H 1.08004 * 120.00272 * 180.23048 * 22 21 20 40 40 H 1.07999 * 119.99958 * 179.83567 * 23 22 21 41 41 H 1.07998 * 120.00047 * 179.97438 * 24 23 22 42 42 H 1.08003 * 120.00326 * 359.97438 * 25 20 17 43 43 H 1.09002 * 113.61664 * 220.01826 * 26 15 14 44 44 H 1.08993 * 113.61396 * 89.11398 * 26 15 14 45 45 H 1.07996 * 123.34942 * 179.77889 * 27 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1291 0.0000 4 6 1.6356 2.5161 -0.0006 5 8 1.9424 3.1646 1.2353 6 14 2.3559 3.4963 -1.4117 7 16 3.8970 0.7891 -0.0067 8 6 3.5936 -0.9428 0.0011 9 6 4.6230 -1.9865 0.0006 10 8 4.2999 -3.1598 0.0004 11 7 5.9273 -1.6465 0.0004 12 6 6.9560 -2.6896 0.0004 13 1 6.5990 -3.6362 0.4060 14 6 7.6901 -2.8308 -1.3435 15 6 8.6822 -1.7776 -0.8226 16 1 8.3887 -0.7523 -1.0477 17 16 10.4085 -2.1290 -1.2551 18 8 11.2894 -1.3205 -0.4871 19 8 10.6173 -3.5294 -1.3758 20 6 10.5825 -1.5202 -2.8994 21 6 10.3310 -2.3520 -3.9745 22 6 10.4636 -1.8734 -5.2645 23 6 10.8558 -0.5654 -5.4795 24 6 11.1125 0.2648 -4.4045 25 6 10.9760 -0.2127 -3.1144 26 6 8.2979 -2.2312 0.5956 27 6 2.2445 -1.1602 0.0007 28 1 -0.3632 0.0894 -1.0239 29 1 -0.3634 -0.9312 0.4345 30 1 -0.3634 0.8420 0.5892 31 1 0.5539 2.4511 -0.1182 32 1 1.5930 4.0635 1.3051 33 1 1.7590 4.8558 -1.4426 34 1 3.8303 3.5922 -1.2631 35 1 6.1847 -0.7113 0.0002 36 1 8.1365 -3.8134 -1.4960 37 1 7.1043 -2.4935 -2.1986 38 1 10.0275 -3.3748 -3.8066 39 1 10.2635 -2.5221 -6.1045 40 1 10.9621 -0.1921 -6.4874 41 1 11.4193 1.2866 -4.5725 42 1 11.1765 0.4360 -2.2745 43 1 8.2027 -1.4100 1.3060 44 1 8.9104 -3.0499 0.9731 45 1 1.8019 -2.1452 0.0013 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12550010_6739946.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:01:47 Heat of formation + Delta-G solvation = -39.504791 kcal Electronic energy + Delta-G solvation = -31300.117837 eV Core-core repulsion = 26890.484137 eV Total energy + Delta-G solvation = -4409.633700 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.079 amu Computer time = 3.93 seconds Orbital eigenvalues (eV) -41.44359 -40.14637 -40.07759 -39.15304 -38.10923 -37.72184 -36.95478 -34.53953 -32.50777 -32.39856 -32.10146 -30.04723 -27.83687 -27.21756 -26.13158 -24.39922 -24.13914 -23.81144 -22.09336 -21.21547 -20.03010 -19.94521 -19.44785 -18.97500 -18.69425 -18.06185 -17.56653 -17.06436 -17.01762 -16.93745 -16.32795 -16.19787 -15.93369 -15.75333 -15.62407 -15.33150 -15.11120 -14.73715 -14.61148 -14.53296 -14.30519 -14.11925 -14.07346 -13.95950 -13.87292 -13.43988 -13.30327 -13.24872 -13.10266 -13.04874 -12.99096 -12.76097 -12.34392 -12.32230 -12.29538 -12.16140 -11.91813 -11.81422 -11.29704 -11.17875 -10.86968 -10.45795 -10.34200 -10.12573 -9.73991 -9.48674 -5.18439 -1.02276 -0.68284 -0.23788 0.21371 0.28519 0.72784 0.98120 1.19901 1.36982 1.73486 1.74049 1.84550 2.08243 2.34909 2.61519 2.79910 2.96765 3.00500 3.32270 3.36027 3.55684 3.58803 3.64507 3.76829 3.82232 3.92157 4.02806 4.07489 4.22096 4.23887 4.25490 4.30732 4.32715 4.39344 4.40575 4.49862 4.59632 4.61901 4.63032 4.68307 4.80005 4.83548 4.91478 4.98641 5.15220 5.20384 5.26222 5.28682 5.32257 5.74255 6.19000 6.22543 6.99346 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C -0.098 4.098 3 C -0.184 4.184 4 C -0.044 4.044 5 O -0.533 6.533 6 Si 0.668 3.332 7 S 0.209 5.791 8 C -0.268 4.268 9 C 0.599 3.401 10 O -0.519 6.519 11 N -0.712 5.712 12 C 0.136 3.864 13 H 0.122 0.878 14 C -0.124 4.124 15 C -0.605 4.605 16 H 0.154 0.846 17 S 2.501 3.499 18 O -0.934 6.934 19 O -0.929 6.929 20 C -0.659 4.659 21 C -0.022 4.022 22 C -0.140 4.140 23 C -0.065 4.065 24 C -0.140 4.140 25 C -0.026 4.026 26 C -0.118 4.118 27 C -0.042 4.042 28 H 0.077 0.923 29 H 0.073 0.927 30 H 0.070 0.930 31 H 0.090 0.910 32 H 0.384 0.616 33 H -0.244 1.244 34 H -0.240 1.240 35 H 0.400 0.600 36 H 0.119 0.881 37 H 0.094 0.906 38 H 0.142 0.858 39 H 0.134 0.866 40 H 0.132 0.868 41 H 0.134 0.866 42 H 0.141 0.859 43 H 0.099 0.901 44 H 0.112 0.888 45 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.678 4.940 -4.271 8.033 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C -0.111 4.111 3 C -0.303 4.303 4 C -0.155 4.155 5 O -0.341 6.341 6 Si 0.566 3.434 7 S 0.479 5.521 8 C -0.389 4.389 9 C 0.385 3.615 10 O -0.395 6.395 11 N -0.364 5.364 12 C 0.029 3.971 13 H 0.139 0.861 14 C -0.163 4.163 15 C -0.715 4.715 16 H 0.172 0.828 17 S 2.681 3.319 18 O -0.931 6.931 19 O -0.926 6.926 20 C -0.745 4.745 21 C -0.041 4.041 22 C -0.159 4.159 23 C -0.083 4.083 24 C -0.159 4.159 25 C -0.045 4.045 26 C -0.157 4.157 27 C -0.075 4.075 28 H 0.096 0.904 29 H 0.092 0.908 30 H 0.088 0.912 31 H 0.108 0.892 32 H 0.233 0.767 33 H -0.168 1.168 34 H -0.163 1.163 35 H 0.235 0.765 36 H 0.137 0.863 37 H 0.112 0.888 38 H 0.160 0.840 39 H 0.152 0.848 40 H 0.150 0.850 41 H 0.151 0.849 42 H 0.159 0.841 43 H 0.118 0.882 44 H 0.130 0.870 45 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -2.145 4.773 -3.913 6.534 hybrid contribution -1.880 0.959 0.260 2.126 sum -4.025 5.732 -3.653 7.900 Atomic orbital electron populations 1.20609 0.88892 1.03438 1.02891 1.18667 0.98198 0.90649 1.03574 1.23184 0.98314 0.98138 1.10711 1.24174 1.03169 0.92753 0.95399 1.86613 1.80216 1.32593 1.34687 0.94778 0.81774 0.81520 0.85338 1.83000 1.03741 0.97561 1.67820 1.24495 0.98015 0.97089 1.19277 1.16898 0.81331 0.87486 0.75760 1.90869 1.81449 1.18081 1.49148 1.45499 1.05062 1.09685 1.76140 1.21688 0.86593 0.92805 0.95972 0.86064 1.23264 0.95736 0.97898 0.99449 1.31804 1.22275 1.09949 1.07446 0.82769 1.05383 0.77014 0.74995 0.74483 1.93586 1.60296 1.70214 1.68983 1.93591 1.83908 1.29358 1.85747 1.30514 1.17200 1.04342 1.22491 1.20996 0.92413 0.98833 0.91880 1.21373 1.00962 0.96269 0.97259 1.21572 0.93410 0.93690 0.99602 1.21356 1.01334 1.00677 0.92537 1.20993 0.91991 0.93091 0.98436 1.23089 0.97105 1.03032 0.92491 1.20661 0.90800 1.00010 0.96048 0.90420 0.90840 0.91160 0.89224 0.76692 1.16778 1.16321 0.76548 0.86328 0.88775 0.84015 0.84796 0.85031 0.84855 0.84139 0.88214 0.86990 0.82458 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 48. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.21 9.48 36.01 0.34 0.55 16 2 C -0.10 0.00 5.78 -106.45 -0.62 -0.61 16 3 C -0.18 -0.02 4.86 -35.86 -0.17 -0.19 16 4 C -0.04 0.06 2.76 36.01 0.10 0.16 16 5 O -0.53 0.19 12.86 -35.23 -0.45 -0.26 16 6 Si 0.67 -1.45 32.12 -169.99 -5.46 -6.91 16 7 S 0.21 -0.02 20.82 -107.50 -2.24 -2.25 16 8 C -0.27 -0.33 6.45 -36.79 -0.24 -0.56 16 9 C 0.60 1.26 7.78 -12.89 -0.10 1.16 16 10 O -0.52 -2.80 16.44 5.19 0.09 -2.71 16 11 N -0.71 0.51 5.26 -54.35 -0.29 0.22 16 12 C 0.14 -0.17 4.32 -67.11 -0.29 -0.46 16 13 H 0.12 -0.04 7.46 -51.93 -0.39 -0.43 16 14 C -0.12 0.28 7.44 -25.92 -0.19 0.08 16 15 C -0.61 1.61 4.19 -25.92 -0.11 1.50 16 16 H 0.15 -0.76 8.14 -51.93 -0.42 -1.18 16 17 S 2.50 1.40 5.13 -107.50 -0.55 0.85 16 18 O -0.93 -3.49 17.13 -57.54 -0.99 -4.47 16 19 O -0.93 -2.92 16.30 -57.54 -0.94 -3.86 16 20 C -0.66 -0.39 5.66 -39.58 -0.22 -0.61 16 21 C -0.02 0.00 9.47 -39.58 -0.37 -0.38 16 22 C -0.14 0.08 10.05 -39.58 -0.40 -0.31 16 23 C -0.06 0.06 10.05 -39.58 -0.40 -0.34 16 24 C -0.14 0.08 10.05 -39.58 -0.40 -0.31 16 25 C -0.03 -0.01 9.47 -39.58 -0.37 -0.38 16 26 C -0.12 0.31 7.42 -25.92 -0.19 0.11 16 27 C -0.04 -0.04 9.78 -40.43 -0.40 -0.44 16 28 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 29 H 0.07 -0.17 8.10 -51.93 -0.42 -0.59 16 30 H 0.07 -0.16 6.99 -51.93 -0.36 -0.53 16 31 H 0.09 -0.29 6.24 -51.93 -0.32 -0.61 16 32 H 0.38 -1.69 8.74 45.56 0.40 -1.29 16 33 H -0.24 0.15 7.11 56.52 0.40 0.55 16 34 H -0.24 -0.08 7.11 56.52 0.40 0.33 16 35 H 0.40 -1.08 7.81 -40.82 -0.32 -1.39 16 36 H 0.12 -0.30 7.43 -51.93 -0.39 -0.69 16 37 H 0.09 -0.25 8.14 -51.93 -0.42 -0.67 16 38 H 0.14 -0.16 7.57 -52.49 -0.40 -0.56 16 39 H 0.13 -0.35 8.06 -52.48 -0.42 -0.78 16 40 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 41 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 42 H 0.14 -0.15 7.57 -52.48 -0.40 -0.54 16 43 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 44 H 0.11 -0.38 8.10 -51.93 -0.42 -0.80 16 45 H 0.16 0.08 8.06 -52.49 -0.42 -0.34 16 LS Contribution 406.09 15.07 6.12 6.12 Total: 0.00 -12.61 406.09 -14.34 -26.95 By element: Atomic # 1 Polarization: -7.04 SS G_CDS: -5.60 Total: -12.64 kcal Atomic # 6 Polarization: 3.00 SS G_CDS: -4.03 Total: -1.03 kcal Atomic # 7 Polarization: 0.51 SS G_CDS: -0.29 Total: 0.22 kcal Atomic # 8 Polarization: -9.02 SS G_CDS: -2.29 Total: -11.31 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.46 Total: -6.91 kcal Atomic # 16 Polarization: 1.38 SS G_CDS: -2.79 Total: -1.41 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -12.61 -14.34 -26.95 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12550010_6739946.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.558 kcal (2) G-P(sol) polarization free energy of solvation -12.611 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.168 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.336 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.947 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.505 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.94 seconds