Wall clock time and date at job start Sat Mar 6 2021 18:01:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.33807 * 122.45182 * 2 1 4 4 C 1.50703 * 124.52530 * 359.97438 * 3 2 1 5 5 O 1.42898 * 109.47473 * 113.45794 * 4 3 2 6 6 Si 1.86300 * 109.46754 * 233.45568 * 4 3 2 7 7 S 1.70622 * 110.95517 * 180.23971 * 3 2 1 8 8 C 1.75828 * 91.56093 * 359.65498 * 7 3 2 9 9 C 1.46585 * 125.45997 * 180.02562 * 8 7 3 10 10 O 1.21697 * 120.00020 * 180.32261 * 9 8 7 11 11 N 1.34785 * 119.99541 * 0.32686 * 9 8 7 12 12 C 1.46504 * 119.99431 * 179.97438 * 11 9 8 13 13 H 1.09001 * 112.85123 * 336.19595 * 12 11 9 14 14 C 1.53784 * 113.61324 * 107.50174 * 12 11 9 15 15 C 1.53775 * 87.08040 * 89.11039 * 14 12 11 16 16 H 1.08998 * 113.62033 * 270.88051 * 15 14 12 17 17 S 1.81405 * 113.61248 * 139.98090 * 15 14 12 18 18 O 1.42101 * 110.54208 * 194.12707 * 17 15 14 19 19 O 1.42100 * 110.54284 * 330.87740 * 17 15 14 20 20 C 1.76199 * 104.44815 * 82.50525 * 17 15 14 21 21 C 1.38236 * 119.99791 * 269.72312 * 20 17 15 22 22 C 1.38233 * 120.00035 * 179.81079 * 21 20 17 23 23 C 1.38239 * 119.99717 * 0.40169 * 22 21 20 24 24 C 1.38228 * 120.00187 * 359.85499 * 23 22 21 25 25 C 1.38231 * 120.00163 * 90.00403 * 20 17 15 26 26 C 1.53779 * 87.08355 * 25.43365 * 15 14 12 27 27 C 1.36650 * 109.08497 * 0.33738 * 8 7 3 28 28 H 1.09006 * 109.46409 * 85.00991 * 1 2 3 29 29 H 1.08998 * 109.47510 * 205.01178 * 1 2 3 30 30 H 1.09003 * 109.47208 * 325.01973 * 1 2 3 31 31 H 1.09001 * 109.46912 * 353.45009 * 4 3 2 32 32 H 0.96694 * 113.99806 * 180.02562 * 5 4 3 33 33 H 1.48511 * 109.99884 * 178.67541 * 6 4 3 34 34 H 1.48497 * 110.00252 * 299.99501 * 6 4 3 35 35 H 0.96998 * 120.00090 * 359.97438 * 11 9 8 36 36 H 1.08995 * 113.61442 * 203.66343 * 14 12 11 37 37 H 1.08999 * 113.61361 * 334.56705 * 14 12 11 38 38 H 1.08002 * 119.99929 * 0.02562 * 21 20 17 39 39 H 1.08004 * 120.00272 * 180.23048 * 22 21 20 40 40 H 1.07999 * 119.99958 * 179.83567 * 23 22 21 41 41 H 1.07998 * 120.00047 * 179.97438 * 24 23 22 42 42 H 1.08003 * 120.00326 * 359.97438 * 25 20 17 43 43 H 1.09002 * 113.61664 * 220.01826 * 26 15 14 44 44 H 1.08993 * 113.61396 * 89.11398 * 26 15 14 45 45 H 1.07996 * 123.34942 * 179.77889 * 27 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1291 0.0000 4 6 1.6356 2.5161 -0.0006 5 8 1.9424 3.1646 1.2353 6 14 2.3559 3.4963 -1.4117 7 16 3.8970 0.7891 -0.0067 8 6 3.5936 -0.9428 0.0011 9 6 4.6230 -1.9865 0.0006 10 8 4.2999 -3.1598 0.0004 11 7 5.9273 -1.6465 0.0004 12 6 6.9560 -2.6896 0.0004 13 1 6.5990 -3.6362 0.4060 14 6 7.6901 -2.8308 -1.3435 15 6 8.6822 -1.7776 -0.8226 16 1 8.3887 -0.7523 -1.0477 17 16 10.4085 -2.1290 -1.2551 18 8 11.2894 -1.3205 -0.4871 19 8 10.6173 -3.5294 -1.3758 20 6 10.5825 -1.5202 -2.8994 21 6 10.3310 -2.3520 -3.9745 22 6 10.4636 -1.8734 -5.2645 23 6 10.8558 -0.5654 -5.4795 24 6 11.1125 0.2648 -4.4045 25 6 10.9760 -0.2127 -3.1144 26 6 8.2979 -2.2312 0.5956 27 6 2.2445 -1.1602 0.0007 28 1 -0.3632 0.0894 -1.0239 29 1 -0.3634 -0.9312 0.4345 30 1 -0.3634 0.8420 0.5892 31 1 0.5539 2.4511 -0.1182 32 1 1.5930 4.0635 1.3051 33 1 1.7590 4.8558 -1.4426 34 1 3.8303 3.5922 -1.2631 35 1 6.1847 -0.7113 0.0002 36 1 8.1365 -3.8134 -1.4960 37 1 7.1043 -2.4935 -2.1986 38 1 10.0275 -3.3748 -3.8066 39 1 10.2635 -2.5221 -6.1045 40 1 10.9621 -0.1921 -6.4874 41 1 11.4193 1.2866 -4.5725 42 1 11.1765 0.4360 -2.2745 43 1 8.2027 -1.4100 1.3060 44 1 8.9104 -3.0499 0.9731 45 1 1.8019 -2.1452 0.0013 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12550010_6739946.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:01:45 Heat of formation + Delta-G solvation = -42.358543 kcal Electronic energy + Delta-G solvation = -31300.241584 eV Core-core repulsion = 26890.484137 eV Total energy + Delta-G solvation = -4409.757448 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.079 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -41.46736 -40.06456 -40.02739 -39.17570 -38.24615 -37.64444 -37.10020 -34.61243 -32.46671 -32.32592 -32.02061 -29.91521 -27.79402 -27.06157 -26.06146 -24.35424 -24.08633 -23.73390 -22.10666 -21.19774 -20.00981 -19.90138 -19.44298 -18.97231 -18.58514 -18.05868 -17.50313 -17.01717 -17.01119 -16.96460 -16.29695 -16.26165 -15.86859 -15.73687 -15.54802 -15.29834 -15.07227 -14.67150 -14.51613 -14.48663 -14.25531 -14.05101 -14.00019 -13.88181 -13.78202 -13.33565 -13.26542 -13.26027 -13.16162 -13.14585 -12.96158 -12.67241 -12.24236 -12.23974 -12.18857 -12.05949 -11.89414 -11.79519 -11.36358 -11.24704 -10.75763 -10.41037 -10.34901 -10.06521 -9.72429 -9.44462 -5.00527 -1.02787 -0.70688 -0.19786 0.27651 0.29408 0.74571 1.08227 1.24506 1.50963 1.73914 1.85128 1.86625 2.00202 2.40880 2.68535 2.86588 3.03093 3.18425 3.34295 3.46060 3.61987 3.73592 3.77439 3.85182 3.93108 4.08450 4.09150 4.23035 4.36371 4.37384 4.39685 4.41194 4.45884 4.49887 4.52226 4.63665 4.68990 4.76352 4.79732 4.84925 4.88760 4.93346 5.02370 5.06217 5.25336 5.29621 5.30532 5.37451 5.42031 5.84210 6.22818 6.50451 6.92548 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C -0.101 4.101 3 C -0.194 4.194 4 C -0.051 4.051 5 O -0.554 6.554 6 Si 0.731 3.269 7 S 0.221 5.779 8 C -0.284 4.284 9 C 0.597 3.403 10 O -0.560 6.560 11 N -0.700 5.700 12 C 0.128 3.872 13 H 0.110 0.890 14 C -0.124 4.124 15 C -0.580 4.580 16 H 0.183 0.817 17 S 2.504 3.496 18 O -0.971 6.971 19 O -0.963 6.963 20 C -0.666 4.666 21 C -0.040 4.040 22 C -0.148 4.148 23 C -0.070 4.070 24 C -0.147 4.147 25 C -0.044 4.044 26 C -0.120 4.120 27 C -0.051 4.051 28 H 0.094 0.906 29 H 0.073 0.927 30 H 0.075 0.925 31 H 0.112 0.888 32 H 0.400 0.600 33 H -0.263 1.263 34 H -0.275 1.275 35 H 0.411 0.589 36 H 0.120 0.880 37 H 0.102 0.898 38 H 0.148 0.852 39 H 0.153 0.847 40 H 0.155 0.845 41 H 0.153 0.847 42 H 0.147 0.853 43 H 0.116 0.884 44 H 0.118 0.882 45 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.654 6.372 -5.077 9.917 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C -0.114 4.114 3 C -0.313 4.313 4 C -0.161 4.161 5 O -0.365 6.365 6 Si 0.632 3.368 7 S 0.491 5.509 8 C -0.404 4.404 9 C 0.384 3.616 10 O -0.440 6.440 11 N -0.351 5.351 12 C 0.022 3.978 13 H 0.128 0.872 14 C -0.163 4.163 15 C -0.692 4.692 16 H 0.200 0.800 17 S 2.689 3.311 18 O -0.969 6.969 19 O -0.960 6.960 20 C -0.754 4.754 21 C -0.058 4.058 22 C -0.166 4.166 23 C -0.088 4.088 24 C -0.166 4.166 25 C -0.062 4.062 26 C -0.159 4.159 27 C -0.085 4.085 28 H 0.112 0.888 29 H 0.092 0.908 30 H 0.094 0.906 31 H 0.129 0.871 32 H 0.252 0.748 33 H -0.188 1.188 34 H -0.201 1.201 35 H 0.247 0.753 36 H 0.139 0.861 37 H 0.120 0.880 38 H 0.165 0.835 39 H 0.170 0.830 40 H 0.173 0.827 41 H 0.170 0.830 42 H 0.165 0.835 43 H 0.134 0.866 44 H 0.137 0.863 45 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges -3.078 6.224 -4.716 8.394 hybrid contribution -1.601 0.572 0.505 1.773 sum -4.678 6.796 -4.212 9.264 Atomic orbital electron populations 1.20687 0.87395 1.03734 1.04069 1.18851 0.99299 0.90122 1.03112 1.23482 0.98313 0.99046 1.10485 1.24369 1.04520 0.91938 0.95286 1.86566 1.80728 1.33999 1.35210 0.94021 0.78657 0.79814 0.84276 1.82887 1.04122 0.96280 1.67587 1.24503 0.98016 0.97733 1.20133 1.17082 0.82177 0.87093 0.75218 1.90841 1.82162 1.19645 1.51394 1.45423 1.04368 1.10446 1.74882 1.21737 0.86802 0.92406 0.96883 0.87218 1.23315 0.95490 0.98248 0.99265 1.31686 1.18621 1.11483 1.07456 0.79992 1.05039 0.78024 0.73843 0.74151 1.93532 1.62731 1.70620 1.69989 1.93541 1.85182 1.31114 1.86160 1.30421 1.18075 1.04730 1.22197 1.21219 0.92989 0.99262 0.92364 1.21687 1.00555 0.96912 0.97472 1.21920 0.92626 0.93509 1.00699 1.21674 1.00895 1.01762 0.92268 1.21225 0.92481 0.93207 0.99321 1.23231 0.96029 1.03930 0.92750 1.20820 0.91033 1.00462 0.96144 0.88771 0.90760 0.90623 0.87068 0.74835 1.18827 1.20091 0.75262 0.86134 0.87974 0.83461 0.82978 0.82747 0.82952 0.83512 0.86588 0.86336 0.82719 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.52 9.48 71.24 0.68 1.20 16 2 C -0.10 0.04 5.78 -21.05 -0.12 -0.08 16 3 C -0.19 0.07 4.86 24.68 0.12 0.19 16 4 C -0.05 0.20 2.76 71.24 0.20 0.40 16 5 O -0.55 0.88 12.86 -148.98 -1.92 -1.04 16 6 Si 0.73 -3.68 32.12 68.60 2.20 -1.48 16 7 S 0.22 -0.06 20.82 -56.49 -1.18 -1.23 16 8 C -0.28 -0.86 6.45 24.08 0.16 -0.71 16 9 C 0.60 3.08 7.78 86.42 0.67 3.75 16 10 O -0.56 -6.99 16.44 -4.34 -0.07 -7.06 16 11 N -0.70 0.88 5.26 -444.06 -2.34 -1.46 16 12 C 0.13 -0.28 4.32 45.52 0.20 -0.08 16 13 H 0.11 0.08 7.46 -2.39 -0.02 0.06 16 14 C -0.12 0.53 7.44 31.12 0.23 0.76 16 15 C -0.58 3.18 4.19 31.12 0.13 3.31 16 16 H 0.18 -2.03 8.14 -2.39 -0.02 -2.05 16 17 S 2.50 5.47 5.13 -56.49 -0.29 5.18 16 18 O -0.97 -8.60 17.13 -127.65 -2.19 -10.78 16 19 O -0.96 -7.64 16.30 -127.65 -2.08 -9.72 16 20 C -0.67 -1.27 5.66 22.27 0.13 -1.14 16 21 C -0.04 -0.04 9.47 22.27 0.21 0.17 16 22 C -0.15 0.22 10.05 22.27 0.22 0.45 16 23 C -0.07 0.19 10.05 22.27 0.22 0.41 16 24 C -0.15 0.25 10.05 22.27 0.22 0.47 16 25 C -0.04 -0.04 9.47 22.27 0.21 0.17 16 26 C -0.12 0.64 7.42 31.12 0.23 0.87 16 27 C -0.05 -0.13 9.78 21.72 0.21 0.08 16 28 H 0.09 -0.80 8.14 -2.38 -0.02 -0.82 16 29 H 0.07 -0.39 8.10 -2.39 -0.02 -0.40 16 30 H 0.07 -0.46 6.99 -2.39 -0.02 -0.48 16 31 H 0.11 -0.93 6.24 -2.39 -0.01 -0.94 16 32 H 0.40 -3.90 8.74 -74.06 -0.65 -4.55 16 33 H -0.26 0.50 7.11 99.48 0.71 1.21 16 34 H -0.28 -0.21 7.11 99.48 0.71 0.50 16 35 H 0.41 -2.41 7.81 -92.71 -0.72 -3.13 16 36 H 0.12 -0.52 7.43 -2.39 -0.02 -0.54 16 37 H 0.10 -0.56 8.14 -2.39 -0.02 -0.58 16 38 H 0.15 -0.18 7.57 -2.91 -0.02 -0.21 16 39 H 0.15 -0.92 8.06 -2.91 -0.02 -0.94 16 40 H 0.15 -1.23 8.06 -2.91 -0.02 -1.25 16 41 H 0.15 -0.97 8.06 -2.91 -0.02 -0.99 16 42 H 0.15 -0.21 7.57 -2.91 -0.02 -0.23 16 43 H 0.12 -0.96 8.14 -2.39 -0.02 -0.98 16 44 H 0.12 -0.75 8.10 -2.39 -0.02 -0.77 16 45 H 0.16 0.36 8.06 -2.91 -0.02 0.34 16 Total: 0.00 -29.93 406.09 -4.21 -34.14 By element: Atomic # 1 Polarization: -16.48 SS G_CDS: -0.28 Total: -16.76 kcal Atomic # 6 Polarization: 6.30 SS G_CDS: 3.92 Total: 10.22 kcal Atomic # 7 Polarization: 0.88 SS G_CDS: -2.34 Total: -1.46 kcal Atomic # 8 Polarization: -22.35 SS G_CDS: -6.25 Total: -28.61 kcal Atomic # 14 Polarization: -3.68 SS G_CDS: 2.20 Total: -1.48 kcal Atomic # 16 Polarization: 5.41 SS G_CDS: -1.47 Total: 3.94 kcal Total: -29.93 -4.21 -34.14 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12550010_6739946.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.221 kcal (2) G-P(sol) polarization free energy of solvation -29.927 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.148 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.210 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.138 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.359 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds