Wall clock time and date at job start Sat Mar 6 2021 18:02:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.37939 * 120.07868 * 2 1 4 4 C 1.38373 * 120.14566 * 180.30427 * 3 2 1 5 5 C 1.50703 * 119.85573 * 179.69952 * 4 3 2 6 6 C 1.38335 * 120.29387 * 359.67108 * 4 3 2 7 7 C 1.50708 * 119.92730 * 180.02562 * 6 4 3 8 8 O 1.42904 * 109.46982 * 285.02223 * 7 6 4 9 9 Si 1.86304 * 109.46939 * 165.02655 * 7 6 4 10 10 C 1.37977 * 120.14716 * 0.02995 * 6 4 3 11 11 C 1.39559 * 119.84891 * 359.97438 * 10 6 4 12 12 C 1.47850 * 120.14335 * 180.02562 * 11 10 6 13 13 O 1.21549 * 119.99826 * 173.75665 * 12 11 10 14 14 N 1.34780 * 119.99871 * 354.02890 * 12 11 10 15 15 C 1.46501 * 119.99709 * 179.72586 * 14 12 11 16 16 H 1.08993 * 112.84962 * 25.33666 * 15 14 12 17 17 C 1.53778 * 113.61075 * 156.53335 * 15 14 12 18 18 C 1.53787 * 87.08253 * 89.11461 * 17 15 14 19 19 H 1.08997 * 113.61296 * 270.88312 * 18 17 15 20 20 S 1.81396 * 113.61223 * 140.06310 * 18 17 15 21 21 O 1.42099 * 110.54721 * 296.62224 * 20 18 17 22 22 O 1.42101 * 110.54709 * 73.37867 * 20 18 17 23 23 C 1.76206 * 104.44884 * 184.99896 * 20 18 17 24 24 C 1.38226 * 120.00296 * 269.73096 * 23 20 18 25 25 C 1.38238 * 120.00393 * 179.78780 * 24 23 20 26 26 C 1.38236 * 119.99608 * 0.45953 * 25 24 23 27 27 C 1.38241 * 119.99842 * 359.76987 * 26 25 24 28 28 C 1.38230 * 120.00350 * 0.02562 * 27 26 25 29 29 C 1.53779 * 113.61259 * 254.13976 * 15 14 12 30 30 H 1.09000 * 109.47077 * 263.71071 * 1 2 3 31 31 H 1.09000 * 109.46981 * 23.70839 * 1 2 3 32 32 H 1.09006 * 109.47557 * 143.70451 * 1 2 3 33 33 H 1.07998 * 119.92026 * 0.02562 * 3 2 1 34 34 H 1.08992 * 109.47235 * 269.97539 * 5 4 3 35 35 H 1.09008 * 109.46826 * 29.97738 * 5 4 3 36 36 H 1.08996 * 109.47054 * 149.97071 * 5 4 3 37 37 H 1.08990 * 109.47199 * 45.02467 * 7 6 4 38 38 H 0.96699 * 113.99503 * 179.97438 * 8 7 6 39 39 H 1.48501 * 109.99943 * 60.00153 * 9 7 6 40 40 H 1.48498 * 109.99963 * 181.31773 * 9 7 6 41 41 H 1.08000 * 120.07961 * 179.97438 * 10 6 4 42 42 H 0.96998 * 119.99989 * 359.73420 * 14 12 11 43 43 H 1.08999 * 113.61179 * 203.66343 * 17 15 14 44 44 H 1.09000 * 113.61613 * 334.48047 * 17 15 14 45 45 H 1.08004 * 119.99660 * 359.97438 * 24 23 20 46 46 H 1.07995 * 120.00418 * 180.24784 * 25 24 23 47 47 H 1.07995 * 119.99981 * 179.79373 * 26 25 24 48 48 H 1.08001 * 119.99496 * 180.02562 * 27 26 25 49 49 H 1.07995 * 120.00357 * 179.97438 * 28 27 26 50 50 H 1.09003 * 113.61941 * 25.43098 * 29 15 14 51 51 H 1.08994 * 113.61834 * 156.33984 * 29 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1983 1.1936 0.0000 4 6 3.5820 1.1953 -0.0064 5 6 4.3307 2.5032 -0.0132 6 6 4.2812 0.0016 -0.0059 7 6 5.7883 0.0130 -0.0123 8 8 6.2564 0.3621 -1.3165 9 14 6.4240 -1.6778 0.4437 10 6 3.6020 -1.1994 0.0003 11 6 2.2065 -1.2081 0.0066 12 6 1.4720 -2.4912 0.0139 13 8 0.2625 -2.4985 0.1338 14 7 2.1443 -3.6531 -0.1071 15 6 1.4171 -4.9248 -0.0939 16 1 0.3816 -4.8237 -0.4185 17 6 2.1706 -6.0724 -0.7867 18 6 2.8169 -6.3667 0.5774 19 1 3.7406 -5.8147 0.7510 20 16 2.9756 -8.1371 0.9394 21 8 1.6943 -8.7455 1.0246 22 8 4.0106 -8.7155 0.1563 23 6 3.5945 -8.1949 2.5882 24 6 4.9580 -8.2087 2.8146 25 6 5.4435 -8.2496 4.1083 26 6 4.5654 -8.2863 5.1752 27 6 3.2017 -8.2773 4.9486 28 6 2.7162 -8.2321 3.6552 29 6 1.5775 -5.7126 1.2171 30 1 -0.3633 -0.1126 1.0215 31 1 -0.3633 0.9409 -0.4132 32 1 -0.3634 -0.8283 -0.6083 33 1 1.6583 2.1289 0.0004 34 1 4.5068 2.8156 -1.0424 35 1 3.7409 3.2621 0.5011 36 1 5.2857 2.3778 0.4970 37 1 6.1491 0.7441 0.7111 38 1 7.2199 0.3894 -1.3942 39 1 5.9389 -2.6837 -0.5350 40 1 7.9087 -1.6715 0.4721 41 1 4.1490 -2.1306 0.0002 42 1 3.1095 -3.6473 -0.2027 43 1 1.5190 -6.8706 -1.1424 44 1 2.8790 -5.7355 -1.5435 45 1 5.6441 -8.1844 1.9808 46 1 6.5089 -8.2563 4.2853 47 1 4.9446 -8.3217 6.1858 48 1 2.5156 -8.3056 5.7823 49 1 1.6509 -8.2255 3.4782 50 1 1.8086 -5.0852 2.0780 51 1 0.7642 -6.4125 1.4083 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12550010_9599494.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:02:08 Heat of formation + Delta-G solvation = -42.616267 kcal Electronic energy + Delta-G solvation = -35797.554382 eV Core-core repulsion = 31143.095894 eV Total energy + Delta-G solvation = -4654.458489 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.138 amu Computer time = 3.47 seconds Orbital eigenvalues (eV) -41.84125 -40.68000 -40.14112 -39.25426 -38.10837 -37.77467 -36.95440 -34.91028 -34.48863 -33.10796 -32.39958 -32.09919 -29.48270 -28.70242 -27.22246 -26.89826 -25.53648 -24.25847 -23.81442 -23.76785 -22.79670 -21.22591 -20.79881 -19.93845 -19.20028 -18.74744 -18.68585 -17.97114 -17.53682 -17.06352 -17.01542 -16.78483 -16.38577 -16.27754 -16.15040 -15.82107 -15.63052 -15.48584 -15.24373 -14.88841 -14.67683 -14.61160 -14.59635 -14.32136 -14.12934 -14.09390 -14.00772 -13.87271 -13.71457 -13.41778 -13.29867 -13.23079 -13.09358 -12.99389 -12.90630 -12.78810 -12.62290 -12.33992 -12.26876 -12.15160 -11.94652 -11.91784 -11.80012 -11.28604 -10.71534 -10.57735 -10.44852 -10.26452 -10.12214 -9.91529 -9.62401 -5.17593 -1.02128 -0.24183 -0.23457 0.14919 0.21703 1.07527 1.37329 1.69922 1.74022 1.76548 1.90970 2.35027 2.59637 2.64230 2.80126 2.97907 3.17881 3.30995 3.37525 3.52378 3.55432 3.59948 3.65094 3.76665 3.79238 3.82511 3.92475 4.01525 4.09171 4.23012 4.24164 4.26643 4.33035 4.33932 4.41509 4.47916 4.50035 4.52179 4.59897 4.64110 4.64376 4.69798 4.73336 4.83848 4.85644 4.93289 4.98976 5.02325 5.06114 5.15557 5.23648 5.29038 5.39345 5.45538 5.54730 5.74547 5.78808 6.29495 6.32550 7.10666 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C -0.007 4.007 3 C -0.132 4.132 4 C -0.024 4.024 5 C -0.120 4.120 6 C -0.090 4.090 7 C -0.073 4.073 8 O -0.532 6.532 9 Si 0.675 3.325 10 C -0.074 4.074 11 C -0.147 4.147 12 C 0.566 3.434 13 O -0.521 6.521 14 N -0.714 5.714 15 C 0.137 3.863 16 H 0.119 0.881 17 C -0.120 4.120 18 C -0.605 4.605 19 H 0.154 0.846 20 S 2.499 3.501 21 O -0.929 6.929 22 O -0.935 6.935 23 C -0.658 4.658 24 C -0.026 4.026 25 C -0.140 4.140 26 C -0.064 4.064 27 C -0.140 4.140 28 C -0.022 4.022 29 C -0.122 4.122 30 H 0.079 0.921 31 H 0.060 0.940 32 H 0.096 0.904 33 H 0.134 0.866 34 H 0.080 0.920 35 H 0.070 0.930 36 H 0.071 0.929 37 H 0.079 0.921 38 H 0.380 0.620 39 H -0.252 1.252 40 H -0.256 1.256 41 H 0.126 0.874 42 H 0.400 0.600 43 H 0.112 0.888 44 H 0.098 0.902 45 H 0.141 0.859 46 H 0.134 0.866 47 H 0.132 0.868 48 H 0.134 0.866 49 H 0.142 0.858 50 H 0.094 0.906 51 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.748 4.463 4.408 7.307 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C -0.008 4.008 3 C -0.150 4.150 4 C -0.024 4.024 5 C -0.177 4.177 6 C -0.090 4.090 7 C -0.182 4.182 8 O -0.339 6.339 9 Si 0.576 3.424 10 C -0.092 4.092 11 C -0.150 4.150 12 C 0.355 3.645 13 O -0.398 6.398 14 N -0.366 5.366 15 C 0.030 3.970 16 H 0.137 0.863 17 C -0.159 4.159 18 C -0.715 4.715 19 H 0.172 0.828 20 S 2.680 3.320 21 O -0.926 6.926 22 O -0.932 6.932 23 C -0.745 4.745 24 C -0.045 4.045 25 C -0.159 4.159 26 C -0.082 4.082 27 C -0.158 4.158 28 C -0.041 4.041 29 C -0.162 4.162 30 H 0.098 0.902 31 H 0.079 0.921 32 H 0.114 0.886 33 H 0.152 0.848 34 H 0.098 0.902 35 H 0.089 0.911 36 H 0.090 0.910 37 H 0.097 0.903 38 H 0.228 0.772 39 H -0.177 1.177 40 H -0.181 1.181 41 H 0.144 0.856 42 H 0.236 0.764 43 H 0.130 0.870 44 H 0.116 0.884 45 H 0.158 0.842 46 H 0.151 0.849 47 H 0.150 0.850 48 H 0.152 0.848 49 H 0.160 0.840 50 H 0.113 0.887 51 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges 2.540 3.067 3.611 5.375 hybrid contribution 1.891 1.107 -0.075 2.192 sum 4.431 4.174 3.536 7.040 Atomic orbital electron populations 1.21128 0.89563 1.03400 1.03906 1.20094 0.97054 0.91204 0.92410 1.21018 0.93242 0.97932 1.02790 1.19990 0.93521 0.95112 0.93801 1.20918 1.00097 0.93423 1.03233 1.18918 0.93290 0.92730 1.04095 1.24720 0.94370 1.11023 0.88130 1.86622 1.26777 1.91171 1.29336 0.95245 0.81155 0.76682 0.89331 1.21111 0.93242 0.97505 0.97377 1.19535 0.92865 0.93113 1.09529 1.18218 0.87073 0.83359 0.75850 1.90762 1.13493 1.86961 1.48547 1.45604 1.10749 1.05002 1.75242 1.21649 0.97861 0.82059 0.95438 0.86266 1.23094 0.99822 0.99724 0.93246 1.31849 1.08031 1.24229 1.07367 0.82765 1.05406 0.74779 0.77304 0.74490 1.93591 1.40765 1.72334 1.85946 1.93584 1.57414 1.74042 1.68152 1.30500 1.02802 1.18568 1.22610 1.20986 0.93250 0.91975 0.98302 1.21354 1.00533 1.01449 0.92541 1.21572 0.93625 0.93407 0.99646 1.21370 0.95951 1.01332 0.97182 1.20990 0.99630 0.91574 0.91893 1.23293 0.94053 0.99714 0.99135 0.90231 0.92076 0.88576 0.84806 0.90152 0.91114 0.91016 0.90340 0.77239 1.17713 1.18108 0.85631 0.76449 0.86974 0.88373 0.84171 0.84852 0.85035 0.84811 0.84046 0.88695 0.86580 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.15 8.72 36.00 0.31 0.16 16 2 C -0.01 -0.01 5.91 -104.23 -0.62 -0.63 16 3 C -0.13 -0.06 9.31 -39.64 -0.37 -0.43 16 4 C -0.02 -0.01 5.89 -104.53 -0.62 -0.62 16 5 C -0.12 0.17 9.53 36.01 0.34 0.51 16 6 C -0.09 -0.01 5.29 -104.68 -0.55 -0.57 16 7 C -0.07 0.11 2.03 36.01 0.07 0.18 16 8 O -0.53 0.18 12.78 -35.23 -0.45 -0.27 16 9 Si 0.67 -1.63 30.19 -169.99 -5.13 -6.76 16 10 C -0.07 0.01 8.13 -39.18 -0.32 -0.31 16 11 C -0.15 -0.18 5.87 -104.96 -0.62 -0.80 16 12 C 0.57 0.88 7.70 -12.33 -0.09 0.79 16 13 O -0.52 -2.13 12.97 5.32 0.07 -2.06 16 14 N -0.71 0.78 5.21 -53.96 -0.28 0.50 16 15 C 0.14 -0.21 4.30 -67.12 -0.29 -0.50 16 16 H 0.12 -0.08 7.50 -51.93 -0.39 -0.47 16 17 C -0.12 0.32 7.41 -25.92 -0.19 0.12 16 18 C -0.61 1.70 4.21 -25.77 -0.11 1.59 16 19 H 0.15 -0.80 8.14 -51.93 -0.42 -1.23 16 20 S 2.50 1.20 5.09 -107.50 -0.55 0.65 16 21 O -0.93 -2.86 16.46 -57.54 -0.95 -3.81 16 22 O -0.93 -3.47 17.12 -57.54 -0.98 -4.46 16 23 C -0.66 -0.24 5.66 -39.58 -0.22 -0.47 16 24 C -0.03 0.00 9.47 -39.59 -0.37 -0.37 16 25 C -0.14 0.13 10.05 -39.58 -0.40 -0.27 16 26 C -0.06 0.08 10.05 -39.58 -0.40 -0.32 16 27 C -0.14 0.12 10.05 -39.58 -0.40 -0.28 16 28 C -0.02 0.00 9.47 -39.58 -0.37 -0.37 16 29 C -0.12 0.31 7.46 -25.78 -0.19 0.12 16 30 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 31 H 0.06 -0.01 8.04 -51.93 -0.42 -0.43 16 32 H 0.10 0.27 5.87 -51.93 -0.30 -0.03 16 33 H 0.13 -0.17 8.06 -52.49 -0.42 -0.59 16 34 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 35 H 0.07 -0.17 8.08 -51.92 -0.42 -0.59 16 36 H 0.07 -0.15 6.22 -51.93 -0.32 -0.48 16 37 H 0.08 -0.24 6.48 -51.93 -0.34 -0.58 16 38 H 0.38 -1.57 8.74 45.56 0.40 -1.17 16 39 H -0.25 0.13 6.75 56.52 0.38 0.51 16 40 H -0.26 0.08 7.11 56.52 0.40 0.48 16 41 H 0.13 -0.26 3.28 -52.49 -0.17 -0.44 16 42 H 0.40 -1.20 6.78 -40.82 -0.28 -1.47 16 43 H 0.11 -0.37 8.10 -51.93 -0.42 -0.79 16 44 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 45 H 0.14 -0.18 7.56 -52.48 -0.40 -0.58 16 46 H 0.13 -0.40 8.06 -52.49 -0.42 -0.83 16 47 H 0.13 -0.45 8.06 -52.49 -0.42 -0.87 16 48 H 0.13 -0.38 8.06 -52.49 -0.42 -0.80 16 49 H 0.14 -0.19 7.57 -52.49 -0.40 -0.59 16 50 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 51 H 0.12 -0.33 7.55 -51.93 -0.39 -0.73 16 LS Contribution 424.89 15.07 6.40 6.40 Total: 0.00 -12.09 424.89 -14.14 -26.23 By element: Atomic # 1 Polarization: -7.09 SS G_CDS: -6.87 Total: -13.96 kcal Atomic # 6 Polarization: 2.94 SS G_CDS: -5.40 Total: -2.46 kcal Atomic # 7 Polarization: 0.78 SS G_CDS: -0.28 Total: 0.50 kcal Atomic # 8 Polarization: -8.29 SS G_CDS: -2.31 Total: -10.60 kcal Atomic # 14 Polarization: -1.63 SS G_CDS: -5.13 Total: -6.76 kcal Atomic # 16 Polarization: 1.20 SS G_CDS: -0.55 Total: 0.65 kcal Total LS contribution 6.40 Total: 6.40 kcal Total: -12.09 -14.14 -26.23 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12550010_9599494.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.382 kcal (2) G-P(sol) polarization free energy of solvation -12.089 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.472 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.145 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.234 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.616 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.47 seconds