Wall clock time and date at job start Sat Mar 6 2021 19:31:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52994 * 109.47056 * 2 1 4 4 C 1.53000 * 109.47234 * 239.99991 * 2 1 3 5 5 O 1.45198 * 109.47081 * 120.00327 * 2 1 3 6 6 C 1.34230 * 117.00489 * 60.00143 * 5 2 1 7 7 O 1.20824 * 119.99945 * 359.97438 * 6 5 2 8 8 C 1.50696 * 120.00412 * 180.02562 * 6 5 2 9 9 H 1.09005 * 112.90203 * 311.24923 * 8 6 5 10 10 C 1.53780 * 113.61826 * 82.49474 * 8 6 5 11 11 C 1.53785 * 87.08093 * 139.98343 * 10 8 6 12 12 H 1.08995 * 113.68902 * 89.12859 * 11 10 8 13 13 N 1.46493 * 113.61537 * 220.02199 * 11 10 8 14 14 C 1.34775 * 120.00158 * 252.49919 * 13 11 10 15 15 O 1.21693 * 119.99904 * 359.97438 * 14 13 11 16 16 C 1.46682 * 120.00420 * 180.02562 * 14 13 11 17 17 C 1.37869 * 126.23911 * 179.97438 * 16 14 13 18 18 C 1.39831 * 107.08662 * 179.97438 * 17 16 14 19 19 C 1.50706 * 126.06313 * 179.97438 * 18 17 16 20 20 O 1.42895 * 109.47147 * 299.99836 * 19 18 17 21 21 Si 1.86299 * 109.46748 * 180.02562 * 19 18 17 22 22 C 1.35452 * 107.86650 * 0.24279 * 18 17 16 23 23 N 1.35533 * 108.86713 * 359.60053 * 22 18 17 24 24 C 1.53778 * 113.61674 * 179.97438 * 8 6 5 25 25 H 1.09002 * 109.47157 * 299.99404 * 1 2 3 26 26 H 1.08998 * 109.47248 * 59.99835 * 1 2 3 27 27 H 1.09003 * 109.46899 * 179.97438 * 1 2 3 28 28 H 1.09003 * 109.47548 * 179.97438 * 3 2 1 29 29 H 1.08998 * 109.47227 * 300.00178 * 3 2 1 30 30 H 1.09003 * 109.47328 * 59.99966 * 3 2 1 31 31 H 1.09000 * 109.47111 * 300.00652 * 4 2 1 32 32 H 1.09004 * 109.46902 * 59.99512 * 4 2 1 33 33 H 1.08999 * 109.47378 * 180.02562 * 4 2 1 34 34 H 1.09002 * 113.61193 * 25.43692 * 10 8 6 35 35 H 1.08994 * 113.61877 * 254.53190 * 10 8 6 36 36 H 0.97001 * 120.00256 * 72.50206 * 13 11 10 37 37 H 1.08007 * 126.44973 * 359.97438 * 17 16 14 38 38 H 1.09001 * 109.46740 * 60.00235 * 19 18 17 39 39 H 0.96695 * 114.00385 * 300.00674 * 20 19 18 40 40 H 1.48504 * 109.99999 * 180.02562 * 21 19 18 41 41 H 1.48504 * 110.00212 * 301.31915 * 21 19 18 42 42 H 1.07997 * 125.55922 * 179.71740 * 22 18 17 43 43 H 0.96998 * 125.67157 * 180.13317 * 23 22 18 44 44 H 1.09003 * 113.61424 * 105.46700 * 24 8 6 45 45 H 1.09001 * 113.61429 * 334.56125 * 24 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0140 -0.6845 1.1855 6 6 1.6534 -1.9685 1.3378 7 8 0.9560 -2.5026 0.5082 8 6 2.1174 -2.7435 2.5440 9 1 3.1877 -2.6449 2.7257 10 6 1.2560 -2.5085 3.7961 11 6 1.4001 -4.0128 4.0813 12 1 2.2737 -4.2627 4.6833 13 7 0.1706 -4.6366 4.5767 14 6 0.0756 -5.0053 5.8695 15 8 1.0113 -4.8204 6.6253 16 6 -1.1552 -5.6304 6.3654 17 6 -1.3907 -6.0558 7.6556 18 6 -2.6843 -6.5859 7.6837 19 6 -3.3761 -7.1741 8.8865 20 8 -2.6236 -8.2878 9.3715 21 14 -5.0838 -7.7417 8.4048 22 6 -3.2030 -6.4825 6.4367 23 7 -2.2859 -5.8985 5.6276 24 6 1.6190 -4.1980 2.5709 25 1 -0.3633 0.5137 0.8900 26 1 -0.3633 0.5138 -0.8899 27 1 -0.3633 -1.0277 -0.0005 28 1 3.1300 1.4425 0.0005 29 1 1.6766 1.9563 -0.8899 30 1 1.6766 1.9563 0.8900 31 1 1.6766 -1.7489 -1.2493 32 1 1.6766 -0.2074 -2.1392 33 1 3.1300 -0.7217 -1.2490 34 1 0.2341 -2.2026 3.5718 35 1 1.7344 -1.8748 4.5427 36 1 -0.5751 -4.7843 3.9742 37 1 -0.7050 -5.9916 8.4876 38 1 -3.4511 -6.4181 9.6682 39 1 -2.5164 -9.0007 8.7271 40 1 -5.7768 -8.3232 9.5824 41 1 -5.8664 -6.5992 7.8685 42 1 -4.1875 -6.8101 6.1369 43 1 -2.4049 -5.7056 4.6845 44 1 2.3907 -4.9286 2.3281 45 1 0.6963 -4.3538 2.0118 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12626394_10543058.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:31:15 Heat of formation + Delta-G solvation = -82.041046 kcal Electronic energy + Delta-G solvation = -27091.929261 eV Core-core repulsion = 23077.851350 eV Total energy + Delta-G solvation = -4014.077911 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.161 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -42.54399 -42.13646 -40.71645 -39.22298 -37.67991 -37.61544 -35.13898 -34.63095 -32.52237 -30.78274 -28.42957 -28.41214 -28.02735 -26.99627 -26.42195 -24.49211 -22.89919 -21.45361 -21.15992 -20.85608 -20.43079 -19.79237 -18.67102 -17.64610 -17.47509 -17.16763 -17.07580 -16.59062 -16.48335 -16.19683 -15.80931 -15.61964 -15.30823 -15.12177 -14.71599 -14.65698 -14.57208 -14.32017 -13.90736 -13.79071 -13.65208 -13.50196 -13.48391 -13.18708 -12.99562 -12.93045 -12.70670 -12.53628 -12.44013 -12.22797 -12.10888 -11.95102 -11.84869 -11.40962 -11.17312 -10.93275 -10.38565 -10.26735 -9.94311 -9.32684 -5.04755 0.37825 1.14373 1.33345 1.49038 1.55106 1.64741 1.92573 2.00325 2.06618 2.32527 3.10366 3.19150 3.50794 3.54492 3.59995 3.66749 3.70824 3.73074 3.84341 3.87531 3.89834 4.01438 4.31166 4.38766 4.41561 4.46498 4.47996 4.52676 4.62976 4.68394 4.68916 4.70649 4.74445 4.80222 4.83612 4.87558 4.95491 5.01782 5.04728 5.20815 5.23691 5.29546 5.53028 5.57608 5.78084 6.17259 6.36352 6.71740 6.79675 7.07168 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C 0.116 3.884 3 C -0.142 4.142 4 C -0.183 4.183 5 O -0.347 6.347 6 C 0.477 3.523 7 O -0.502 6.502 8 C -0.111 4.111 9 H 0.131 0.869 10 C -0.134 4.134 11 C 0.127 3.873 12 H 0.127 0.873 13 N -0.722 5.722 14 C 0.593 3.407 15 O -0.522 6.522 16 C -0.060 4.060 17 C -0.073 4.073 18 C -0.211 4.211 19 C -0.033 4.033 20 O -0.542 6.542 21 Si 0.687 3.313 22 C 0.035 3.965 23 N -0.535 5.535 24 C -0.126 4.126 25 H 0.061 0.939 26 H 0.073 0.927 27 H 0.082 0.918 28 H 0.068 0.932 29 H 0.080 0.920 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.073 0.927 33 H 0.062 0.938 34 H 0.090 0.910 35 H 0.090 0.910 36 H 0.396 0.604 37 H 0.151 0.849 38 H 0.111 0.889 39 H 0.377 0.623 40 H -0.256 1.256 41 H -0.258 1.258 42 H 0.176 0.824 43 H 0.418 0.582 44 H 0.089 0.911 45 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.098 -0.392 -5.345 5.756 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.240 4.240 2 C 0.080 3.920 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.265 6.265 6 C 0.320 3.680 7 O -0.390 6.390 8 C -0.131 4.131 9 H 0.149 0.851 10 C -0.173 4.173 11 C 0.022 3.978 12 H 0.145 0.855 13 N -0.373 5.373 14 C 0.381 3.619 15 O -0.397 6.397 16 C -0.172 4.172 17 C -0.100 4.100 18 C -0.218 4.218 19 C -0.145 4.145 20 O -0.347 6.347 21 Si 0.589 3.411 22 C -0.101 4.101 23 N -0.132 5.132 24 C -0.164 4.164 25 H 0.080 0.920 26 H 0.092 0.908 27 H 0.101 0.899 28 H 0.087 0.913 29 H 0.099 0.901 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.092 0.908 33 H 0.081 0.919 34 H 0.108 0.892 35 H 0.109 0.891 36 H 0.230 0.770 37 H 0.169 0.831 38 H 0.129 0.871 39 H 0.225 0.775 40 H -0.181 1.181 41 H -0.183 1.183 42 H 0.193 0.807 43 H 0.256 0.744 44 H 0.108 0.892 45 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -2.435 0.136 -4.556 5.168 hybrid contribution -0.148 0.661 -0.813 1.059 sum -2.583 0.798 -5.369 6.012 Atomic orbital electron populations 1.22492 0.93936 1.04601 1.02986 1.22243 0.94442 0.92433 0.82865 1.21870 1.02392 0.92392 1.03290 1.22495 1.01815 1.03040 0.96707 1.86568 1.69525 1.25171 1.45203 1.23260 0.77252 0.80709 0.86779 1.90582 1.35347 1.70072 1.42987 1.22326 1.02999 0.95652 0.92074 0.85115 1.23448 1.00409 0.97949 0.95463 1.22467 0.88813 0.91941 0.94550 0.85496 1.45817 1.17798 1.63306 1.10361 1.17082 0.85754 0.77325 0.81780 1.90881 1.38062 1.54902 1.55861 1.20394 0.89174 1.14309 0.93372 1.21225 0.96055 0.97948 0.94754 1.19911 0.96994 1.09862 0.95065 1.24369 1.04383 0.90420 0.95305 1.86499 1.76402 1.28985 1.42812 0.95144 0.74907 0.85455 0.85594 1.21879 0.95585 1.02113 0.90546 1.41930 1.12331 1.47397 1.11498 1.23365 1.03488 0.94316 0.95220 0.91970 0.90828 0.89939 0.91318 0.90142 0.91372 0.89874 0.90829 0.91872 0.89157 0.89096 0.76993 0.83144 0.87136 0.77547 1.18056 1.18275 0.80736 0.74437 0.89210 0.87980 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.05 8.37 37.16 0.31 0.26 16 2 C 0.12 0.06 1.13 -90.62 -0.10 -0.05 16 3 C -0.14 0.15 8.85 37.15 0.33 0.48 16 4 C -0.18 -0.07 8.37 37.16 0.31 0.24 16 5 O -0.35 -0.49 9.89 -39.26 -0.39 -0.88 16 6 C 0.48 0.43 6.79 36.00 0.24 0.67 16 7 O -0.50 -1.31 11.40 -18.75 -0.21 -1.52 16 8 C -0.11 0.19 4.26 -90.96 -0.39 -0.20 16 9 H 0.13 -0.40 8.14 -51.93 -0.42 -0.82 16 10 C -0.13 0.23 7.43 -25.92 -0.19 0.04 16 11 C 0.13 -0.20 4.24 -67.14 -0.28 -0.48 16 12 H 0.13 -0.06 7.46 -51.93 -0.39 -0.45 16 13 N -0.72 1.08 5.35 -54.34 -0.29 0.79 16 14 C 0.59 1.09 7.79 -12.85 -0.10 0.99 16 15 O -0.52 -3.03 16.48 5.20 0.09 -2.94 16 16 C -0.06 -0.05 7.06 -81.98 -0.58 -0.63 16 17 C -0.07 -0.15 10.59 -39.12 -0.41 -0.56 16 18 C -0.21 -0.01 5.44 -105.02 -0.57 -0.58 16 19 C -0.03 0.00 3.02 36.01 0.11 0.11 16 20 O -0.54 -0.44 12.88 -35.23 -0.45 -0.89 16 21 Si 0.69 -1.22 30.59 -169.99 -5.20 -6.42 16 22 C 0.04 -0.08 10.45 -16.91 -0.18 -0.26 16 23 N -0.54 1.39 5.99 -9.39 -0.06 1.33 16 24 C -0.13 0.30 7.15 -25.94 -0.19 0.11 16 25 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 26 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.08 0.14 5.89 -51.93 -0.31 -0.16 16 28 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 29 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 30 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.08 0.17 5.89 -51.93 -0.31 -0.14 16 32 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 33 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 34 H 0.09 -0.14 8.09 -51.93 -0.42 -0.56 16 35 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 36 H 0.40 -1.64 7.85 -40.82 -0.32 -1.96 16 37 H 0.15 0.47 8.06 -52.48 -0.42 0.04 16 38 H 0.11 0.08 7.96 -51.93 -0.41 -0.33 16 39 H 0.38 -1.20 8.70 45.56 0.40 -0.80 16 40 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 41 H -0.26 -0.05 7.11 56.52 0.40 0.35 16 42 H 0.18 -0.91 6.19 -52.49 -0.32 -1.24 16 43 H 0.42 -2.44 8.19 -40.82 -0.33 -2.78 16 44 H 0.09 -0.26 8.14 -51.93 -0.42 -0.69 16 45 H 0.10 -0.21 7.41 -51.93 -0.38 -0.59 16 LS Contribution 370.84 15.07 5.59 5.59 Total: 0.00 -9.70 370.84 -9.27 -18.96 By element: Atomic # 1 Polarization: -7.52 SS G_CDS: -6.65 Total: -14.17 kcal Atomic # 6 Polarization: 1.83 SS G_CDS: -1.69 Total: 0.14 kcal Atomic # 7 Polarization: 2.47 SS G_CDS: -0.35 Total: 2.12 kcal Atomic # 8 Polarization: -5.26 SS G_CDS: -0.97 Total: -6.23 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.20 Total: -6.42 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -9.70 -9.27 -18.96 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12626394_10543058.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.078 kcal (2) G-P(sol) polarization free energy of solvation -9.698 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.776 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.265 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.963 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.041 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds