Wall clock time and date at job start Sat Mar 6 2021 19:31:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.35530 * 125.67620 * 2 1 4 4 C 1.35458 * 108.87350 * 179.82537 * 3 2 1 5 5 C 1.50697 * 126.07073 * 180.14160 * 4 3 2 6 6 O 1.42899 * 109.47110 * 120.33695 * 5 4 3 7 7 Si 1.86296 * 109.47156 * 0.33781 * 5 4 3 8 8 C 1.39843 * 107.85857 * 0.42949 * 4 3 2 9 9 C 1.37653 * 125.68031 * 180.30075 * 2 1 3 10 10 C 1.46681 * 126.22852 * 0.02586 * 9 2 1 11 11 O 1.21691 * 120.00109 * 4.97717 * 10 9 2 12 12 N 1.34777 * 119.99733 * 184.98208 * 10 9 2 13 13 C 1.46499 * 120.00309 * 185.13361 * 12 10 9 14 14 H 1.09004 * 112.84660 * 23.80173 * 13 12 10 15 15 C 1.53784 * 113.61571 * 154.99426 * 13 12 10 16 16 C 1.53782 * 87.07717 * 139.98625 * 15 13 12 17 17 H 1.08998 * 113.61653 * 89.12160 * 16 15 13 18 18 C 1.50695 * 113.61078 * 219.93633 * 16 15 13 19 19 O 1.20824 * 120.00263 * 359.97438 * 18 16 15 20 20 O 1.34230 * 120.00179 * 180.02562 * 18 16 15 21 21 C 1.45199 * 117.00663 * 180.02562 * 20 18 16 22 22 C 1.53004 * 109.46993 * 59.99710 * 21 20 18 23 23 C 1.52997 * 109.47410 * 180.02562 * 21 20 18 24 24 C 1.52998 * 109.46849 * 300.00263 * 21 20 18 25 25 C 1.53772 * 113.61699 * 252.49601 * 13 12 10 26 26 H 1.08996 * 109.46954 * 264.22413 * 1 2 3 27 27 H 1.08997 * 109.46511 * 144.22600 * 1 2 3 28 28 H 1.08997 * 109.46695 * 24.22886 * 1 2 3 29 29 H 1.08000 * 125.56822 * 359.97438 * 3 2 1 30 30 H 1.09000 * 109.46991 * 240.33277 * 5 4 3 31 31 H 0.96702 * 113.99670 * 300.00273 * 6 5 4 32 32 H 1.48502 * 110.00182 * 58.67911 * 7 5 4 33 33 H 1.48496 * 110.00002 * 179.97438 * 7 5 4 34 34 H 1.08000 * 126.45279 * 179.69930 * 8 4 3 35 35 H 0.97005 * 120.00058 * 5.13264 * 12 10 9 36 36 H 1.09000 * 113.61155 * 254.53166 * 15 13 12 37 37 H 1.08994 * 113.61393 * 25.35261 * 15 13 12 38 38 H 1.08998 * 109.47345 * 60.00326 * 22 21 20 39 39 H 1.08998 * 109.47144 * 180.02562 * 22 21 20 40 40 H 1.09008 * 109.46963 * 300.00598 * 22 21 20 41 41 H 1.08993 * 109.47117 * 59.99634 * 23 21 20 42 42 H 1.09009 * 109.46959 * 180.02562 * 23 21 20 43 43 H 1.08998 * 109.46851 * 299.99627 * 23 21 20 44 44 H 1.09000 * 109.47644 * 59.99182 * 24 21 20 45 45 H 1.09002 * 109.47393 * 180.02562 * 24 21 20 46 46 H 1.09000 * 109.46868 * 299.99434 * 24 21 20 47 47 H 1.09000 * 113.61764 * 334.56769 * 25 13 12 48 48 H 1.09003 * 113.61486 * 105.46432 * 25 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1009 0.0000 4 6 3.5522 0.7094 0.0039 5 6 4.7537 1.6190 0.0083 6 8 5.5405 1.3632 1.1734 7 14 4.1887 3.3941 0.0179 8 6 3.5780 -0.6888 -0.0035 9 6 2.2679 -1.1181 -0.0059 10 6 1.8124 -2.5124 -0.0137 11 8 0.6255 -2.7643 -0.1070 12 7 2.7085 -3.5146 0.0825 13 6 2.2669 -4.9062 -0.0382 14 1 1.3342 -5.0076 -0.5931 15 6 3.3726 -5.8645 -0.5115 16 6 2.8192 -6.8785 0.5036 17 1 2.0371 -7.5202 0.0979 18 6 3.8900 -7.6498 1.2312 19 8 5.0552 -7.4405 0.9896 20 8 3.5494 -8.5701 2.1471 21 6 4.6331 -9.2742 2.8090 22 6 5.5193 -8.2684 3.5467 23 6 4.0542 -10.2755 3.8105 24 6 5.4678 -10.0208 1.7666 25 6 2.2801 -5.6744 1.2938 26 1 -0.3633 -0.1034 1.0224 27 1 -0.3632 -0.8338 -0.6008 28 1 -0.3632 0.9371 -0.4217 29 1 1.9082 2.1236 -0.0004 30 1 5.3532 1.4332 -0.8829 31 1 5.0697 1.5083 2.0055 32 1 3.3438 3.6518 1.2117 33 1 5.3643 4.3013 0.0229 34 1 4.4584 -1.3143 -0.0074 35 1 3.6459 -3.3144 0.2316 36 1 3.2619 -6.1805 -1.5489 37 1 4.3796 -5.5178 -0.2798 38 1 4.9246 -7.7364 4.2893 39 1 6.3330 -8.7969 4.0432 40 1 5.9316 -7.5553 2.8327 41 1 3.4232 -10.9918 3.2846 42 1 4.8679 -10.8037 4.3077 43 1 3.4593 -9.7438 4.5532 44 1 5.8802 -9.3079 1.0527 45 1 6.2812 -10.5498 2.2635 46 1 4.8366 -10.7373 1.2411 47 1 2.9883 -5.2764 2.0204 48 1 1.2875 -5.8369 1.7140 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12626394_10803934.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:31:18 Heat of formation + Delta-G solvation = -76.975828 kcal Electronic energy + Delta-G solvation = -29420.308903 eV Core-core repulsion = 25250.913017 eV Total energy + Delta-G solvation = -4169.395886 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.57843 -42.08901 -40.66733 -39.17485 -37.81980 -37.58449 -35.11521 -34.76838 -33.72370 -30.96698 -28.44921 -28.37508 -28.36317 -27.70031 -26.92065 -25.73555 -24.29698 -22.77904 -21.34489 -21.20929 -20.57208 -20.14491 -18.86687 -18.54455 -17.77837 -17.55928 -17.07177 -16.83396 -16.81123 -16.56135 -16.17242 -15.86070 -15.64701 -15.41579 -15.16313 -15.12256 -14.67865 -14.63008 -14.33916 -13.99541 -13.72787 -13.64344 -13.51188 -13.45759 -13.29253 -13.20130 -13.13300 -12.94183 -12.88215 -12.64212 -12.47225 -12.38065 -12.36819 -12.04805 -11.79225 -11.77979 -11.35549 -11.07092 -10.87070 -10.47235 -10.17880 -9.69696 -9.27468 -4.94635 0.42521 1.20794 1.31907 1.48723 1.55605 1.62581 1.71745 2.00884 2.31387 2.33952 3.16955 3.25457 3.48097 3.57504 3.60279 3.68774 3.72074 3.76326 3.77982 3.89586 3.91089 3.94466 4.16406 4.26838 4.35397 4.38935 4.47788 4.52566 4.54807 4.57633 4.62988 4.68986 4.71080 4.73606 4.76591 4.77349 4.79960 4.85465 4.89289 5.01234 5.06178 5.16448 5.26826 5.28992 5.38685 5.58778 5.65828 5.88507 6.10470 6.41833 6.52340 6.85977 7.13217 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.404 5.404 3 C 0.029 3.971 4 C -0.206 4.206 5 C -0.037 4.037 6 O -0.531 6.531 7 Si 0.679 3.321 8 C -0.111 4.111 9 C -0.056 4.056 10 C 0.594 3.406 11 O -0.545 6.545 12 N -0.708 5.708 13 C 0.129 3.871 14 H 0.124 0.876 15 C -0.126 4.126 16 C -0.111 4.111 17 H 0.130 0.870 18 C 0.476 3.524 19 O -0.500 6.500 20 O -0.348 6.348 21 C 0.116 3.884 22 C -0.183 4.183 23 C -0.142 4.142 24 C -0.184 4.184 25 C -0.133 4.133 26 H 0.078 0.922 27 H 0.103 0.897 28 H 0.088 0.912 29 H 0.174 0.826 30 H 0.115 0.885 31 H 0.374 0.626 32 H -0.260 1.260 33 H -0.258 1.258 34 H 0.146 0.854 35 H 0.406 0.594 36 H 0.089 0.911 37 H 0.104 0.896 38 H 0.061 0.939 39 H 0.073 0.927 40 H 0.083 0.917 41 H 0.067 0.933 42 H 0.080 0.920 43 H 0.067 0.933 44 H 0.083 0.917 45 H 0.073 0.927 46 H 0.062 0.938 47 H 0.091 0.909 48 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.076 0.218 -0.660 2.189 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.076 5.076 3 C -0.108 4.108 4 C -0.213 4.213 5 C -0.148 4.148 6 O -0.337 6.337 7 Si 0.581 3.419 8 C -0.138 4.138 9 C -0.169 4.169 10 C 0.382 3.618 11 O -0.424 6.424 12 N -0.359 5.359 13 C 0.024 3.976 14 H 0.142 0.858 15 C -0.164 4.164 16 C -0.130 4.130 17 H 0.148 0.852 18 C 0.319 3.681 19 O -0.388 6.388 20 O -0.266 6.266 21 C 0.080 3.920 22 C -0.240 4.240 23 C -0.199 4.199 24 C -0.241 4.241 25 C -0.172 4.172 26 H 0.096 0.904 27 H 0.122 0.878 28 H 0.106 0.894 29 H 0.191 0.809 30 H 0.133 0.867 31 H 0.222 0.778 32 H -0.185 1.185 33 H -0.183 1.183 34 H 0.163 0.837 35 H 0.242 0.758 36 H 0.108 0.892 37 H 0.123 0.877 38 H 0.080 0.920 39 H 0.092 0.908 40 H 0.101 0.899 41 H 0.086 0.914 42 H 0.098 0.902 43 H 0.086 0.914 44 H 0.102 0.898 45 H 0.091 0.909 46 H 0.081 0.919 47 H 0.110 0.890 48 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -2.521 0.660 -0.805 2.728 hybrid contribution 0.727 -0.506 1.281 1.557 sum -1.794 0.154 0.475 1.862 Atomic orbital electron populations 1.22342 0.75484 1.05292 1.04506 1.43820 1.07026 1.04699 1.52051 1.21873 0.90104 0.91685 1.07131 1.19741 0.93684 0.94807 1.13067 1.24275 0.92531 1.07272 0.90747 1.86588 1.41233 1.90087 1.15831 0.95391 0.82767 0.75009 0.88755 1.21202 0.94295 0.94649 1.03616 1.20007 0.90293 0.87568 1.19011 1.16993 0.85545 0.83547 0.75697 1.90805 1.16089 1.84870 1.50665 1.45587 1.11386 1.05221 1.73725 1.22451 0.99370 0.78792 0.96942 0.85776 1.23379 0.99928 0.93630 0.99440 1.22321 0.97326 0.95406 0.97994 0.85223 1.23261 0.89810 0.77572 0.77428 1.90590 1.20497 1.64486 1.63223 1.86563 1.40375 1.49086 1.50526 1.22237 0.85591 0.91772 0.92376 1.22495 1.00101 1.00191 1.01261 1.21868 1.02050 0.97985 0.98013 1.22496 1.00450 1.01242 0.99878 1.23442 1.02987 0.93099 0.97682 0.90355 0.87845 0.89370 0.80948 0.86739 0.77842 1.18516 1.18299 0.83671 0.75818 0.89244 0.87745 0.91963 0.90846 0.89866 0.91356 0.90167 0.91393 0.89825 0.90853 0.91918 0.89003 0.89234 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.07 10.49 59.85 0.63 0.56 16 2 N -0.40 -0.30 3.16 -120.24 -0.38 -0.68 16 3 C 0.03 -0.01 9.92 -16.91 -0.17 -0.18 16 4 C -0.21 -0.05 5.44 -105.02 -0.57 -0.62 16 5 C -0.04 0.01 3.02 36.00 0.11 0.12 16 6 O -0.53 -0.71 12.88 -35.23 -0.45 -1.16 16 7 Si 0.68 -0.86 30.59 -169.99 -5.20 -6.06 16 8 C -0.11 -0.08 10.28 -39.12 -0.40 -0.48 16 9 C -0.06 -0.09 6.89 -81.98 -0.56 -0.65 16 10 C 0.59 1.24 7.77 -12.85 -0.10 1.14 16 11 O -0.55 -2.54 14.41 5.20 0.07 -2.46 16 12 N -0.71 0.35 5.33 -54.32 -0.29 0.06 16 13 C 0.13 -0.15 4.21 -67.12 -0.28 -0.43 16 14 H 0.12 -0.06 7.53 -51.93 -0.39 -0.45 16 15 C -0.13 0.22 7.15 -25.92 -0.19 0.04 16 16 C -0.11 0.14 4.26 -90.96 -0.39 -0.25 16 17 H 0.13 -0.36 8.14 -51.93 -0.42 -0.78 16 18 C 0.48 0.68 6.80 36.00 0.24 0.93 16 19 O -0.50 -1.65 11.40 -18.75 -0.21 -1.87 16 20 O -0.35 -0.64 9.89 -39.26 -0.39 -1.03 16 21 C 0.12 0.11 1.13 -90.62 -0.10 0.01 16 22 C -0.18 -0.16 8.37 37.16 0.31 0.16 16 23 C -0.14 0.10 8.85 37.16 0.33 0.43 16 24 C -0.18 -0.16 8.37 37.16 0.31 0.15 16 25 C -0.13 0.17 7.43 -25.92 -0.19 -0.03 16 26 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.10 0.05 6.53 -51.93 -0.34 -0.29 16 28 H 0.09 -0.32 8.12 -51.93 -0.42 -0.74 16 29 H 0.17 -0.55 6.19 -52.49 -0.32 -0.88 16 30 H 0.11 -0.08 7.96 -51.93 -0.41 -0.50 16 31 H 0.37 -0.49 8.70 45.56 0.40 -0.10 16 32 H -0.26 -0.16 7.11 56.52 0.40 0.24 16 33 H -0.26 -0.60 7.11 56.52 0.40 -0.20 16 34 H 0.15 -0.11 7.49 -52.49 -0.39 -0.51 16 35 H 0.41 -0.87 7.67 -40.82 -0.31 -1.18 16 36 H 0.09 -0.22 8.14 -51.93 -0.42 -0.65 16 37 H 0.10 -0.11 7.42 -51.93 -0.39 -0.50 16 38 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 39 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 40 H 0.08 0.21 5.89 -51.92 -0.31 -0.10 16 41 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 42 H 0.08 -0.15 8.14 -51.92 -0.42 -0.58 16 43 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 44 H 0.08 0.21 5.89 -51.93 -0.31 -0.09 16 45 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 46 H 0.06 0.04 8.14 -51.93 -0.42 -0.39 16 47 H 0.09 -0.07 8.10 -51.93 -0.42 -0.49 16 48 H 0.09 -0.11 8.14 -51.93 -0.42 -0.54 16 LS Contribution 389.29 15.07 5.87 5.87 Total: 0.00 -8.40 389.29 -9.47 -17.87 By element: Atomic # 1 Polarization: -3.98 SS G_CDS: -7.46 Total: -11.44 kcal Atomic # 6 Polarization: 1.92 SS G_CDS: -1.02 Total: 0.90 kcal Atomic # 7 Polarization: 0.05 SS G_CDS: -0.67 Total: -0.62 kcal Atomic # 8 Polarization: -5.53 SS G_CDS: -0.98 Total: -6.52 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.20 Total: -6.06 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -8.40 -9.47 -17.87 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12626394_10803934.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.103 kcal (2) G-P(sol) polarization free energy of solvation -8.402 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.505 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.471 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.873 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.976 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds