Wall clock time and date at job start Sat Mar 6 2021 19:31:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.52995 * 109.47250 * 2 1 4 4 C 1.53002 * 109.46874 * 240.00233 * 2 1 3 5 5 O 1.45200 * 109.47614 * 120.00206 * 2 1 3 6 6 C 1.34233 * 116.99942 * 59.99381 * 5 2 1 7 7 O 1.20829 * 119.99910 * 0.02562 * 6 5 2 8 8 C 1.50696 * 119.99960 * 180.02562 * 6 5 2 9 9 H 1.09001 * 112.85153 * 48.80887 * 8 6 5 10 10 C 1.53790 * 113.61323 * 180.02562 * 8 6 5 11 11 C 1.53778 * 87.07854 * 139.98141 * 10 8 6 12 12 H 1.09004 * 113.61409 * 89.20177 * 11 10 8 13 13 N 1.46502 * 113.61404 * 220.01603 * 11 10 8 14 14 C 1.34777 * 119.99880 * 203.47379 * 13 11 10 15 15 O 1.21569 * 120.00346 * 359.97438 * 14 13 11 16 16 C 1.47695 * 119.99611 * 180.02562 * 14 13 11 17 17 C 1.39823 * 120.16452 * 180.02562 * 16 14 13 18 18 F 1.35103 * 120.11221 * 0.02562 * 17 16 14 19 19 C 1.38319 * 119.78021 * 179.97438 * 17 16 14 20 20 C 1.38208 * 120.11591 * 359.72684 * 19 17 16 21 21 C 1.38454 * 120.33762 * 0.55585 * 20 19 17 22 22 C 1.50706 * 119.89311 * 179.71954 * 21 20 19 23 23 O 1.42895 * 109.47147 * 119.72158 * 22 21 20 24 24 Si 1.86299 * 109.46748 * 359.72516 * 22 21 20 25 25 C 1.37856 * 120.21790 * 359.44501 * 21 20 19 26 26 C 1.53780 * 87.17673 * 334.61131 * 11 10 8 27 27 H 1.09004 * 109.46678 * 299.99747 * 1 2 3 28 28 H 1.08998 * 109.47444 * 59.99706 * 1 2 3 29 29 H 1.08999 * 109.47318 * 180.02562 * 1 2 3 30 30 H 1.09005 * 109.47167 * 180.02562 * 3 2 1 31 31 H 1.09002 * 109.47472 * 300.00105 * 3 2 1 32 32 H 1.09004 * 109.47074 * 60.00495 * 3 2 1 33 33 H 1.09004 * 109.46964 * 299.99455 * 4 2 1 34 34 H 1.08992 * 109.47440 * 59.99831 * 4 2 1 35 35 H 1.09005 * 109.47319 * 179.97438 * 4 2 1 36 36 H 1.09001 * 113.61333 * 25.43392 * 10 8 6 37 37 H 1.08998 * 113.68604 * 254.53976 * 10 8 6 38 38 H 0.96995 * 119.99760 * 23.47910 * 13 11 10 39 39 H 1.08003 * 119.94650 * 180.02562 * 19 17 16 40 40 H 1.08003 * 119.83284 * 180.27246 * 20 19 17 41 41 H 1.09001 * 109.46740 * 239.72557 * 22 21 20 42 42 H 0.96695 * 114.00385 * 300.00674 * 23 22 21 43 43 H 1.48493 * 110.00250 * 58.67997 * 24 22 21 44 44 H 1.48504 * 109.99999 * 180.02562 * 24 22 21 45 45 H 1.08003 * 120.06221 * 180.25587 * 25 21 20 46 46 H 1.09001 * 113.61804 * 139.94226 * 26 11 10 47 47 H 1.08999 * 113.61258 * 270.84420 * 26 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0399 -0.7212 -1.2493 5 8 2.0141 -0.6845 1.1855 6 6 1.6533 -1.9684 1.3378 7 8 0.9565 -2.5028 0.5078 8 6 2.1174 -2.7434 2.5440 9 1 1.9534 -2.2087 3.4796 10 6 1.6199 -4.1984 2.5703 11 6 3.0136 -4.5827 3.0943 12 1 3.0951 -4.5528 4.1809 13 7 3.5349 -5.8250 2.5188 14 6 4.4707 -6.5338 3.1809 15 8 4.8826 -6.1420 4.2555 16 6 4.9966 -7.7859 2.6004 17 6 5.9671 -8.5242 3.2845 18 9 6.4273 -8.0951 4.4801 19 6 6.4537 -9.6960 2.7337 20 6 5.9782 -10.1386 1.5139 21 6 5.0215 -9.4084 0.8295 22 6 4.5146 -9.8971 -0.5030 23 8 3.1055 -10.1208 -0.4236 24 14 5.3722 -11.4902 -0.9471 25 6 4.5269 -8.2386 1.3656 26 6 3.5400 -3.3145 2.4019 27 1 -0.3633 0.5138 0.8901 28 1 -0.3634 0.5139 -0.8899 29 1 -0.3634 -1.0276 0.0005 30 1 3.1300 1.4424 -0.0005 31 1 1.6767 1.9564 -0.8900 32 1 1.6767 1.9563 0.8901 33 1 1.6766 -1.7489 -1.2493 34 1 1.6766 -0.2074 -2.1392 35 1 3.1299 -0.7209 -1.2496 36 1 1.3983 -4.6019 1.5823 37 1 0.8194 -4.3745 3.2888 38 1 3.2066 -6.1374 1.6612 39 1 7.2031 -10.2686 3.2601 40 1 6.3581 -11.0565 1.0901 41 1 4.7211 -9.1478 -1.2672 42 1 2.8481 -10.7774 0.2379 43 1 5.1247 -12.5103 0.1032 44 1 4.8816 -11.9823 -2.2595 45 1 3.7776 -7.6730 0.8315 46 1 4.2877 -2.7769 2.9851 47 1 3.8444 -3.4760 1.3678 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12626394_12335834.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:31:37 Heat of formation + Delta-G solvation = -139.405173 kcal Electronic energy + Delta-G solvation = -31246.604375 eV Core-core repulsion = 26697.784763 eV Total energy + Delta-G solvation = -4548.819612 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.156 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -50.01562 -42.22874 -41.40173 -40.29383 -39.29890 -37.75890 -37.56726 -35.17538 -34.76485 -32.59846 -32.24474 -28.43149 -28.35414 -27.95858 -26.87210 -26.64530 -25.49230 -23.73732 -22.67473 -21.71730 -21.14843 -20.41507 -19.23419 -18.68418 -18.36688 -18.28432 -17.64774 -17.30573 -17.10544 -16.96363 -16.72974 -16.26464 -16.18894 -16.01798 -15.80450 -15.69437 -15.29120 -15.06897 -14.68564 -14.66729 -14.42228 -14.34860 -13.74097 -13.63020 -13.58210 -13.42156 -13.21652 -13.13467 -12.98822 -12.91400 -12.86999 -12.65099 -12.46005 -12.44891 -12.30588 -12.05366 -11.77184 -11.73971 -11.43842 -11.23769 -10.97087 -10.65122 -10.43358 -10.15285 -9.83854 -4.88914 -0.51239 -0.04028 1.10660 1.30224 1.56505 1.58366 1.62752 1.99666 2.02656 2.45344 3.03739 3.20154 3.27545 3.32168 3.45418 3.51011 3.58840 3.60782 3.65703 3.70330 3.74772 3.89750 3.94630 4.00198 4.09636 4.42223 4.48721 4.52223 4.53723 4.55161 4.59267 4.61610 4.71039 4.74454 4.77463 4.79370 4.82595 4.82636 4.87663 4.89276 4.94295 5.01983 5.07849 5.13097 5.19963 5.23606 5.37515 5.52645 5.59038 6.30683 6.49374 6.75931 6.99448 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.107 3.893 3 C -0.140 4.140 4 C -0.180 4.180 5 O -0.356 6.356 6 C 0.474 3.526 7 O -0.521 6.521 8 C -0.107 4.107 9 H 0.147 0.853 10 C -0.116 4.116 11 C 0.124 3.876 12 H 0.115 0.885 13 N -0.701 5.701 14 C 0.557 3.443 15 O -0.567 6.567 16 C -0.189 4.189 17 C 0.135 3.865 18 F -0.135 7.135 19 C -0.152 4.152 20 C -0.051 4.051 21 C -0.132 4.132 22 C -0.077 4.077 23 O -0.545 6.545 24 Si 0.763 3.237 25 C -0.026 4.026 26 C -0.128 4.128 27 H 0.063 0.937 28 H 0.085 0.915 29 H 0.064 0.936 30 H 0.068 0.932 31 H 0.094 0.906 32 H 0.068 0.932 33 H 0.065 0.935 34 H 0.085 0.915 35 H 0.063 0.937 36 H 0.101 0.899 37 H 0.099 0.901 38 H 0.414 0.586 39 H 0.168 0.832 40 H 0.168 0.832 41 H 0.135 0.865 42 H 0.388 0.612 43 H -0.277 1.277 44 H -0.307 1.307 45 H 0.155 0.845 46 H 0.090 0.910 47 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.419 -0.907 -4.106 4.438 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.071 3.929 3 C -0.197 4.197 4 C -0.237 4.237 5 O -0.273 6.273 6 C 0.319 3.681 7 O -0.410 6.410 8 C -0.126 4.126 9 H 0.164 0.836 10 C -0.154 4.154 11 C 0.019 3.981 12 H 0.133 0.867 13 N -0.352 5.352 14 C 0.345 3.655 15 O -0.447 6.447 16 C -0.193 4.193 17 C 0.115 3.885 18 F -0.114 7.114 19 C -0.170 4.170 20 C -0.068 4.068 21 C -0.132 4.132 22 C -0.186 4.186 23 O -0.353 6.353 24 Si 0.669 3.331 25 C -0.045 4.045 26 C -0.167 4.167 27 H 0.082 0.918 28 H 0.104 0.896 29 H 0.083 0.917 30 H 0.087 0.913 31 H 0.113 0.887 32 H 0.087 0.913 33 H 0.084 0.916 34 H 0.104 0.896 35 H 0.082 0.918 36 H 0.119 0.881 37 H 0.117 0.883 38 H 0.252 0.748 39 H 0.186 0.814 40 H 0.185 0.815 41 H 0.153 0.847 42 H 0.238 0.762 43 H -0.203 1.203 44 H -0.235 1.235 45 H 0.173 0.827 46 H 0.109 0.891 47 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 1.402 -1.106 -4.213 4.575 hybrid contribution -1.263 -0.014 0.478 1.351 sum 0.139 -1.121 -3.734 3.901 Atomic orbital electron populations 1.22461 0.93948 1.03670 1.03686 1.22438 0.94553 0.93249 0.82642 1.21887 1.02378 0.91352 1.04056 1.22459 1.01773 1.02163 0.97321 1.86572 1.69660 1.25380 1.45718 1.23682 0.76529 0.80530 0.87399 1.90584 1.36063 1.70345 1.44057 1.22443 0.99008 0.95094 0.96101 0.83577 1.23302 0.96592 0.91636 1.03824 1.22474 0.94072 0.82065 0.99513 0.86706 1.45754 1.40829 1.24388 1.24251 1.18327 0.79362 0.83634 0.84150 1.90840 1.59897 1.71052 1.22872 1.20051 1.02657 0.97865 0.98758 1.18195 0.94318 0.94403 0.81600 1.91564 1.87000 1.89616 1.43200 1.21394 1.02955 0.94997 0.97651 1.21386 0.93659 0.99259 0.92499 1.20396 0.98753 0.95797 0.98289 1.25201 0.85477 1.11892 0.96055 1.86598 1.21120 1.64327 1.63296 0.94146 0.88787 0.73770 0.76433 1.21175 0.96767 0.95050 0.91479 1.23429 0.94753 0.95938 1.02568 0.91791 0.89592 0.91684 0.91305 0.88713 0.91284 0.91610 0.89618 0.91789 0.88075 0.88269 0.74769 0.81442 0.81524 0.84702 0.76228 1.20312 1.23497 0.82734 0.89142 0.89080 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.32 8.37 71.98 0.60 0.28 16 2 C 0.11 0.19 1.13 -10.80 -0.01 0.17 16 3 C -0.14 0.29 8.85 71.98 0.64 0.93 16 4 C -0.18 -0.26 8.37 71.98 0.60 0.34 16 5 O -0.36 -1.40 9.89 -51.45 -0.51 -1.91 16 6 C 0.47 1.56 6.80 71.23 0.48 2.04 16 7 O -0.52 -3.75 11.40 21.95 0.25 -3.50 16 8 C -0.11 0.22 4.26 -10.95 -0.05 0.18 16 9 H 0.15 -0.78 8.14 -2.39 -0.02 -0.80 16 10 C -0.12 0.36 7.16 31.12 0.22 0.59 16 11 C 0.12 -0.12 4.21 45.52 0.19 0.08 16 12 H 0.12 0.19 7.50 -2.38 -0.02 0.17 16 13 N -0.70 0.21 5.31 -443.05 -2.35 -2.14 16 14 C 0.56 3.64 7.77 86.74 0.67 4.31 16 15 O -0.57 -8.67 14.96 -3.93 -0.06 -8.73 16 16 C -0.19 -0.54 5.88 -20.05 -0.12 -0.66 16 17 C 0.14 0.61 7.29 22.67 0.17 0.77 16 18 F -0.14 -1.54 15.55 44.97 0.70 -0.84 16 19 C -0.15 0.42 10.01 22.28 0.22 0.64 16 20 C -0.05 0.33 8.66 22.31 0.19 0.53 16 21 C -0.13 0.74 5.39 -19.90 -0.11 0.64 16 22 C -0.08 0.52 2.82 71.24 0.20 0.72 16 23 O -0.55 1.83 12.76 -148.98 -1.90 -0.07 16 24 Si 0.76 -5.37 29.78 68.60 2.04 -3.32 16 25 C -0.03 0.09 9.09 22.52 0.20 0.29 16 26 C -0.13 0.23 7.44 31.18 0.23 0.46 16 27 H 0.06 0.08 8.14 -2.38 -0.02 0.06 16 28 H 0.09 -0.10 8.14 -2.39 -0.02 -0.12 16 29 H 0.06 0.38 5.89 -2.39 -0.01 0.37 16 30 H 0.07 -0.14 8.14 -2.38 -0.02 -0.16 16 31 H 0.09 -0.49 8.14 -2.39 -0.02 -0.50 16 32 H 0.07 -0.14 8.14 -2.38 -0.02 -0.16 16 33 H 0.06 0.35 5.89 -2.38 -0.01 0.34 16 34 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 35 H 0.06 0.06 8.14 -2.38 -0.02 0.04 16 36 H 0.10 -0.22 7.40 -2.39 -0.02 -0.24 16 37 H 0.10 -0.48 8.14 -2.39 -0.02 -0.49 16 38 H 0.41 -2.22 6.74 -92.71 -0.63 -2.84 16 39 H 0.17 -1.16 8.06 -2.91 -0.02 -1.18 16 40 H 0.17 -1.99 4.86 -2.91 -0.01 -2.00 16 41 H 0.14 -1.19 7.96 -2.39 -0.02 -1.21 16 42 H 0.39 -3.31 8.70 -74.06 -0.64 -3.95 16 43 H -0.28 1.00 7.10 99.48 0.71 1.71 16 44 H -0.31 -0.64 7.11 99.48 0.71 0.07 16 45 H 0.16 -1.12 6.41 -2.91 -0.02 -1.14 16 46 H 0.09 -0.13 8.14 -2.39 -0.02 -0.15 16 47 H 0.09 -0.14 8.10 -2.39 -0.02 -0.16 16 Total: 0.00 -23.01 386.28 2.31 -20.70 By element: Atomic # 1 Polarization: -12.30 SS G_CDS: -0.21 Total: -12.51 kcal Atomic # 6 Polarization: 7.96 SS G_CDS: 4.35 Total: 12.31 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: -2.35 Total: -2.14 kcal Atomic # 8 Polarization: -11.98 SS G_CDS: -2.22 Total: -14.20 kcal Atomic # 9 Polarization: -1.54 SS G_CDS: 0.70 Total: -0.84 kcal Atomic # 14 Polarization: -5.37 SS G_CDS: 2.04 Total: -3.32 kcal Total: -23.01 2.31 -20.70 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12626394_12335834.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.703 kcal (2) G-P(sol) polarization free energy of solvation -23.014 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.717 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.312 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.702 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.405 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds