Wall clock time and date at job start Sat Mar 6 2021 19:32:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52996 * 109.47094 * 2 1 4 4 C 1.52993 * 109.47231 * 239.99803 * 2 1 3 5 5 O 1.45200 * 109.46581 * 119.99894 * 2 1 3 6 6 C 1.34225 * 117.00119 * 60.00462 * 5 2 1 7 7 O 1.20822 * 120.00416 * 359.97438 * 6 5 2 8 8 C 1.50703 * 119.99815 * 180.02562 * 6 5 2 9 9 H 1.09008 * 112.84601 * 311.18892 * 8 6 5 10 10 C 1.53780 * 113.69561 * 82.45953 * 8 6 5 11 11 C 1.53777 * 87.08231 * 139.98976 * 10 8 6 12 12 H 1.09006 * 113.68806 * 89.12533 * 11 10 8 13 13 N 1.46496 * 113.61896 * 220.01655 * 11 10 8 14 14 C 1.34770 * 120.00353 * 252.50520 * 13 11 10 15 15 O 1.21568 * 120.00091 * 359.97438 * 14 13 11 16 16 C 1.47698 * 120.00262 * 179.97438 * 14 13 11 17 17 C 1.39799 * 120.15868 * 180.02562 * 16 14 13 18 18 F 1.35101 * 120.08243 * 0.02562 * 17 16 14 19 19 C 1.38305 * 119.83557 * 179.97438 * 17 16 14 20 20 C 1.38188 * 120.14586 * 359.97438 * 19 17 16 21 21 C 1.50700 * 119.84778 * 180.02562 * 20 19 17 22 22 O 1.42904 * 109.46768 * 14.99670 * 21 20 19 23 23 Si 1.86294 * 109.47357 * 134.99904 * 21 20 19 24 24 C 1.38662 * 120.31155 * 0.04427 * 20 19 17 25 25 F 1.35102 * 119.91286 * 179.97438 * 24 20 19 26 26 C 1.38069 * 120.16556 * 359.95909 * 24 20 19 27 27 C 1.53776 * 87.08209 * 334.57061 * 11 10 8 28 28 H 1.09003 * 109.47243 * 300.00246 * 1 2 3 29 29 H 1.09004 * 109.46889 * 59.99820 * 1 2 3 30 30 H 1.08998 * 109.47337 * 180.02562 * 1 2 3 31 31 H 1.09001 * 109.47526 * 180.02562 * 3 2 1 32 32 H 1.09004 * 109.47399 * 299.99867 * 3 2 1 33 33 H 1.08997 * 109.47697 * 59.99728 * 3 2 1 34 34 H 1.09005 * 109.47344 * 300.00051 * 4 2 1 35 35 H 1.09001 * 109.47355 * 60.00246 * 4 2 1 36 36 H 1.08992 * 109.47449 * 180.02562 * 4 2 1 37 37 H 1.09003 * 113.61310 * 25.44096 * 10 8 6 38 38 H 1.08995 * 113.61073 * 254.54243 * 10 8 6 39 39 H 0.97004 * 119.99553 * 72.49391 * 13 11 10 40 40 H 1.07998 * 119.93068 * 180.02562 * 19 17 16 41 41 H 1.09000 * 109.47121 * 255.00671 * 21 20 19 42 42 H 0.96702 * 113.99664 * 60.00254 * 22 21 20 43 43 H 1.48497 * 110.00048 * 58.68241 * 23 21 20 44 44 H 1.48500 * 110.00289 * 180.02562 * 23 21 20 45 45 H 1.07998 * 120.06901 * 180.29736 * 26 24 20 46 46 H 1.09001 * 113.61957 * 139.97845 * 27 11 10 47 47 H 1.09007 * 113.61652 * 270.88236 * 27 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2491 5 8 2.0139 -0.6845 1.1856 6 6 1.6532 -1.9684 1.3379 7 8 0.9560 -2.5026 0.5083 8 6 2.1172 -2.7433 2.5443 9 1 3.1877 -2.6449 2.7245 10 6 1.2573 -2.5089 3.7975 11 6 1.4017 -4.0132 4.0819 12 1 2.2762 -4.2634 4.6827 13 7 0.1729 -4.6372 4.5787 14 6 0.0796 -5.0064 5.8715 15 8 1.0153 -4.8220 6.6254 16 6 -1.1595 -5.6350 6.3724 17 6 -1.2601 -6.0187 7.7130 18 9 -0.2235 -5.8151 8.5552 19 6 -2.4237 -6.6063 8.1751 20 6 -3.4853 -6.8137 7.3151 21 6 -4.7503 -7.4540 7.8259 22 8 -4.7509 -7.4338 9.2548 23 14 -6.2249 -6.5092 7.1908 24 6 -3.3920 -6.4358 5.9842 25 9 -4.4347 -6.6429 5.1504 26 6 -2.2364 -5.8483 5.5092 27 6 1.6192 -4.1980 2.5709 28 1 -0.3634 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 3.1300 1.4425 -0.0005 32 1 1.6767 1.9563 -0.8900 33 1 1.6767 1.9564 0.8899 34 1 1.6767 -1.7490 -1.2492 35 1 1.6767 -0.2075 -2.1392 36 1 3.1299 -0.7217 -1.2490 37 1 0.2352 -2.2028 3.5747 38 1 1.7369 -1.8754 4.5437 39 1 -0.5736 -4.7845 3.9771 40 1 -2.5032 -6.9030 9.2104 41 1 -4.8019 -8.4855 7.4772 42 1 -4.7066 -6.5460 9.6356 43 1 -6.2184 -6.4957 5.7059 44 1 -7.4788 -7.1303 7.6880 45 1 -2.1672 -5.5502 4.4735 46 1 2.3908 -4.9282 2.3268 47 1 0.6960 -4.3537 2.0126 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12626394_12360598.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:32:26 Heat of formation + Delta-G solvation = -171.329317 kcal Electronic energy + Delta-G solvation = -33644.650276 eV Core-core repulsion = 28624.992354 eV Total energy + Delta-G solvation = -5019.657922 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.147 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -50.44143 -50.07908 -42.21596 -41.38113 -40.23203 -39.32041 -37.76274 -37.61447 -35.16629 -34.77018 -32.88330 -31.42451 -28.49940 -28.41951 -28.34017 -27.33520 -26.82918 -24.28256 -24.19849 -22.99854 -21.88753 -21.24327 -20.46048 -19.48717 -19.12676 -18.67785 -18.41829 -17.79297 -17.64571 -17.49626 -17.22613 -17.10757 -16.73873 -16.56179 -16.25826 -16.03448 -15.82521 -15.78845 -15.73776 -15.32878 -15.25070 -14.76987 -14.65492 -14.38578 -14.18040 -13.72052 -13.70638 -13.60592 -13.40964 -13.24711 -13.15007 -12.97736 -12.96147 -12.90103 -12.63227 -12.53224 -12.43301 -12.41816 -12.03046 -11.74293 -11.57101 -11.42397 -11.16239 -11.00048 -10.94755 -10.30102 -10.17073 -9.71720 -5.00369 -0.77895 -0.27498 1.12121 1.14872 1.46788 1.57796 1.65286 1.94951 1.99297 2.28375 2.80581 2.84574 3.13840 3.19459 3.23247 3.31721 3.51461 3.53773 3.61345 3.66923 3.71955 3.76056 3.82436 3.91274 3.97723 4.20151 4.33287 4.40188 4.46825 4.54029 4.56156 4.56959 4.62517 4.65557 4.72246 4.74832 4.76788 4.79411 4.81629 4.83758 4.89618 4.92359 5.02754 5.09047 5.21117 5.24759 5.37663 5.42539 5.54628 6.29038 6.63970 6.77878 6.96906 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.107 3.893 3 C -0.140 4.140 4 C -0.181 4.181 5 O -0.356 6.356 6 C 0.474 3.526 7 O -0.522 6.522 8 C -0.108 4.108 9 H 0.146 0.854 10 C -0.128 4.128 11 C 0.125 3.875 12 H 0.118 0.882 13 N -0.699 5.699 14 C 0.561 3.439 15 O -0.559 6.559 16 C -0.159 4.159 17 C 0.142 3.858 18 F -0.126 7.126 19 C -0.116 4.116 20 C -0.083 4.083 21 C -0.071 4.071 22 O -0.547 6.547 23 Si 0.763 3.237 24 C 0.071 3.929 25 F -0.122 7.122 26 C -0.070 4.070 27 C -0.117 4.117 28 H 0.064 0.936 29 H 0.084 0.916 30 H 0.066 0.934 31 H 0.068 0.932 32 H 0.093 0.907 33 H 0.068 0.932 34 H 0.064 0.936 35 H 0.085 0.915 36 H 0.063 0.937 37 H 0.093 0.907 38 H 0.091 0.909 39 H 0.415 0.585 40 H 0.176 0.824 41 H 0.128 0.872 42 H 0.400 0.600 43 H -0.255 1.255 44 H -0.303 1.303 45 H 0.178 0.822 46 H 0.098 0.902 47 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.749 3.658 -2.017 4.529 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.071 3.929 3 C -0.197 4.197 4 C -0.238 4.238 5 O -0.273 6.273 6 C 0.318 3.682 7 O -0.411 6.411 8 C -0.128 4.128 9 H 0.164 0.836 10 C -0.167 4.167 11 C 0.020 3.980 12 H 0.136 0.864 13 N -0.351 5.351 14 C 0.349 3.651 15 O -0.438 6.438 16 C -0.163 4.163 17 C 0.121 3.879 18 F -0.104 7.104 19 C -0.134 4.134 20 C -0.085 4.085 21 C -0.180 4.180 22 O -0.355 6.355 23 Si 0.667 3.333 24 C 0.051 3.949 25 F -0.101 7.101 26 C -0.089 4.089 27 C -0.155 4.155 28 H 0.083 0.917 29 H 0.103 0.897 30 H 0.084 0.916 31 H 0.087 0.913 32 H 0.112 0.888 33 H 0.087 0.913 34 H 0.083 0.917 35 H 0.103 0.897 36 H 0.082 0.918 37 H 0.111 0.889 38 H 0.110 0.890 39 H 0.254 0.746 40 H 0.193 0.807 41 H 0.145 0.855 42 H 0.251 0.749 43 H -0.180 1.180 44 H -0.231 1.231 45 H 0.195 0.805 46 H 0.116 0.884 47 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -2.031 3.016 -2.330 4.319 hybrid contribution 0.121 -0.653 -0.473 0.815 sum -1.909 2.364 -2.803 4.134 Atomic orbital electron populations 1.22457 0.93862 1.03711 1.03655 1.22427 0.94630 0.93199 0.82596 1.21884 1.02387 0.91394 1.04027 1.22460 1.01785 1.02143 0.97378 1.86571 1.69661 1.25483 1.45613 1.23709 0.76756 0.80584 0.87125 1.90582 1.36252 1.70359 1.43908 1.22423 1.03833 0.95534 0.90994 0.83641 1.23407 1.00592 0.97420 0.95236 1.22487 0.88333 0.92334 0.94863 0.86444 1.45741 1.18499 1.61335 1.09507 1.18087 0.86410 0.77836 0.82800 1.90867 1.40020 1.55959 1.56931 1.19795 0.96188 1.06887 0.93428 1.17927 0.85417 0.97674 0.86879 1.91599 1.56671 1.92158 1.69979 1.20888 0.89634 0.99811 1.03079 1.20471 0.97730 0.98259 0.92007 1.25166 1.00989 1.05769 0.86104 1.86504 1.96575 1.36012 1.16419 0.94279 0.72851 0.87336 0.78865 1.17321 0.86138 1.03464 0.87975 1.91603 1.54250 1.93068 1.71169 1.21277 0.89625 0.96584 1.01464 1.23326 1.03773 0.94175 0.94219 0.91744 0.89708 0.91555 0.91318 0.88784 0.91269 0.91656 0.89663 0.91828 0.88895 0.89031 0.74638 0.80707 0.85490 0.74864 1.18010 1.23119 0.80500 0.88354 0.87961 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.09 8.37 71.98 0.60 0.51 16 2 C 0.11 0.09 1.13 -10.80 -0.01 0.08 16 3 C -0.14 0.39 8.85 71.98 0.64 1.03 16 4 C -0.18 -0.18 8.37 71.98 0.60 0.42 16 5 O -0.36 -1.00 9.89 -51.37 -0.51 -1.51 16 6 C 0.47 0.91 6.80 71.24 0.48 1.40 16 7 O -0.52 -3.06 11.40 21.98 0.25 -2.81 16 8 C -0.11 0.41 4.26 -11.01 -0.05 0.36 16 9 H 0.15 -1.00 8.14 -2.38 -0.02 -1.02 16 10 C -0.13 0.51 7.43 31.12 0.23 0.75 16 11 C 0.12 -0.42 4.24 45.52 0.19 -0.23 16 12 H 0.12 -0.10 7.46 -2.38 -0.02 -0.11 16 13 N -0.70 2.29 5.30 -443.07 -2.35 -0.06 16 14 C 0.56 1.89 7.77 86.74 0.67 2.56 16 15 O -0.56 -6.73 14.94 -3.93 -0.06 -6.79 16 16 C -0.16 -0.04 5.88 -20.06 -0.12 -0.16 16 17 C 0.14 0.32 7.28 22.66 0.17 0.49 16 18 F -0.13 -1.07 15.55 44.97 0.70 -0.37 16 19 C -0.12 0.31 9.20 22.27 0.20 0.52 16 20 C -0.08 0.31 5.14 -19.77 -0.10 0.21 16 21 C -0.07 0.30 2.96 71.24 0.21 0.51 16 22 O -0.55 2.41 11.63 -148.98 -1.73 0.67 16 23 Si 0.76 -3.03 30.81 68.60 2.11 -0.92 16 24 C 0.07 -0.23 6.65 22.33 0.15 -0.08 16 25 F -0.12 0.12 12.80 44.97 0.58 0.70 16 26 C -0.07 0.34 9.51 22.57 0.21 0.56 16 27 C -0.12 0.60 7.16 31.12 0.22 0.82 16 28 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 29 H 0.08 -0.18 8.14 -2.38 -0.02 -0.20 16 30 H 0.07 0.28 5.89 -2.39 -0.01 0.27 16 31 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 32 H 0.09 -0.54 8.14 -2.38 -0.02 -0.55 16 33 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 34 H 0.06 0.33 5.89 -2.38 -0.01 0.31 16 35 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 36 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 37 H 0.09 -0.37 8.10 -2.39 -0.02 -0.39 16 38 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 39 H 0.42 -3.67 6.76 -92.71 -0.63 -4.29 16 40 H 0.18 -0.96 7.06 -2.91 -0.02 -0.98 16 41 H 0.13 -0.44 7.96 -2.39 -0.02 -0.45 16 42 H 0.40 -5.12 8.42 -74.06 -0.62 -5.74 16 43 H -0.25 -0.15 5.26 99.48 0.52 0.37 16 44 H -0.30 -1.20 7.11 99.48 0.71 -0.49 16 45 H 0.18 -1.95 6.41 -2.91 -0.02 -1.97 16 46 H 0.10 -0.63 8.14 -2.39 -0.02 -0.65 16 47 H 0.10 -0.45 7.41 -2.38 -0.02 -0.47 16 Total: 0.00 -21.62 388.47 2.95 -18.68 By element: Atomic # 1 Polarization: -16.98 SS G_CDS: -0.36 Total: -17.34 kcal Atomic # 6 Polarization: 5.43 SS G_CDS: 4.31 Total: 9.74 kcal Atomic # 7 Polarization: 2.29 SS G_CDS: -2.35 Total: -0.06 kcal Atomic # 8 Polarization: -8.39 SS G_CDS: -2.05 Total: -10.43 kcal Atomic # 9 Polarization: -0.94 SS G_CDS: 1.27 Total: 0.33 kcal Atomic # 14 Polarization: -3.03 SS G_CDS: 2.11 Total: -0.92 kcal Total: -21.62 2.95 -18.68 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12626394_12360598.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -152.652 kcal (2) G-P(sol) polarization free energy of solvation -21.624 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -174.276 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.947 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.677 kcal (6) G-S(sol) free energy of system = (1) + (5) -171.329 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds