Wall clock time and date at job start Sat Mar 6 2021 19:33:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46510 * 1 3 3 C 1.34658 * 124.85115 * 2 1 4 4 C 1.36768 * 108.39279 * 180.02562 * 3 2 1 5 5 C 1.47271 * 126.93923 * 180.02562 * 4 3 2 6 6 O 1.21619 * 120.00103 * 180.02562 * 5 4 3 7 7 N 1.34780 * 119.99758 * 0.02562 * 5 4 3 8 8 C 1.46497 * 119.99653 * 180.02562 * 7 5 4 9 9 H 1.09002 * 112.84935 * 334.66222 * 8 7 5 10 10 C 1.53786 * 113.61643 * 105.85894 * 8 7 5 11 11 C 1.54049 * 86.98426 * 140.01639 * 10 8 7 12 12 H 1.09003 * 113.61268 * 89.11946 * 11 10 8 13 13 C 1.50695 * 113.69721 * 220.01168 * 11 10 8 14 14 O 1.20825 * 120.00300 * 97.53141 * 13 11 10 15 15 O 1.34229 * 120.00111 * 277.53764 * 13 11 10 16 16 C 1.45203 * 117.00207 * 179.97438 * 15 13 11 17 17 C 1.52990 * 109.47255 * 59.99858 * 16 15 13 18 18 C 1.53008 * 109.46889 * 179.97438 * 16 15 13 19 19 C 1.52992 * 109.47028 * 299.99632 * 16 15 13 20 20 C 1.53781 * 113.61305 * 203.46742 * 8 7 5 21 21 C 1.46680 * 106.11782 * 0.25622 * 4 3 2 22 22 C 1.34491 * 106.33498 * 359.57334 * 21 4 3 23 23 C 1.50698 * 125.57327 * 180.14618 * 22 21 4 24 24 O 1.42894 * 109.46763 * 210.33497 * 23 22 21 25 25 Si 1.86303 * 109.47067 * 330.33324 * 23 22 21 26 26 H 1.09000 * 109.47016 * 89.97795 * 1 2 3 27 27 H 1.08993 * 109.47025 * 209.97905 * 1 2 3 28 28 H 1.08999 * 109.46751 * 329.98316 * 1 2 3 29 29 H 1.07998 * 125.80071 * 359.97438 * 3 2 1 30 30 H 0.96995 * 120.00200 * 359.97438 * 7 5 4 31 31 H 1.08992 * 113.61675 * 254.61383 * 10 8 7 32 32 H 1.09000 * 113.60973 * 25.51671 * 10 8 7 33 33 H 1.09008 * 109.47242 * 59.99750 * 17 16 15 34 34 H 1.09000 * 109.47212 * 180.02562 * 17 16 15 35 35 H 1.08999 * 109.47132 * 300.00421 * 17 16 15 36 36 H 1.08998 * 109.47003 * 60.00228 * 18 16 15 37 37 H 1.09000 * 109.46871 * 179.97438 * 18 16 15 38 38 H 1.09000 * 109.47095 * 299.99562 * 18 16 15 39 39 H 1.09007 * 109.47256 * 59.99984 * 19 16 15 40 40 H 1.09000 * 109.47088 * 180.02562 * 19 16 15 41 41 H 1.09007 * 109.47519 * 299.99989 * 19 16 15 42 42 H 1.08999 * 113.61567 * 334.48111 * 20 8 7 43 43 H 1.09000 * 113.61379 * 105.30234 * 20 8 7 44 44 H 1.08007 * 126.83574 * 179.73590 * 21 4 3 45 45 H 1.08993 * 109.47419 * 90.33461 * 23 22 21 46 46 H 0.96703 * 114.00104 * 60.00032 * 24 23 22 47 47 H 1.48503 * 109.99906 * 180.02562 * 25 23 22 48 48 H 1.48499 * 109.99933 * 301.32025 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2346 1.1051 0.0000 4 6 3.5462 0.7176 -0.0006 5 6 4.7285 1.5957 -0.0003 6 8 5.8447 1.1127 -0.0013 7 7 4.5735 2.9345 0.0012 8 6 5.7496 3.8080 0.0010 9 1 6.6311 3.3311 0.4295 10 6 6.0133 4.4858 -1.3540 11 6 6.3771 5.7531 -0.5573 12 1 7.4302 5.8081 -0.2814 13 6 5.8683 7.0273 -1.1807 14 8 4.8392 7.5233 -0.7874 15 8 6.5584 7.6112 -2.1730 16 6 6.0086 8.8358 -2.7264 17 6 5.9018 9.8909 -1.6238 18 6 6.9265 9.3506 -3.8371 19 6 4.6186 8.5566 -3.3014 20 6 5.4740 5.2124 0.5637 21 6 3.5375 -0.7492 -0.0073 22 6 2.2447 -1.1198 -0.0005 23 6 1.7397 -2.5397 -0.0006 24 8 0.4806 -2.5973 -0.6738 25 14 2.9646 -3.6343 -0.8795 26 1 -0.3633 0.0004 -1.0277 27 1 -0.3633 -0.8901 0.5135 28 1 -0.3633 0.8898 0.5141 29 1 1.8768 2.1240 -0.0004 30 1 3.6833 3.3197 0.0017 31 1 6.8525 4.0563 -1.9011 32 1 5.1193 4.5975 -1.9676 33 1 6.8922 10.0899 -1.2141 34 1 5.4887 10.8101 -2.0391 35 1 5.2483 9.5244 -0.8322 36 1 7.0029 8.5990 -4.6228 37 1 6.5135 10.2697 -4.2529 38 1 7.9166 9.5497 -3.4271 39 1 3.9649 8.1900 -2.5099 40 1 4.2061 9.4758 -3.7173 41 1 4.6946 7.8048 -4.0871 42 1 4.4329 5.5224 0.4735 43 1 5.8769 5.3685 1.5644 44 1 4.3981 -1.4018 -0.0134 45 1 1.6183 -2.8822 1.0270 46 1 0.5136 -2.3061 -1.5953 47 1 2.4779 -5.0373 -0.8869 48 1 3.1629 -3.1586 -2.2721 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12626394_13287730.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:33:27 Heat of formation + Delta-G solvation = -75.522088 kcal Electronic energy + Delta-G solvation = -29239.005274 eV Core-core repulsion = 25069.672426 eV Total energy + Delta-G solvation = -4169.332847 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.46652 -42.12668 -40.67443 -39.16807 -37.88555 -37.66506 -35.11304 -34.48288 -33.66180 -31.39280 -28.42007 -28.34635 -28.22816 -27.21387 -26.79069 -26.17695 -24.11882 -22.77111 -21.30025 -20.91164 -20.64674 -20.22373 -19.00736 -18.57755 -17.63533 -17.41786 -17.13102 -17.03726 -16.80814 -16.48463 -16.16309 -15.79067 -15.48474 -15.41721 -15.21697 -15.20297 -14.65089 -14.63132 -14.35971 -14.08033 -13.64567 -13.55880 -13.43759 -13.39859 -13.19219 -13.13940 -13.08949 -12.97296 -12.90040 -12.60097 -12.43540 -12.42045 -12.35369 -12.00889 -11.99562 -11.68258 -11.42183 -11.02840 -10.94600 -10.89427 -10.09129 -9.56598 -9.20376 -4.89050 0.73875 1.04206 1.14261 1.46152 1.63067 1.63800 1.81474 2.06945 2.34948 2.55264 3.21117 3.28296 3.36998 3.57343 3.64924 3.71971 3.73518 3.76368 3.87198 3.91600 3.95018 4.01088 4.29213 4.39925 4.46329 4.53251 4.53721 4.55995 4.57415 4.61863 4.67020 4.72079 4.76570 4.77842 4.83187 4.83508 4.91275 4.92344 4.95383 4.99336 5.08665 5.17848 5.21154 5.24808 5.52064 5.56883 5.68005 5.97381 6.22507 6.35117 6.64015 6.78909 7.34660 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.428 5.428 3 C 0.069 3.931 4 C -0.260 4.260 5 C 0.591 3.409 6 O -0.588 6.588 7 N -0.708 5.708 8 C 0.127 3.873 9 H 0.113 0.887 10 C -0.129 4.129 11 C -0.108 4.108 12 H 0.145 0.855 13 C 0.475 3.525 14 O -0.522 6.522 15 O -0.357 6.357 16 C 0.106 3.894 17 C -0.180 4.180 18 C -0.140 4.140 19 C -0.179 4.179 20 C -0.115 4.115 21 C -0.154 4.154 22 C -0.024 4.024 23 C -0.044 4.044 24 O -0.541 6.541 25 Si 0.774 3.226 26 H 0.086 0.914 27 H 0.094 0.906 28 H 0.102 0.898 29 H 0.204 0.796 30 H 0.412 0.588 31 H 0.087 0.913 32 H 0.088 0.912 33 H 0.063 0.937 34 H 0.085 0.915 35 H 0.065 0.935 36 H 0.067 0.933 37 H 0.094 0.906 38 H 0.068 0.932 39 H 0.065 0.935 40 H 0.085 0.915 41 H 0.062 0.938 42 H 0.100 0.900 43 H 0.097 0.903 44 H 0.156 0.844 45 H 0.133 0.867 46 H 0.386 0.614 47 H -0.289 1.289 48 H -0.295 1.295 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.238 2.821 -0.192 4.299 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.102 5.102 3 C -0.069 4.069 4 C -0.270 4.270 5 C 0.381 3.619 6 O -0.469 6.469 7 N -0.359 5.359 8 C 0.022 3.978 9 H 0.131 0.869 10 C -0.168 4.168 11 C -0.128 4.128 12 H 0.163 0.837 13 C 0.319 3.681 14 O -0.411 6.411 15 O -0.274 6.274 16 C 0.071 3.929 17 C -0.237 4.237 18 C -0.197 4.197 19 C -0.237 4.237 20 C -0.153 4.153 21 C -0.178 4.178 22 C -0.133 4.133 23 C -0.154 4.154 24 O -0.349 6.349 25 Si 0.678 3.322 26 H 0.105 0.895 27 H 0.112 0.888 28 H 0.121 0.879 29 H 0.221 0.779 30 H 0.249 0.751 31 H 0.106 0.894 32 H 0.107 0.893 33 H 0.082 0.918 34 H 0.104 0.896 35 H 0.084 0.916 36 H 0.086 0.914 37 H 0.113 0.887 38 H 0.087 0.913 39 H 0.084 0.916 40 H 0.104 0.896 41 H 0.081 0.919 42 H 0.119 0.881 43 H 0.116 0.884 44 H 0.174 0.826 45 H 0.150 0.850 46 H 0.235 0.765 47 H -0.216 1.216 48 H -0.222 1.222 Dipole moment (debyes) X Y Z Total from point charges -3.211 1.872 -0.190 3.722 hybrid contribution -1.197 0.829 -0.799 1.660 sum -4.408 2.700 -0.989 5.263 Atomic orbital electron populations 1.22437 0.74648 1.05886 1.04813 1.43721 1.08013 1.04691 1.53736 1.22383 0.89214 0.93098 1.02188 1.20346 0.92165 0.94029 1.20501 1.17669 0.87823 0.82099 0.74297 1.90749 1.27480 1.76062 1.52605 1.45658 1.10060 1.04897 1.75257 1.22361 0.90125 0.88988 0.96330 0.86938 1.23448 1.03050 0.92726 0.97564 1.22479 1.03671 0.88266 0.98350 0.83717 1.23719 0.81824 0.85625 0.76946 1.90573 1.24911 1.64174 1.61449 1.86575 1.52705 1.39678 1.48447 1.22433 0.94662 0.81565 0.94253 1.22457 1.03009 0.99119 0.99134 1.21886 0.99376 1.02091 0.96326 1.22453 0.95867 1.03670 1.01673 1.23288 1.01136 0.92426 0.98412 1.21828 0.95580 0.93519 1.06897 1.20868 0.90502 0.89735 1.12169 1.24734 0.92578 0.94032 1.04043 1.86558 1.29463 1.88995 1.29846 0.93356 0.84470 0.74546 0.79812 0.89541 0.88771 0.87949 0.77904 0.75144 0.89437 0.89335 0.91794 0.89621 0.91641 0.91374 0.88732 0.91276 0.91560 0.89642 0.91895 0.88115 0.88421 0.82638 0.84956 0.76494 1.21638 1.22186 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.50 9.81 127.77 1.25 0.76 16 2 N -0.43 1.06 3.09 -533.23 -1.65 -0.58 16 3 C 0.07 -0.18 10.83 83.91 0.91 0.72 16 4 C -0.26 -1.01 6.29 -19.04 -0.12 -1.13 16 5 C 0.59 4.04 7.81 86.62 0.68 4.72 16 6 O -0.59 -9.01 16.59 -4.09 -0.07 -9.08 16 7 N -0.71 0.27 5.35 -443.44 -2.37 -2.11 16 8 C 0.13 -0.11 4.21 45.52 0.19 0.08 16 9 H 0.11 0.22 7.50 -2.39 -0.02 0.20 16 10 C -0.13 0.18 7.45 31.21 0.23 0.42 16 11 C -0.11 0.21 4.26 -10.92 -0.05 0.17 16 12 H 0.15 -0.74 8.14 -2.39 -0.02 -0.76 16 13 C 0.47 1.55 6.80 71.23 0.48 2.03 16 14 O -0.52 -3.62 11.40 21.97 0.25 -3.37 16 15 O -0.36 -1.43 9.89 -51.41 -0.51 -1.93 16 16 C 0.11 0.18 1.13 -10.80 -0.01 0.17 16 17 C -0.18 -0.29 8.37 71.98 0.60 0.32 16 18 C -0.14 0.29 8.85 71.98 0.64 0.93 16 19 C -0.18 -0.24 8.37 71.98 0.60 0.36 16 20 C -0.11 0.38 7.15 31.12 0.22 0.60 16 21 C -0.15 -0.63 9.49 23.62 0.22 -0.40 16 22 C -0.02 -0.01 6.14 40.98 0.25 0.24 16 23 C -0.04 0.09 2.87 71.24 0.20 0.29 16 24 O -0.54 1.07 10.32 -148.98 -1.54 -0.46 16 25 Si 0.77 -0.63 31.11 68.60 2.13 1.51 16 26 H 0.09 -0.86 8.14 -2.39 -0.02 -0.88 16 27 H 0.09 -0.59 6.73 -2.39 -0.02 -0.60 16 28 H 0.10 -1.20 8.13 -2.39 -0.02 -1.22 16 29 H 0.20 -2.17 7.45 -2.91 -0.02 -2.20 16 30 H 0.41 -2.52 7.66 -92.71 -0.71 -3.23 16 31 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 32 H 0.09 -0.09 8.10 -2.39 -0.02 -0.11 16 33 H 0.06 0.07 8.14 -2.38 -0.02 0.05 16 34 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 35 H 0.06 0.36 5.89 -2.39 -0.01 0.35 16 36 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 37 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 38 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 39 H 0.07 0.34 5.89 -2.38 -0.01 0.32 16 40 H 0.08 -0.13 8.14 -2.39 -0.02 -0.15 16 41 H 0.06 0.06 8.14 -2.38 -0.02 0.04 16 42 H 0.10 -0.27 7.41 -2.39 -0.02 -0.29 16 43 H 0.10 -0.48 8.14 -2.39 -0.02 -0.50 16 44 H 0.16 0.48 6.88 -2.91 -0.02 0.46 16 45 H 0.13 -0.52 7.96 -2.39 -0.02 -0.54 16 46 H 0.39 -2.44 8.70 -74.06 -0.64 -3.09 16 47 H -0.29 -1.47 7.11 99.48 0.71 -0.77 16 48 H -0.30 -1.62 7.11 99.48 0.71 -0.92 16 Total: 0.00 -22.84 389.64 2.23 -20.61 By element: Atomic # 1 Polarization: -14.53 SS G_CDS: -0.33 Total: -14.86 kcal Atomic # 6 Polarization: 3.96 SS G_CDS: 6.31 Total: 10.27 kcal Atomic # 7 Polarization: 1.33 SS G_CDS: -4.02 Total: -2.69 kcal Atomic # 8 Polarization: -12.98 SS G_CDS: -1.86 Total: -14.84 kcal Atomic # 14 Polarization: -0.63 SS G_CDS: 2.13 Total: 1.51 kcal Total: -22.84 2.23 -20.61 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12626394_13287730.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.913 kcal (2) G-P(sol) polarization free energy of solvation -22.843 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.756 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.234 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.609 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.522 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds