Wall clock time and date at job start Sat Mar 6 2021 19:33:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52995 * 109.47083 * 2 1 4 4 C 1.53002 * 109.46969 * 239.99663 * 2 1 3 5 5 O 1.45197 * 109.46729 * 119.99911 * 2 1 3 6 6 C 1.34231 * 117.00367 * 60.00296 * 5 2 1 7 7 O 1.20823 * 119.99825 * 359.97438 * 6 5 2 8 8 C 1.50703 * 120.00428 * 179.97438 * 6 5 2 9 9 H 1.08998 * 112.84858 * 311.19681 * 8 6 5 10 10 C 1.53784 * 113.61332 * 82.49788 * 8 6 5 11 11 C 1.53781 * 87.07734 * 139.98471 * 10 8 6 12 12 H 1.08999 * 113.69150 * 89.13103 * 11 10 8 13 13 N 1.46503 * 113.61239 * 220.01772 * 11 10 8 14 14 C 1.34775 * 119.99993 * 252.50211 * 13 11 10 15 15 O 1.21591 * 119.99874 * 359.97438 * 14 13 11 16 16 C 1.47538 * 119.99979 * 180.02562 * 14 13 11 17 17 C 1.40140 * 120.18967 * 179.97438 * 16 14 13 18 18 O 1.35649 * 120.15375 * 359.97438 * 17 16 14 19 19 C 1.38715 * 119.69470 * 180.02562 * 17 16 14 20 20 C 1.38048 * 120.08632 * 0.02562 * 19 17 16 21 21 C 1.50695 * 119.80600 * 179.97438 * 20 19 17 22 22 O 1.42902 * 109.47059 * 64.97737 * 21 20 19 23 23 Si 1.86299 * 109.47575 * 184.97714 * 21 20 19 24 24 C 1.38555 * 120.39150 * 359.95552 * 20 19 17 25 25 C 1.37783 * 120.30103 * 0.02562 * 24 20 19 26 26 C 1.53774 * 113.61550 * 179.97438 * 8 6 5 27 27 H 1.09006 * 109.47176 * 300.00055 * 1 2 3 28 28 H 1.08998 * 109.47423 * 59.99943 * 1 2 3 29 29 H 1.09003 * 109.47449 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.46990 * 179.97438 * 3 2 1 31 31 H 1.08991 * 109.47106 * 299.99599 * 3 2 1 32 32 H 1.09006 * 109.47510 * 60.00351 * 3 2 1 33 33 H 1.08997 * 109.47084 * 299.99795 * 4 2 1 34 34 H 1.08995 * 109.46783 * 60.00497 * 4 2 1 35 35 H 1.09000 * 109.46829 * 180.02562 * 4 2 1 36 36 H 1.08995 * 113.61443 * 25.43103 * 10 8 6 37 37 H 1.09002 * 113.61339 * 254.52854 * 10 8 6 38 38 H 0.96998 * 119.99597 * 72.49698 * 13 11 10 39 39 H 0.96703 * 114.00048 * 270.02329 * 18 17 16 40 40 H 1.07993 * 119.95496 * 180.02562 * 19 17 16 41 41 H 1.08997 * 109.47320 * 304.98079 * 21 20 19 42 42 H 0.96704 * 114.00436 * 60.00538 * 22 21 20 43 43 H 1.48499 * 109.99892 * 58.68135 * 23 21 20 44 44 H 1.48502 * 110.00248 * 179.97438 * 23 21 20 45 45 H 1.07996 * 119.84771 * 179.74931 * 24 20 19 46 46 H 1.07999 * 120.04918 * 180.02562 * 25 24 20 47 47 H 1.09004 * 113.60899 * 105.47205 * 26 8 6 48 48 H 1.08996 * 113.69494 * 334.57933 * 26 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0139 -0.6845 1.1856 6 6 1.6533 -1.9684 1.3379 7 8 0.9559 -2.5025 0.5083 8 6 2.1181 -2.7438 2.5437 9 1 3.1887 -2.6455 2.7231 10 6 1.2575 -2.5089 3.7964 11 6 1.4018 -4.0132 4.0812 12 1 2.2758 -4.2633 4.6826 13 7 0.1725 -4.6370 4.5774 14 6 0.0785 -5.0058 5.8703 15 8 1.0140 -4.8213 6.6248 16 6 -1.1593 -5.6345 6.3699 17 6 -1.2612 -6.0201 7.7133 18 8 -0.2218 -5.8175 8.5611 19 6 -2.4295 -6.6108 8.1720 20 6 -3.4858 -6.8177 7.3077 21 6 -4.7519 -7.4605 7.8125 22 8 -5.3701 -6.6037 8.7747 23 14 -5.9189 -7.7376 6.3871 24 6 -3.3891 -6.4375 5.9788 25 6 -2.2363 -5.8491 5.5063 26 6 1.6195 -4.1982 2.5706 27 1 -0.3634 0.5139 0.8900 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3634 -1.0277 0.0005 30 1 3.1300 1.4424 0.0005 31 1 1.6767 1.9562 -0.8899 32 1 1.6767 1.9564 0.8900 33 1 1.6766 -1.7490 -1.2491 34 1 1.6767 -0.2075 -2.1392 35 1 3.1299 -0.7217 -1.2490 36 1 0.2356 -2.2027 3.5730 37 1 1.7367 -1.8753 4.5428 38 1 -0.5736 -4.7844 3.9755 39 1 0.4017 -6.5556 8.6024 40 1 -2.5127 -6.9092 9.2065 41 1 -4.5132 -8.4168 8.2779 42 1 -5.6104 -5.7330 8.4292 43 1 -5.2757 -8.6013 5.3646 44 1 -7.1713 -8.3716 6.8717 45 1 -4.2193 -6.6073 5.3094 46 1 -2.1654 -5.5540 4.4698 47 1 2.3910 -4.9287 2.3271 48 1 0.6966 -4.3552 2.0124 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12626394_13422076.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:33:53 Heat of formation + Delta-G solvation = -138.542818 kcal Electronic energy + Delta-G solvation = -30806.114134 eV Core-core repulsion = 26408.103700 eV Total energy + Delta-G solvation = -4398.010434 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -42.19039 -41.60681 -40.44755 -39.20992 -38.37329 -37.59909 -37.17365 -35.09153 -34.58642 -32.65238 -31.14634 -28.40003 -28.38434 -28.28904 -27.11712 -26.91004 -24.02500 -23.97631 -22.87934 -21.62615 -21.23941 -20.40023 -19.40298 -18.67202 -18.61168 -18.22307 -17.60826 -17.15236 -17.04633 -16.70338 -16.32690 -16.25307 -16.17235 -16.04815 -15.66111 -15.26381 -15.20612 -15.03165 -14.72961 -14.63392 -14.25225 -13.89006 -13.75172 -13.67751 -13.47774 -13.30501 -13.15827 -12.96066 -12.92143 -12.89753 -12.65160 -12.49019 -12.39786 -12.33454 -12.18733 -12.06189 -11.79989 -11.69538 -11.37355 -10.94012 -10.81776 -10.56047 -10.21999 -10.07897 -9.81917 -5.14365 -0.44590 0.06819 1.15023 1.18642 1.52203 1.59432 1.72224 1.87557 2.09504 2.52966 3.07641 3.15856 3.23686 3.32810 3.41434 3.56136 3.57257 3.61187 3.69412 3.70617 3.76336 3.87507 3.92103 3.95834 4.17204 4.30302 4.38215 4.45857 4.51105 4.52440 4.53056 4.55894 4.65233 4.68534 4.72090 4.74706 4.79164 4.83536 4.87783 4.92395 4.98674 5.04741 5.09646 5.16309 5.24652 5.26923 5.40029 5.49497 5.57043 6.39281 6.44331 6.67955 6.83865 7.16618 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C 0.116 3.884 3 C -0.142 4.142 4 C -0.183 4.183 5 O -0.348 6.348 6 C 0.477 3.523 7 O -0.501 6.501 8 C -0.111 4.111 9 H 0.130 0.870 10 C -0.133 4.133 11 C 0.127 3.873 12 H 0.125 0.875 13 N -0.718 5.718 14 C 0.561 3.439 15 O -0.516 6.516 16 C -0.166 4.166 17 C 0.174 3.826 18 O -0.476 6.476 19 C -0.129 4.129 20 C -0.076 4.076 21 C -0.074 4.074 22 O -0.536 6.536 23 Si 0.690 3.310 24 C -0.135 4.135 25 C -0.065 4.065 26 C -0.126 4.126 27 H 0.062 0.938 28 H 0.073 0.927 29 H 0.082 0.918 30 H 0.067 0.933 31 H 0.080 0.920 32 H 0.067 0.933 33 H 0.083 0.917 34 H 0.073 0.927 35 H 0.062 0.938 36 H 0.091 0.909 37 H 0.089 0.911 38 H 0.401 0.599 39 H 0.398 0.602 40 H 0.140 0.860 41 H 0.118 0.882 42 H 0.381 0.619 43 H -0.255 1.255 44 H -0.253 1.253 45 H 0.136 0.864 46 H 0.134 0.866 47 H 0.088 0.912 48 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.512 0.999 -3.863 4.267 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.240 4.240 2 C 0.080 3.920 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.265 6.265 6 C 0.320 3.680 7 O -0.389 6.389 8 C -0.131 4.131 9 H 0.148 0.852 10 C -0.172 4.172 11 C 0.022 3.978 12 H 0.143 0.857 13 N -0.370 5.370 14 C 0.348 3.652 15 O -0.392 6.392 16 C -0.169 4.169 17 C 0.127 3.873 18 O -0.287 6.287 19 C -0.148 4.148 20 C -0.077 4.077 21 C -0.185 4.185 22 O -0.342 6.342 23 Si 0.592 3.408 24 C -0.152 4.152 25 C -0.083 4.083 26 C -0.164 4.164 27 H 0.081 0.919 28 H 0.092 0.908 29 H 0.101 0.899 30 H 0.086 0.914 31 H 0.098 0.902 32 H 0.086 0.914 33 H 0.101 0.899 34 H 0.092 0.908 35 H 0.081 0.919 36 H 0.110 0.890 37 H 0.108 0.892 38 H 0.237 0.763 39 H 0.257 0.743 40 H 0.158 0.842 41 H 0.135 0.865 42 H 0.228 0.772 43 H -0.180 1.180 44 H -0.177 1.177 45 H 0.153 0.847 46 H 0.152 0.848 47 H 0.107 0.893 48 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -1.651 0.428 -3.571 3.957 hybrid contribution 0.357 -0.571 -0.227 0.711 sum -1.294 -0.143 -3.797 4.014 Atomic orbital electron populations 1.22493 0.93898 1.04648 1.02985 1.22239 0.94477 0.92407 0.82863 1.21869 1.02361 0.92426 1.03283 1.22494 1.01782 1.03059 0.96724 1.86568 1.69541 1.25205 1.45186 1.23269 0.77267 0.80694 0.86784 1.90583 1.35322 1.70069 1.42962 1.22327 1.02924 0.95687 0.92122 0.85221 1.23446 1.00458 0.97973 0.95356 1.22437 0.88944 0.91989 0.94440 0.85735 1.45861 1.17768 1.62906 1.10496 1.18079 0.87045 0.78076 0.81950 1.90838 1.38887 1.53911 1.55544 1.20412 0.95790 1.06400 0.94328 1.18510 0.88839 0.93029 0.86913 1.84764 1.36245 1.45561 1.62135 1.21354 0.92504 0.99823 1.01079 1.20459 0.96145 0.97495 0.93563 1.25180 0.95324 0.96026 1.01936 1.86540 1.80158 1.29374 1.38097 0.94700 0.79398 0.89082 0.77666 1.20928 0.98388 1.00905 0.94999 1.21155 0.91907 0.96147 0.99123 1.23363 1.03497 0.94224 0.95320 0.91940 0.90849 0.89890 0.91358 0.90161 0.91360 0.89859 0.90845 0.91915 0.89031 0.89195 0.76304 0.74348 0.84188 0.86505 0.77155 1.18014 1.17738 0.84670 0.84795 0.89346 0.87874 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.06 8.37 37.16 0.31 0.25 16 2 C 0.12 0.07 1.13 -90.62 -0.10 -0.03 16 3 C -0.14 0.14 8.85 37.16 0.33 0.47 16 4 C -0.18 -0.09 8.37 37.16 0.31 0.22 16 5 O -0.35 -0.53 9.89 -39.26 -0.39 -0.92 16 6 C 0.48 0.50 6.79 36.01 0.24 0.75 16 7 O -0.50 -1.39 11.40 -18.75 -0.21 -1.60 16 8 C -0.11 0.16 4.26 -90.96 -0.39 -0.22 16 9 H 0.13 -0.37 8.14 -51.93 -0.42 -0.79 16 10 C -0.13 0.19 7.43 -25.92 -0.19 0.00 16 11 C 0.13 -0.17 4.24 -67.14 -0.28 -0.45 16 12 H 0.12 -0.04 7.46 -51.93 -0.39 -0.43 16 13 N -0.72 0.81 5.30 -54.07 -0.29 0.52 16 14 C 0.56 1.03 7.76 -12.47 -0.10 0.94 16 15 O -0.52 -2.76 14.76 -16.59 -0.24 -3.01 16 16 C -0.17 -0.11 5.89 -104.84 -0.62 -0.73 16 17 C 0.17 0.27 6.72 -38.69 -0.26 0.01 16 18 O -0.48 -1.18 11.58 -40.52 -0.47 -1.65 16 19 C -0.13 -0.05 9.60 -39.48 -0.38 -0.43 16 20 C -0.08 0.07 5.35 -104.58 -0.56 -0.49 16 21 C -0.07 0.10 2.79 36.00 0.10 0.20 16 22 O -0.54 0.27 12.83 -35.23 -0.45 -0.18 16 23 Si 0.69 -1.58 29.78 -169.99 -5.06 -6.64 16 24 C -0.13 0.29 8.64 -39.63 -0.34 -0.05 16 25 C -0.06 0.13 9.54 -39.20 -0.37 -0.25 16 26 C -0.13 0.27 7.15 -25.94 -0.19 0.08 16 27 H 0.06 0.01 8.14 -51.93 -0.42 -0.42 16 28 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 29 H 0.08 0.15 5.89 -51.93 -0.31 -0.15 16 30 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 32 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.08 0.18 5.89 -51.93 -0.31 -0.13 16 34 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 35 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 36 H 0.09 -0.12 8.09 -51.93 -0.42 -0.54 16 37 H 0.09 -0.11 8.14 -51.93 -0.42 -0.54 16 38 H 0.40 -1.40 6.76 -40.82 -0.28 -1.68 16 39 H 0.40 -0.49 9.06 45.56 0.41 -0.08 16 40 H 0.14 0.03 8.06 -52.49 -0.42 -0.39 16 41 H 0.12 -0.12 7.96 -51.93 -0.41 -0.54 16 42 H 0.38 -1.65 8.70 45.56 0.40 -1.25 16 43 H -0.26 0.04 7.11 56.52 0.40 0.44 16 44 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 45 H 0.14 -0.60 4.87 -52.49 -0.26 -0.86 16 46 H 0.13 -0.65 6.40 -52.49 -0.34 -0.98 16 47 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 48 H 0.10 -0.18 7.41 -51.93 -0.39 -0.57 16 LS Contribution 390.63 15.07 5.89 5.89 Total: 0.00 -9.90 390.63 -9.84 -19.74 By element: Atomic # 1 Polarization: -6.28 SS G_CDS: -6.12 Total: -12.41 kcal Atomic # 6 Polarization: 2.75 SS G_CDS: -2.49 Total: 0.26 kcal Atomic # 7 Polarization: 0.81 SS G_CDS: -0.29 Total: 0.52 kcal Atomic # 8 Polarization: -5.60 SS G_CDS: -1.77 Total: -7.36 kcal Atomic # 14 Polarization: -1.58 SS G_CDS: -5.06 Total: -6.64 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -9.90 -9.84 -19.74 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12626394_13422076.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.799 kcal (2) G-P(sol) polarization free energy of solvation -9.904 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.703 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.840 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.744 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.543 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds