Wall clock time and date at job start Sat Mar 6 2021 19:33:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.37779 * 119.85221 * 2 1 4 4 C 1.39705 * 119.91283 * 179.97438 * 3 2 1 5 5 C 1.47533 * 120.19456 * 180.02562 * 4 3 2 6 6 O 1.21586 * 120.00344 * 179.97438 * 5 4 3 7 7 N 1.34783 * 119.99808 * 359.97438 * 5 4 3 8 8 C 1.46503 * 119.99664 * 179.97438 * 7 5 4 9 9 H 1.08990 * 112.85384 * 336.20039 * 8 7 5 10 10 C 1.53788 * 113.60999 * 107.50827 * 8 7 5 11 11 C 1.53785 * 87.07690 * 139.97773 * 10 8 7 12 12 H 1.09000 * 113.61010 * 89.11723 * 11 10 8 13 13 C 1.50702 * 113.68722 * 220.00575 * 11 10 8 14 14 O 1.20820 * 119.99986 * 97.53826 * 13 11 10 15 15 O 1.34233 * 120.00051 * 277.53388 * 13 11 10 16 16 C 1.45197 * 116.99996 * 180.02562 * 15 13 11 17 17 C 1.53000 * 109.47187 * 60.00424 * 16 15 13 18 18 C 1.53003 * 109.46762 * 180.02562 * 16 15 13 19 19 C 1.53001 * 109.47263 * 300.00176 * 16 15 13 20 20 C 1.53775 * 87.08187 * 334.56666 * 11 10 8 21 21 C 1.40143 * 119.61612 * 0.02562 * 4 3 2 22 22 O 1.35652 * 120.15089 * 179.97438 * 21 4 3 23 23 C 1.38702 * 119.69815 * 359.97438 * 21 4 3 24 24 C 1.50694 * 119.95966 * 180.02562 * 23 21 4 25 25 O 1.42901 * 109.47118 * 74.99946 * 24 23 21 26 26 Si 1.86298 * 109.47775 * 195.00191 * 24 23 21 27 27 C 1.38058 * 120.08696 * 0.28115 * 23 21 4 28 28 H 1.09000 * 109.47446 * 90.00502 * 1 2 3 29 29 H 1.09006 * 109.47507 * 209.99975 * 1 2 3 30 30 H 1.08999 * 109.47598 * 330.00024 * 1 2 3 31 31 H 1.08008 * 120.04422 * 359.97438 * 3 2 1 32 32 H 0.96997 * 120.00171 * 0.02562 * 7 5 4 33 33 H 1.08998 * 113.61010 * 254.52386 * 10 8 7 34 34 H 1.08996 * 113.61213 * 25.43222 * 10 8 7 35 35 H 1.08998 * 109.46954 * 59.99506 * 17 16 15 36 36 H 1.08996 * 109.46819 * 179.97438 * 17 16 15 37 37 H 1.08995 * 109.46664 * 299.99844 * 17 16 15 38 38 H 1.09000 * 109.47115 * 60.00115 * 18 16 15 39 39 H 1.09004 * 109.46682 * 180.02562 * 18 16 15 40 40 H 1.08997 * 109.47479 * 299.99660 * 18 16 15 41 41 H 1.08999 * 109.46746 * 59.99584 * 19 16 15 42 42 H 1.08996 * 109.47376 * 180.02562 * 19 16 15 43 43 H 1.09007 * 109.46999 * 300.00123 * 19 16 15 44 44 H 1.09001 * 113.61179 * 270.87913 * 20 11 10 45 45 H 1.09001 * 113.68705 * 139.99670 * 20 11 10 46 46 H 0.96696 * 113.99960 * 270.02250 * 22 21 4 47 47 H 1.09004 * 109.47407 * 315.00303 * 24 23 21 48 48 H 0.96708 * 114.00246 * 180.02562 * 25 24 23 49 49 H 1.48506 * 109.99834 * 300.00486 * 26 24 23 50 50 H 1.48502 * 110.00011 * 61.31751 * 26 24 23 51 51 H 1.07999 * 119.80722 * 179.70589 * 27 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1928 1.1950 0.0000 4 6 3.5898 1.1965 0.0005 5 6 4.3305 2.4724 0.0011 6 8 5.5463 2.4696 0.0021 7 7 3.6592 3.6412 0.0006 8 6 4.3947 4.9082 0.0017 9 1 5.4015 4.8129 0.4082 10 6 4.3389 5.6540 -1.3420 11 6 4.1899 6.9496 -0.5270 12 1 5.1413 7.4132 -0.2662 13 6 3.2053 7.9262 -1.1170 14 8 2.0728 7.9697 -0.6981 15 8 3.5864 8.7477 -2.1078 16 6 2.5857 9.6624 -2.6274 17 6 2.0959 10.5756 -1.5018 18 6 3.2004 10.5110 -3.7423 19 6 1.4061 8.8640 -3.1862 20 6 3.5989 6.0819 0.5966 21 6 4.2837 -0.0212 0.0005 22 8 5.6401 -0.0324 0.0005 23 6 3.5771 -1.2147 0.0005 24 6 4.3172 -2.5274 0.0011 25 8 4.8544 -2.7708 1.3027 26 14 3.1447 -3.9018 -0.4537 27 6 2.1966 -1.2018 -0.0053 28 1 -0.3634 -0.0001 -1.0276 29 1 -0.3634 -0.8900 0.5138 30 1 -0.3634 0.8900 0.5138 31 1 1.6510 2.1294 -0.0004 32 1 2.6893 3.6435 0.0002 33 1 5.2675 5.6000 -1.9102 34 1 3.4607 5.4110 -1.9401 35 1 2.9363 11.1443 -1.1037 36 1 1.3450 11.2625 -1.8921 37 1 1.6580 9.9707 -0.7079 38 1 3.5490 9.8601 -4.5441 39 1 2.4492 11.1980 -4.1321 40 1 4.0409 11.0798 -3.3447 41 1 0.9682 8.2591 -2.3922 42 1 0.6551 9.5506 -3.5767 43 1 1.7551 8.2134 -3.9882 44 1 2.5183 5.9559 0.5284 45 1 3.9290 6.3724 1.5939 46 1 6.0334 -0.0353 -0.8828 47 1 5.1290 -2.4872 -0.7252 48 1 5.3454 -3.6006 1.3768 49 1 2.0332 -3.9672 0.5290 50 1 2.6035 -3.6771 -1.8182 51 1 1.6510 -2.1338 -0.0101 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12626394_13422088.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:33:57 Heat of formation + Delta-G solvation = -140.792976 kcal Electronic energy + Delta-G solvation = -33182.826299 eV Core-core repulsion = 28629.180672 eV Total energy + Delta-G solvation = -4553.645627 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -42.19024 -41.67401 -40.49072 -39.14602 -38.04084 -37.65981 -37.46497 -35.09421 -34.60712 -33.23532 -32.68391 -28.40014 -28.38634 -28.00223 -27.64738 -26.93600 -26.78451 -25.19631 -23.12885 -21.90003 -21.50474 -21.12620 -20.34127 -19.51788 -18.63051 -18.42735 -18.24054 -17.67968 -17.40995 -17.06687 -16.73025 -16.52025 -16.28690 -15.91476 -15.79151 -15.36520 -15.18566 -15.14203 -14.93772 -14.66123 -14.64655 -14.48407 -14.27242 -13.75271 -13.73646 -13.63126 -13.47086 -13.22590 -13.15954 -12.98636 -12.96352 -12.90257 -12.75570 -12.64607 -12.48027 -12.44581 -12.38643 -12.06064 -11.98928 -11.79450 -11.66140 -11.37691 -10.92789 -10.75506 -10.30278 -10.23034 -10.05408 -9.55888 -5.05538 -0.37928 0.02067 1.18599 1.19133 1.55067 1.59642 1.72668 1.86614 2.11303 2.53084 3.10929 3.16660 3.25099 3.28611 3.50214 3.54370 3.57892 3.62334 3.70123 3.75885 3.79489 3.87861 3.92242 3.96657 4.04505 4.19779 4.32699 4.42370 4.47180 4.50518 4.51445 4.52555 4.53626 4.55439 4.65419 4.69030 4.71603 4.75103 4.79265 4.83128 4.87253 4.88219 4.92256 5.01057 5.04370 5.13742 5.24103 5.26348 5.26818 5.41455 5.52829 5.56882 6.41266 6.64045 6.74362 6.83937 7.19033 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.165 4.165 5 C 0.563 3.437 6 O -0.515 6.515 7 N -0.718 5.718 8 C 0.127 3.873 9 H 0.125 0.875 10 C -0.133 4.133 11 C -0.111 4.111 12 H 0.130 0.870 13 C 0.477 3.523 14 O -0.501 6.501 15 O -0.348 6.348 16 C 0.116 3.884 17 C -0.183 4.183 18 C -0.142 4.142 19 C -0.183 4.183 20 C -0.126 4.126 21 C 0.193 3.807 22 O -0.465 6.465 23 C -0.108 4.108 24 C -0.063 4.063 25 O -0.538 6.538 26 Si 0.684 3.316 27 C -0.081 4.081 28 H 0.076 0.924 29 H 0.070 0.930 30 H 0.073 0.927 31 H 0.133 0.867 32 H 0.401 0.599 33 H 0.089 0.911 34 H 0.090 0.910 35 H 0.062 0.938 36 H 0.073 0.927 37 H 0.083 0.917 38 H 0.067 0.933 39 H 0.080 0.920 40 H 0.068 0.932 41 H 0.082 0.918 42 H 0.073 0.927 43 H 0.061 0.939 44 H 0.102 0.898 45 H 0.089 0.911 46 H 0.393 0.607 47 H 0.072 0.928 48 H 0.382 0.618 49 H -0.249 1.249 50 H -0.253 1.253 51 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.770 -1.696 -3.469 4.248 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.097 4.097 3 C -0.085 4.085 4 C -0.168 4.168 5 C 0.351 3.649 6 O -0.390 6.390 7 N -0.370 5.370 8 C 0.022 3.978 9 H 0.143 0.857 10 C -0.172 4.172 11 C -0.130 4.130 12 H 0.148 0.852 13 C 0.320 3.680 14 O -0.389 6.389 15 O -0.265 6.265 16 C 0.080 3.920 17 C -0.241 4.241 18 C -0.199 4.199 19 C -0.240 4.240 20 C -0.164 4.164 21 C 0.146 3.854 22 O -0.275 6.275 23 C -0.109 4.109 24 C -0.173 4.173 25 O -0.344 6.344 26 Si 0.585 3.415 27 C -0.099 4.099 28 H 0.094 0.906 29 H 0.089 0.911 30 H 0.092 0.908 31 H 0.151 0.849 32 H 0.236 0.764 33 H 0.108 0.892 34 H 0.109 0.891 35 H 0.081 0.919 36 H 0.092 0.908 37 H 0.101 0.899 38 H 0.086 0.914 39 H 0.098 0.902 40 H 0.087 0.913 41 H 0.101 0.899 42 H 0.092 0.908 43 H 0.080 0.920 44 H 0.121 0.879 45 H 0.107 0.893 46 H 0.251 0.749 47 H 0.090 0.910 48 H 0.229 0.771 49 H -0.174 1.174 50 H -0.178 1.178 51 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -2.393 -1.284 -2.876 3.955 hybrid contribution -0.406 0.786 -0.537 1.034 sum -2.799 -0.498 -3.413 4.441 Atomic orbital electron populations 1.20839 0.89952 1.03594 1.02980 1.19769 0.96835 0.92165 1.00914 1.21123 0.92184 0.98226 0.96999 1.20366 0.93906 0.93467 1.09083 1.18016 0.87310 0.83286 0.76328 1.90832 1.12901 1.87232 1.48062 1.45856 1.10141 1.05135 1.75913 1.22449 0.97983 0.81214 0.96160 0.85673 1.23445 1.04187 0.91990 0.97577 1.22323 0.99266 0.92896 0.98544 0.85191 1.23271 0.88160 0.79419 0.77169 1.90583 1.21064 1.67599 1.59659 1.86568 1.44079 1.46943 1.48916 1.22240 0.87278 0.88314 0.94167 1.22492 1.02230 0.99973 0.99361 1.21869 1.01876 0.99280 0.96892 1.22492 0.97805 1.01398 1.02320 1.23371 1.01818 0.93075 0.98182 1.18177 0.83934 0.89564 0.93698 1.84805 1.13979 1.95859 1.32902 1.19716 0.93291 0.93867 1.04022 1.24516 1.03467 1.00017 0.89337 1.86554 1.74394 1.45281 1.28184 0.95125 0.80428 0.86072 0.79865 1.21016 0.93004 0.98139 0.97721 0.90571 0.91121 0.90768 0.84930 0.76353 0.89212 0.89110 0.91894 0.90847 0.89856 0.91378 0.90165 0.91343 0.89906 0.90848 0.91978 0.87922 0.89275 0.74853 0.90967 0.77100 1.17389 1.17784 0.85318 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.19 10.00 36.00 0.36 0.55 16 2 C -0.10 -0.06 5.87 -104.67 -0.61 -0.68 16 3 C -0.07 -0.02 9.18 -39.20 -0.36 -0.38 16 4 C -0.16 -0.42 5.89 -104.85 -0.62 -1.04 16 5 C 0.56 1.76 7.76 -12.47 -0.10 1.66 16 6 O -0.51 -3.26 14.76 -16.59 -0.24 -3.51 16 7 N -0.72 -0.01 5.31 -54.06 -0.29 -0.29 16 8 C 0.13 -0.07 4.24 -67.11 -0.28 -0.35 16 9 H 0.13 0.07 7.46 -51.93 -0.39 -0.32 16 10 C -0.13 0.15 7.43 -25.91 -0.19 -0.05 16 11 C -0.11 0.11 4.26 -90.96 -0.39 -0.28 16 12 H 0.13 -0.31 8.14 -51.93 -0.42 -0.74 16 13 C 0.48 0.70 6.80 36.01 0.24 0.94 16 14 O -0.50 -1.63 11.40 -18.75 -0.21 -1.84 16 15 O -0.35 -0.63 9.89 -39.27 -0.39 -1.02 16 16 C 0.12 0.10 1.13 -90.62 -0.10 0.00 16 17 C -0.18 -0.15 8.37 37.16 0.31 0.16 16 18 C -0.14 0.11 8.85 37.16 0.33 0.44 16 19 C -0.18 -0.12 8.37 37.16 0.31 0.19 16 20 C -0.13 0.17 7.15 -25.92 -0.19 -0.02 16 21 C 0.19 0.68 6.69 -38.70 -0.26 0.43 16 22 O -0.46 -1.80 10.91 -40.53 -0.44 -2.24 16 23 C -0.11 -0.29 5.30 -104.52 -0.55 -0.84 16 24 C -0.06 -0.03 2.37 36.00 0.09 0.05 16 25 O -0.54 -0.84 12.86 -35.23 -0.45 -1.30 16 26 Si 0.68 -0.88 30.18 -169.99 -5.13 -6.01 16 27 C -0.08 -0.15 8.31 -39.53 -0.33 -0.48 16 28 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 29 H 0.07 -0.12 8.09 -51.93 -0.42 -0.54 16 30 H 0.07 -0.20 8.08 -51.93 -0.42 -0.62 16 31 H 0.13 -0.35 6.40 -52.48 -0.34 -0.69 16 32 H 0.40 -0.88 6.76 -40.82 -0.28 -1.15 16 33 H 0.09 -0.10 8.14 -51.93 -0.42 -0.53 16 34 H 0.09 -0.08 8.10 -51.93 -0.42 -0.50 16 35 H 0.06 0.04 8.14 -51.93 -0.42 -0.39 16 36 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 37 H 0.08 0.21 5.89 -51.93 -0.31 -0.10 16 38 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 39 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 40 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 41 H 0.08 0.18 5.89 -51.93 -0.31 -0.12 16 42 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 43 H 0.06 0.02 8.14 -51.92 -0.42 -0.40 16 44 H 0.10 -0.09 7.41 -51.93 -0.38 -0.48 16 45 H 0.09 -0.16 8.14 -51.93 -0.42 -0.59 16 46 H 0.39 -0.05 9.06 45.56 0.41 0.36 16 47 H 0.07 -0.08 7.83 -51.93 -0.41 -0.49 16 48 H 0.38 -1.39 8.74 45.56 0.40 -0.99 16 49 H -0.25 -0.35 6.75 56.52 0.38 0.04 16 50 H -0.25 -0.23 7.11 56.52 0.40 0.18 16 51 H 0.13 0.14 4.86 -52.49 -0.26 -0.11 16 LS Contribution 411.27 15.07 6.20 6.20 Total: 0.00 -10.64 411.27 -10.28 -20.91 By element: Atomic # 1 Polarization: -4.25 SS G_CDS: -6.97 Total: -11.23 kcal Atomic # 6 Polarization: 2.67 SS G_CDS: -2.34 Total: 0.32 kcal Atomic # 7 Polarization: -0.01 SS G_CDS: -0.29 Total: -0.29 kcal Atomic # 8 Polarization: -8.17 SS G_CDS: -1.74 Total: -9.91 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.13 Total: -6.01 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -10.64 -10.28 -20.91 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12626394_13422088.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.880 kcal (2) G-P(sol) polarization free energy of solvation -10.636 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.517 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.276 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.913 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.793 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds