Wall clock time and date at job start Sat Mar 6 2021 19:34:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.37866 * 126.45779 * 2 1 4 4 C 1.46682 * 126.23385 * 359.97250 * 3 2 1 5 5 O 1.21698 * 119.99743 * 359.71065 * 4 3 2 6 6 N 1.34772 * 120.00054 * 179.71234 * 4 3 2 7 7 C 1.46498 * 120.00115 * 179.97438 * 6 4 3 8 8 H 1.09000 * 112.84469 * 23.80678 * 7 6 4 9 9 C 1.53779 * 113.61403 * 154.99972 * 7 6 4 10 10 C 1.53781 * 87.08153 * 140.06958 * 9 7 6 11 11 H 1.08995 * 113.61694 * 89.19647 * 10 9 7 12 12 C 1.50698 * 113.61672 * 220.01987 * 10 9 7 13 13 O 1.20826 * 119.99663 * 359.97438 * 12 10 9 14 14 O 1.34229 * 120.00486 * 179.97438 * 12 10 9 15 15 C 1.45194 * 117.00073 * 179.97438 * 14 12 10 16 16 C 1.52997 * 109.47339 * 60.00344 * 15 14 12 17 17 C 1.53006 * 109.47359 * 300.00060 * 15 14 12 18 18 C 1.52999 * 109.46968 * 180.02562 * 15 14 12 19 19 C 1.53778 * 113.69199 * 252.53813 * 7 6 4 20 20 N 1.37651 * 107.53123 * 179.70360 * 3 2 1 21 21 C 1.35526 * 108.64672 * 0.26775 * 20 3 2 22 22 C 1.50700 * 125.56326 * 180.02562 * 21 20 3 23 23 O 1.42901 * 109.47600 * 64.99990 * 22 21 20 24 24 Si 1.86303 * 109.47011 * 184.99880 * 22 21 20 25 25 C 1.35450 * 108.87352 * 359.97438 * 21 20 3 26 26 H 1.08993 * 109.47520 * 89.99665 * 1 2 3 27 27 H 1.09000 * 109.46830 * 209.99801 * 1 2 3 28 28 H 1.09000 * 109.46631 * 329.99270 * 1 2 3 29 29 H 0.97003 * 119.99906 * 0.02562 * 6 4 3 30 30 H 1.09000 * 113.61615 * 25.52006 * 9 7 6 31 31 H 1.08999 * 113.61416 * 254.61335 * 9 7 6 32 32 H 1.09002 * 109.47153 * 59.99705 * 16 15 14 33 33 H 1.09001 * 109.46832 * 299.99896 * 16 15 14 34 34 H 1.09004 * 109.47261 * 179.97438 * 16 15 14 35 35 H 1.08993 * 109.46955 * 180.02562 * 17 15 14 36 36 H 1.09000 * 109.47050 * 300.00254 * 17 15 14 37 37 H 1.09001 * 109.47002 * 59.99988 * 17 15 14 38 38 H 1.09002 * 109.46716 * 299.99800 * 18 15 14 39 39 H 1.09000 * 109.47486 * 59.99718 * 18 15 14 40 40 H 1.09001 * 109.47362 * 180.02562 * 18 15 14 41 41 H 1.09002 * 113.61687 * 105.46185 * 19 7 6 42 42 H 1.08999 * 113.61477 * 334.55261 * 19 7 6 43 43 H 0.97003 * 125.67543 * 180.28756 * 20 3 2 44 44 H 1.09000 * 109.46976 * 304.99116 * 22 21 20 45 45 H 0.96701 * 114.00043 * 59.98926 * 23 22 21 46 46 H 1.48492 * 110.00333 * 58.67691 * 24 22 21 47 47 H 1.48496 * 110.00106 * 180.02562 * 24 22 21 48 48 H 1.08006 * 126.07181 * 179.97438 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8899 2.5092 -0.0006 5 8 0.7027 2.7766 -0.0064 6 7 2.8037 3.4999 0.0054 7 6 2.3679 4.8985 0.0042 8 1 1.3623 5.0287 0.4043 9 6 3.4005 5.8660 0.6063 10 6 3.0224 6.8447 -0.5180 11 1 2.1968 7.5079 -0.2603 12 6 4.2022 7.5784 -1.1018 13 8 5.3140 7.3688 -0.6777 14 8 4.0180 8.4648 -2.0928 15 6 5.1995 9.1346 -2.6062 16 6 6.1748 8.0945 -3.1611 17 6 5.8746 9.9152 -1.4766 18 6 4.7942 10.1003 -3.7215 19 6 2.5948 5.6154 -1.3372 20 7 3.6284 0.6624 0.0068 21 6 3.6218 -0.6929 0.0049 22 6 4.8434 -1.5753 0.0112 23 8 5.5555 -1.3944 1.2369 24 14 4.3231 -3.3572 -0.1474 25 6 2.3380 -1.1248 -0.0024 26 1 -0.3634 0.0001 -1.0276 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3632 0.8899 0.5140 29 1 3.7500 3.2867 0.0096 30 1 4.4267 5.5039 0.5433 31 1 3.1365 6.2220 1.6021 32 1 5.6939 7.5384 -3.9658 33 1 6.4635 7.4068 -2.3662 34 1 7.0616 8.5974 -3.5469 35 1 6.7613 10.4183 -1.8622 36 1 5.1798 10.6562 -1.0813 37 1 6.1634 9.2275 -0.6818 38 1 4.3130 9.5445 -4.5262 39 1 4.0995 10.8413 -3.3259 40 1 5.6812 10.6028 -4.1072 41 1 1.6805 5.7691 -1.9103 42 1 3.4008 5.1848 -1.9314 43 1 4.4191 1.2243 0.0123 44 1 5.4881 -1.3092 -0.8264 45 1 5.0415 -1.6128 2.0263 46 1 3.5540 -3.5519 -1.4026 47 1 5.5187 -4.2378 -0.1419 48 1 2.0136 -2.1550 -0.0058 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12626394_13940406.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:34:17 Heat of formation + Delta-G solvation = -89.663343 kcal Electronic energy + Delta-G solvation = -29422.102880 eV Core-core repulsion = 25252.156822 eV Total energy + Delta-G solvation = -4169.946058 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.62216 -42.13317 -40.70839 -39.23684 -37.82240 -37.63318 -35.14536 -34.73250 -33.38522 -31.65091 -28.42385 -28.40315 -28.32557 -28.04059 -26.98823 -26.54401 -23.69302 -22.34937 -21.63789 -21.32793 -20.60395 -20.16681 -19.45592 -18.64707 -18.10649 -17.61628 -17.11500 -16.89185 -16.69004 -16.36302 -16.21793 -15.86722 -15.39287 -15.28930 -15.24306 -14.82490 -14.65773 -14.58682 -14.31108 -13.93286 -13.76924 -13.63642 -13.58363 -13.48928 -13.46562 -13.17261 -12.98482 -12.92303 -12.91523 -12.67829 -12.51577 -12.42547 -12.18095 -12.08656 -12.02600 -11.83293 -11.39771 -11.03710 -10.90886 -10.72888 -10.23805 -9.82549 -9.17352 -5.07125 0.34788 1.10509 1.15873 1.51818 1.56387 1.63021 1.83350 2.05648 2.15281 2.32395 3.12040 3.20568 3.27688 3.50399 3.52805 3.56251 3.67934 3.73993 3.75329 3.87036 3.90885 4.14474 4.16349 4.32888 4.38879 4.42465 4.48323 4.48943 4.53791 4.64638 4.69960 4.71955 4.73794 4.75452 4.81339 4.83885 4.85014 4.95176 5.02414 5.02948 5.21375 5.22176 5.24909 5.30435 5.44445 5.54352 5.64695 5.89903 6.21940 6.36521 6.40322 6.81125 7.10218 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.062 4.062 3 C -0.058 4.058 4 C 0.593 3.407 5 O -0.520 6.520 6 N -0.723 5.723 7 C 0.128 3.872 8 H 0.127 0.873 9 C -0.126 4.126 10 C -0.111 4.111 11 H 0.131 0.869 12 C 0.476 3.524 13 O -0.502 6.502 14 O -0.348 6.348 15 C 0.116 3.884 16 C -0.183 4.183 17 C -0.183 4.183 18 C -0.142 4.142 19 C -0.134 4.134 20 N -0.524 5.524 21 C 0.027 3.973 22 C -0.056 4.056 23 O -0.543 6.543 24 Si 0.721 3.279 25 C -0.200 4.200 26 H 0.069 0.931 27 H 0.066 0.934 28 H 0.081 0.919 29 H 0.396 0.604 30 H 0.101 0.899 31 H 0.089 0.911 32 H 0.061 0.939 33 H 0.082 0.918 34 H 0.073 0.927 35 H 0.073 0.927 36 H 0.062 0.938 37 H 0.082 0.918 38 H 0.067 0.933 39 H 0.068 0.932 40 H 0.080 0.920 41 H 0.090 0.910 42 H 0.089 0.911 43 H 0.416 0.584 44 H 0.114 0.886 45 H 0.384 0.616 46 H -0.253 1.253 47 H -0.253 1.253 48 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.453 -0.358 0.688 0.898 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.071 4.071 3 C -0.171 4.171 4 C 0.381 3.619 5 O -0.395 6.395 6 N -0.373 5.373 7 C 0.023 3.977 8 H 0.145 0.855 9 C -0.164 4.164 10 C -0.130 4.130 11 H 0.149 0.851 12 C 0.320 3.680 13 O -0.389 6.389 14 O -0.265 6.265 15 C 0.080 3.920 16 C -0.240 4.240 17 C -0.241 4.241 18 C -0.199 4.199 19 C -0.172 4.172 20 N -0.121 5.121 21 C -0.091 4.091 22 C -0.166 4.166 23 O -0.348 6.348 24 Si 0.620 3.380 25 C -0.225 4.225 26 H 0.087 0.913 27 H 0.085 0.915 28 H 0.100 0.900 29 H 0.230 0.770 30 H 0.120 0.880 31 H 0.108 0.892 32 H 0.080 0.920 33 H 0.101 0.899 34 H 0.092 0.908 35 H 0.092 0.908 36 H 0.081 0.919 37 H 0.101 0.899 38 H 0.086 0.914 39 H 0.087 0.913 40 H 0.099 0.901 41 H 0.109 0.891 42 H 0.108 0.892 43 H 0.254 0.746 44 H 0.132 0.868 45 H 0.232 0.768 46 H -0.177 1.177 47 H -0.178 1.178 48 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 0.574 -0.602 -0.102 0.838 hybrid contribution 1.368 1.018 -0.382 1.748 sum 1.942 0.416 -0.484 2.044 Atomic orbital electron populations 1.20398 0.88793 1.03302 1.02557 1.19949 0.96063 0.90318 1.00750 1.20214 0.83574 0.93483 1.19840 1.17060 0.85873 0.82995 0.75938 1.90841 1.15834 1.83144 1.49724 1.45838 1.09302 1.05915 1.76280 1.22460 1.00223 0.78807 0.96210 0.85482 1.23374 1.00719 0.94147 0.98206 1.22325 0.96271 0.95886 0.98532 0.85117 1.23270 0.90523 0.77085 0.77170 1.90587 1.26024 1.62878 1.59459 1.86566 1.39200 1.51745 1.48965 1.22242 0.83265 0.92223 0.94252 1.22494 0.99378 0.99834 1.02329 1.22496 1.01297 1.00953 0.99316 1.21870 1.02794 0.98381 0.96884 1.23445 1.03111 0.93130 0.97563 1.41867 1.07148 1.06611 1.56468 1.21111 0.96890 0.83297 1.07846 1.24961 0.92203 1.09245 0.90180 1.86505 1.42051 1.91143 1.15141 0.94006 0.82827 0.73353 0.87776 1.20607 0.90767 0.99079 1.12029 0.91261 0.91501 0.89997 0.77020 0.88012 0.89218 0.91979 0.89937 0.90821 0.90831 0.91873 0.89872 0.91377 0.91313 0.90148 0.89090 0.89208 0.74642 0.86846 0.76836 1.17686 1.17806 0.83145 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.13 9.83 36.01 0.35 0.22 16 2 C -0.06 -0.12 6.21 -104.16 -0.65 -0.76 16 3 C -0.06 -0.09 7.06 -81.98 -0.58 -0.67 16 4 C 0.59 1.25 7.79 -12.85 -0.10 1.15 16 5 O -0.52 -2.65 14.40 5.19 0.07 -2.58 16 6 N -0.72 0.58 5.35 -54.33 -0.29 0.29 16 7 C 0.13 -0.15 4.24 -67.12 -0.28 -0.44 16 8 H 0.13 -0.05 7.46 -51.93 -0.39 -0.44 16 9 C -0.13 0.23 7.16 -25.92 -0.19 0.05 16 10 C -0.11 0.15 4.26 -90.96 -0.39 -0.24 16 11 H 0.13 -0.37 8.14 -51.93 -0.42 -0.79 16 12 C 0.48 0.63 6.79 36.00 0.24 0.87 16 13 O -0.50 -1.58 11.40 -18.75 -0.21 -1.79 16 14 O -0.35 -0.60 9.89 -39.26 -0.39 -0.99 16 15 C 0.12 0.10 1.13 -90.62 -0.10 -0.01 16 16 C -0.18 -0.13 8.37 37.16 0.31 0.18 16 17 C -0.18 -0.14 8.37 37.16 0.31 0.18 16 18 C -0.14 0.11 8.85 37.16 0.33 0.44 16 19 C -0.13 0.18 7.43 -25.92 -0.19 -0.01 16 20 N -0.52 0.33 5.99 -5.70 -0.03 0.30 16 21 C 0.03 -0.01 6.46 -81.96 -0.53 -0.54 16 22 C -0.06 0.09 3.08 36.01 0.11 0.20 16 23 O -0.54 0.68 12.88 -35.23 -0.45 0.22 16 24 Si 0.72 -1.55 30.56 -169.99 -5.19 -6.74 16 25 C -0.20 -0.03 9.27 -39.98 -0.37 -0.40 16 26 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 27 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 28 H 0.08 0.24 6.49 -51.93 -0.34 -0.10 16 29 H 0.40 -1.14 7.86 -40.82 -0.32 -1.46 16 30 H 0.10 -0.13 7.41 -51.93 -0.38 -0.51 16 31 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 32 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 33 H 0.08 0.19 5.89 -51.93 -0.31 -0.12 16 34 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 35 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 36 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 37 H 0.08 0.20 5.89 -51.93 -0.31 -0.10 16 38 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 39 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 41 H 0.09 -0.12 8.14 -51.93 -0.42 -0.55 16 42 H 0.09 -0.09 8.09 -51.93 -0.42 -0.51 16 43 H 0.42 -1.17 8.19 -40.82 -0.33 -1.50 16 44 H 0.11 -0.16 7.96 -51.93 -0.41 -0.58 16 45 H 0.38 -1.81 8.70 45.56 0.40 -1.41 16 46 H -0.25 -0.12 7.11 56.52 0.40 0.28 16 47 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 48 H 0.15 -0.29 6.19 -52.48 -0.32 -0.62 16 LS Contribution 388.82 15.07 5.86 5.86 Total: 0.00 -8.31 388.82 -9.77 -18.08 By element: Atomic # 1 Polarization: -5.47 SS G_CDS: -7.41 Total: -12.88 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -1.72 Total: 0.23 kcal Atomic # 7 Polarization: 0.91 SS G_CDS: -0.32 Total: 0.59 kcal Atomic # 8 Polarization: -4.16 SS G_CDS: -0.98 Total: -5.14 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: -5.19 Total: -6.74 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -8.31 -9.77 -18.08 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12626394_13940406.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.581 kcal (2) G-P(sol) polarization free energy of solvation -8.315 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.896 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.767 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.082 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.663 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds