Wall clock time and date at job start Sat Mar 6 2021 19:36:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.33819 * 122.44967 * 2 1 4 4 C 1.50700 * 124.51889 * 0.02562 * 3 2 1 5 5 O 1.42902 * 109.47206 * 113.31867 * 4 3 2 6 6 Si 1.86305 * 109.46812 * 233.31445 * 4 3 2 7 7 S 1.70610 * 110.95502 * 179.73554 * 3 2 1 8 8 C 1.75828 * 91.56458 * 0.24824 * 7 3 2 9 9 C 1.46581 * 125.46112 * 180.02562 * 8 7 3 10 10 O 1.21704 * 119.99999 * 179.97438 * 9 8 7 11 11 N 1.34771 * 119.99776 * 359.97428 * 9 8 7 12 12 C 1.46509 * 119.99977 * 179.97438 * 11 9 8 13 13 H 1.08991 * 112.84788 * 23.80244 * 12 11 9 14 14 C 1.53782 * 113.61403 * 155.00201 * 12 11 9 15 15 C 1.53781 * 87.08148 * 139.97969 * 14 12 11 16 16 H 1.09003 * 113.60985 * 89.11504 * 15 14 12 17 17 C 1.50701 * 113.61340 * 219.93312 * 15 14 12 18 18 O 1.20820 * 120.00351 * 359.97438 * 17 15 14 19 19 O 1.34232 * 119.99420 * 180.02562 * 17 15 14 20 20 C 1.45204 * 116.99537 * 179.97438 * 19 17 15 21 21 C 1.53005 * 109.46841 * 59.99874 * 20 19 17 22 22 C 1.52998 * 109.47097 * 179.97438 * 20 19 17 23 23 C 1.53000 * 109.47243 * 299.99959 * 20 19 17 24 24 C 1.53780 * 113.61348 * 252.49872 * 12 11 9 25 25 C 1.36647 * 109.08433 * 359.97438 * 8 7 3 26 26 H 1.09004 * 109.47196 * 84.89037 * 1 2 3 27 27 H 1.08999 * 109.46880 * 204.88837 * 1 2 3 28 28 H 1.09007 * 109.46985 * 324.89005 * 1 2 3 29 29 H 1.08997 * 109.47324 * 353.31492 * 4 3 2 30 30 H 0.96705 * 113.99873 * 59.99574 * 5 4 3 31 31 H 1.48497 * 109.99915 * 179.97438 * 6 4 3 32 32 H 1.48498 * 110.00100 * 301.32254 * 6 4 3 33 33 H 0.96996 * 120.00696 * 359.97438 * 11 9 8 34 34 H 1.09001 * 113.61295 * 254.53028 * 14 12 11 35 35 H 1.08997 * 113.61781 * 25.42901 * 14 12 11 36 36 H 1.08997 * 109.47124 * 60.00185 * 21 20 19 37 37 H 1.09007 * 109.47126 * 179.97438 * 21 20 19 38 38 H 1.08999 * 109.47401 * 299.99934 * 21 20 19 39 39 H 1.09001 * 109.47022 * 60.00111 * 22 20 19 40 40 H 1.08997 * 109.47067 * 180.02562 * 22 20 19 41 41 H 1.09006 * 109.47217 * 300.00032 * 22 20 19 42 42 H 1.08999 * 109.47045 * 60.00038 * 23 20 19 43 43 H 1.08997 * 109.47086 * 179.97438 * 23 20 19 44 44 H 1.09001 * 109.47082 * 300.00015 * 23 20 19 45 45 H 1.09002 * 113.61799 * 334.56176 * 24 12 11 46 46 H 1.09001 * 113.61819 * 105.47003 * 24 12 11 47 47 H 1.08002 * 123.35678 * 180.02562 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6354 2.5161 0.0006 5 8 1.9403 3.1629 1.2378 6 14 2.3577 3.4985 -1.4081 7 16 3.8969 0.7893 0.0074 8 6 3.5937 -0.9427 0.0028 9 6 4.6231 -1.9862 0.0064 10 8 4.3001 -3.1596 0.0032 11 7 5.9272 -1.6462 0.0133 12 6 6.9561 -2.6892 0.0174 13 1 6.6012 -3.6355 -0.3906 14 6 8.3008 -2.2303 -0.5709 15 6 8.9769 -3.0287 0.5563 16 1 9.1750 -4.0686 0.2965 17 6 10.1751 -2.3356 1.1520 18 8 10.5175 -1.2549 0.7344 19 8 10.8627 -2.9197 2.1460 20 6 12.0060 -2.1948 2.6712 21 6 11.5432 -0.8469 3.2280 22 6 12.6577 -3.0111 3.7891 23 6 13.0212 -1.9623 1.5504 24 6 7.6837 -2.8314 1.3647 25 6 2.2447 -1.1601 -0.0034 26 1 -0.3634 0.0915 -1.0236 27 1 -0.3633 -0.9322 0.4325 28 1 -0.3633 0.8407 0.5911 29 1 0.5540 2.4512 -0.1187 30 1 2.8874 3.2553 1.4104 31 1 1.7839 4.8680 -1.4190 32 1 3.8351 3.5672 -1.2744 33 1 6.1847 -0.7111 0.0154 34 1 8.4997 -2.6266 -1.5666 35 1 8.4632 -1.1547 -0.5022 36 1 10.8200 -1.0125 4.0264 37 1 12.4014 -0.3028 3.6227 38 1 11.0786 -0.2651 2.4319 39 1 12.9873 -3.9716 3.3928 40 1 13.5157 -2.4668 4.1836 41 1 11.9343 -3.1764 4.5875 42 1 12.5566 -1.3805 0.7543 43 1 13.8792 -1.4177 1.9446 44 1 13.3508 -2.9225 1.1537 45 1 7.6774 -1.9201 1.9627 46 1 7.3844 -3.7129 1.9317 47 1 1.8019 -2.1452 -0.0067 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12626394_6739946.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:36:18 Heat of formation + Delta-G solvation = -101.553090 kcal Electronic energy + Delta-G solvation = -28952.299013 eV Core-core repulsion = 24808.189394 eV Total energy + Delta-G solvation = -4144.109619 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.138 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.17143 -41.06220 -40.02409 -39.22172 -37.77646 -37.56940 -35.10390 -34.57044 -32.45313 -29.92190 -28.40634 -28.38895 -28.28876 -26.97142 -26.45608 -24.52307 -23.13913 -21.84532 -21.26206 -20.44660 -20.21943 -19.36499 -18.68203 -17.85312 -17.62186 -17.40292 -17.06033 -16.83912 -16.38383 -16.14143 -15.95335 -15.83179 -15.37811 -15.27067 -14.89605 -14.72434 -14.63714 -14.36726 -14.06592 -13.77459 -13.69936 -13.52793 -13.47871 -13.22424 -13.16721 -13.09590 -12.96613 -12.90343 -12.68975 -12.52602 -12.47479 -12.41273 -12.32827 -12.07681 -11.83185 -11.80306 -11.37956 -11.13906 -10.98678 -10.90032 -10.24472 -9.73785 -9.50805 -5.12120 -0.67757 0.25460 0.66631 1.02786 1.17550 1.24387 1.43338 1.57715 1.81515 2.04574 2.11393 3.13506 3.13951 3.21674 3.45428 3.53004 3.57366 3.66930 3.69824 3.75793 3.87434 3.92101 4.05392 4.14844 4.36028 4.38769 4.42938 4.44040 4.50542 4.50812 4.55431 4.64576 4.66120 4.71599 4.73742 4.76698 4.77760 4.83143 4.86721 4.93625 4.97346 5.04227 5.22729 5.24194 5.26597 5.33085 5.33905 5.56194 6.14895 6.28680 6.83123 7.03356 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.101 4.101 2 C -0.093 4.093 3 C -0.227 4.227 4 C -0.043 4.043 5 O -0.522 6.522 6 Si 0.673 3.327 7 S 0.185 5.815 8 C -0.259 4.259 9 C 0.595 3.405 10 O -0.522 6.522 11 N -0.717 5.717 12 C 0.127 3.873 13 H 0.128 0.872 14 C -0.126 4.126 15 C -0.111 4.111 16 H 0.131 0.869 17 C 0.477 3.523 18 O -0.501 6.501 19 O -0.348 6.348 20 C 0.116 3.884 21 C -0.183 4.183 22 C -0.142 4.142 23 C -0.183 4.183 24 C -0.134 4.134 25 C -0.042 4.042 26 H 0.078 0.922 27 H 0.072 0.928 28 H 0.072 0.928 29 H 0.131 0.869 30 H 0.374 0.626 31 H -0.240 1.240 32 H -0.243 1.243 33 H 0.400 0.600 34 H 0.090 0.910 35 H 0.103 0.897 36 H 0.061 0.939 37 H 0.073 0.927 38 H 0.082 0.918 39 H 0.068 0.932 40 H 0.080 0.920 41 H 0.067 0.933 42 H 0.083 0.917 43 H 0.073 0.927 44 H 0.062 0.938 45 H 0.091 0.909 46 H 0.091 0.909 47 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.657 0.646 -1.307 1.599 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C -0.106 4.106 3 C -0.346 4.346 4 C -0.154 4.154 5 O -0.328 6.328 6 Si 0.571 3.429 7 S 0.454 5.546 8 C -0.379 4.379 9 C 0.382 3.618 10 O -0.400 6.400 11 N -0.368 5.368 12 C 0.022 3.978 13 H 0.146 0.854 14 C -0.164 4.164 15 C -0.130 4.130 16 H 0.149 0.851 17 C 0.320 3.680 18 O -0.389 6.389 19 O -0.265 6.265 20 C 0.080 3.920 21 C -0.240 4.240 22 C -0.199 4.199 23 C -0.241 4.241 24 C -0.173 4.173 25 C -0.076 4.076 26 H 0.096 0.904 27 H 0.091 0.909 28 H 0.091 0.909 29 H 0.149 0.851 30 H 0.222 0.778 31 H -0.164 1.164 32 H -0.167 1.167 33 H 0.235 0.765 34 H 0.109 0.891 35 H 0.121 0.879 36 H 0.080 0.920 37 H 0.092 0.908 38 H 0.101 0.899 39 H 0.087 0.913 40 H 0.098 0.902 41 H 0.086 0.914 42 H 0.101 0.899 43 H 0.092 0.908 44 H 0.081 0.919 45 H 0.110 0.890 46 H 0.109 0.891 47 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 1.731 1.775 -1.588 2.944 hybrid contribution -0.369 -0.321 1.134 1.235 sum 1.362 1.454 -0.454 2.043 Atomic orbital electron populations 1.20631 0.88863 1.03539 1.02983 1.18689 0.98225 0.90669 1.03014 1.24383 0.98360 1.00829 1.11024 1.24592 1.05696 0.89885 0.95236 1.86679 1.29393 1.79676 1.37072 0.94700 0.81034 0.81759 0.85382 1.82933 1.03561 0.98921 1.69204 1.24455 0.98028 0.96497 1.18958 1.16951 0.81601 0.87435 0.75824 1.90862 1.81548 1.18074 1.49479 1.45808 1.05236 1.09969 1.75752 1.22501 0.85803 0.93114 0.96413 0.85447 1.23380 0.92784 1.02036 0.98231 1.22321 0.90257 1.01991 0.98445 0.85120 1.23255 0.83255 0.84284 0.77245 1.90586 1.67008 1.21400 1.59874 1.86568 1.41167 1.50131 1.48624 1.22243 0.83624 0.92006 0.94111 1.22496 1.02784 0.96414 1.02356 1.21870 1.00702 1.00504 0.96853 1.22494 0.99075 1.03077 0.99413 1.23452 0.92159 1.04136 0.97530 1.20728 0.90838 1.00142 0.95867 0.90361 0.90883 0.90920 0.85141 0.77815 1.16407 1.16712 0.76514 0.89135 0.87865 0.91956 0.90839 0.89902 0.91335 0.90160 0.91372 0.89852 0.90845 0.91886 0.89042 0.89066 0.82471 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.18 9.48 36.01 0.34 0.52 16 2 C -0.09 0.00 5.78 -106.45 -0.62 -0.61 16 3 C -0.23 0.08 4.82 -35.86 -0.17 -0.09 16 4 C -0.04 0.04 2.77 36.01 0.10 0.14 16 5 O -0.52 -0.29 12.88 -35.23 -0.45 -0.74 16 6 Si 0.67 -1.10 32.14 -169.99 -5.46 -6.56 16 7 S 0.18 -0.14 20.84 -107.50 -2.24 -2.38 16 8 C -0.26 -0.31 6.45 -36.79 -0.24 -0.55 16 9 C 0.60 1.38 7.78 -12.90 -0.10 1.28 16 10 O -0.52 -2.92 16.44 5.19 0.09 -2.83 16 11 N -0.72 0.19 5.35 -54.35 -0.29 -0.10 16 12 C 0.13 -0.13 4.24 -67.11 -0.28 -0.41 16 13 H 0.13 -0.04 7.46 -51.93 -0.39 -0.43 16 14 C -0.13 0.22 7.16 -25.92 -0.19 0.04 16 15 C -0.11 0.14 4.26 -90.96 -0.39 -0.24 16 16 H 0.13 -0.37 8.14 -51.93 -0.42 -0.80 16 17 C 0.48 0.62 6.80 36.01 0.24 0.86 16 18 O -0.50 -1.56 11.40 -18.75 -0.21 -1.77 16 19 O -0.35 -0.59 9.89 -39.26 -0.39 -0.98 16 20 C 0.12 0.09 1.13 -90.62 -0.10 -0.01 16 21 C -0.18 -0.12 8.37 37.16 0.31 0.19 16 22 C -0.14 0.12 8.85 37.16 0.33 0.45 16 23 C -0.18 -0.13 8.37 37.16 0.31 0.18 16 24 C -0.13 0.17 7.43 -25.92 -0.19 -0.02 16 25 C -0.04 -0.04 9.78 -40.43 -0.40 -0.44 16 26 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 27 H 0.07 -0.15 8.10 -51.93 -0.42 -0.57 16 28 H 0.07 -0.13 6.99 -51.93 -0.36 -0.49 16 29 H 0.13 -0.25 6.25 -51.93 -0.32 -0.58 16 30 H 0.37 -0.80 8.70 45.56 0.40 -0.41 16 31 H -0.24 -0.28 7.11 56.52 0.40 0.12 16 32 H -0.24 0.05 7.11 56.52 0.40 0.45 16 33 H 0.40 -0.76 7.84 -40.82 -0.32 -1.08 16 34 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 35 H 0.10 -0.12 7.41 -51.93 -0.38 -0.50 16 36 H 0.06 0.03 8.14 -51.93 -0.42 -0.40 16 37 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 38 H 0.08 0.18 5.89 -51.93 -0.31 -0.12 16 39 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 41 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 42 H 0.08 0.20 5.89 -51.93 -0.31 -0.11 16 43 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 44 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 45 H 0.09 -0.08 8.10 -51.93 -0.42 -0.50 16 46 H 0.09 -0.12 8.14 -51.93 -0.42 -0.55 16 47 H 0.16 0.11 8.06 -52.49 -0.42 -0.31 16 LS Contribution 396.88 15.07 5.98 5.98 Total: 0.00 -7.42 396.88 -11.13 -18.55 By element: Atomic # 1 Polarization: -3.35 SS G_CDS: -7.11 Total: -10.46 kcal Atomic # 6 Polarization: 2.33 SS G_CDS: -1.04 Total: 1.30 kcal Atomic # 7 Polarization: 0.19 SS G_CDS: -0.29 Total: -0.10 kcal Atomic # 8 Polarization: -5.35 SS G_CDS: -0.97 Total: -6.32 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: -5.46 Total: -6.56 kcal Atomic # 16 Polarization: -0.14 SS G_CDS: -2.24 Total: -2.38 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -7.42 -11.13 -18.55 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12626394_6739946.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.005 kcal (2) G-P(sol) polarization free energy of solvation -7.419 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.424 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.129 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.548 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.553 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds