Wall clock time and date at job start Sat Mar 6 2021 17:51:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86299 * 109.47218 * 2 1 4 4 C 1.50706 * 109.47139 * 239.99899 * 2 1 3 5 5 C 1.38234 * 120.00196 * 300.00342 * 4 2 1 6 6 C 1.38235 * 119.99814 * 179.97438 * 5 4 2 7 7 C 1.38230 * 120.00326 * 359.97438 * 6 5 4 8 8 C 1.50696 * 120.00346 * 180.02562 * 7 6 5 9 9 C 1.50703 * 109.47297 * 89.99469 * 8 7 6 10 10 O 1.21279 * 119.99681 * 0.02562 * 9 8 7 11 11 N 1.34775 * 119.99940 * 180.02562 * 9 8 7 12 12 C 1.46506 * 119.99436 * 180.02562 * 11 9 8 13 13 H 1.08992 * 112.85243 * 336.19232 * 12 11 9 14 14 C 1.53779 * 113.61512 * 107.50511 * 12 11 9 15 15 C 1.53778 * 87.08269 * 89.11045 * 14 12 11 16 16 H 1.09001 * 113.61699 * 270.87935 * 15 14 12 17 17 C 1.50705 * 113.69237 * 139.99508 * 15 14 12 18 18 O 1.20825 * 119.99680 * 262.46703 * 17 15 14 19 19 O 1.34220 * 120.00142 * 82.45827 * 17 15 14 20 20 C 1.45208 * 116.99904 * 180.02562 * 19 17 15 21 21 C 1.50706 * 109.46821 * 180.02562 * 20 19 17 22 22 C 1.38235 * 119.99699 * 269.72476 * 21 20 19 23 23 C 1.38235 * 119.99192 * 179.74848 * 22 21 20 24 24 C 1.38233 * 120.00466 * 0.55228 * 23 22 21 25 25 C 1.38238 * 119.99992 * 359.70032 * 24 23 22 26 26 C 1.38232 * 119.99908 * 90.00535 * 21 20 19 27 27 C 1.53782 * 87.08391 * 25.43179 * 15 14 12 28 28 C 1.38243 * 120.00076 * 0.02562 * 7 6 5 29 29 C 1.38235 * 119.99598 * 359.97438 * 28 7 6 30 30 H 0.96702 * 114.00323 * 60.00087 * 1 2 3 31 31 H 1.08995 * 109.47526 * 120.00362 * 2 1 3 32 32 H 1.48503 * 110.00016 * 60.00076 * 3 2 1 33 33 H 1.48505 * 109.99993 * 181.32000 * 3 2 1 34 34 H 1.08000 * 119.99516 * 0.24808 * 5 4 2 35 35 H 1.08000 * 119.99318 * 179.97438 * 6 5 4 36 36 H 1.08999 * 109.47144 * 209.99851 * 8 7 6 37 37 H 1.09000 * 109.47061 * 329.99795 * 8 7 6 38 38 H 0.96994 * 120.00335 * 0.02562 * 11 9 8 39 39 H 1.08996 * 113.61420 * 203.66103 * 14 12 11 40 40 H 1.09006 * 113.61212 * 334.56091 * 14 12 11 41 41 H 1.08999 * 109.47168 * 300.00186 * 20 19 17 42 42 H 1.08998 * 109.47071 * 60.00306 * 20 19 17 43 43 H 1.07994 * 120.00489 * 0.02562 * 22 21 20 44 44 H 1.08002 * 119.99504 * 180.27862 * 23 22 21 45 45 H 1.08005 * 120.00300 * 179.73002 * 24 23 22 46 46 H 1.08001 * 119.99893 * 179.97438 * 25 24 23 47 47 H 1.08002 * 120.00186 * 359.97438 * 26 21 20 48 48 H 1.09002 * 113.61449 * 220.01743 * 27 15 14 49 49 H 1.09003 * 113.68483 * 89.12534 * 27 15 14 50 50 H 1.07999 * 120.00221 * 179.97438 * 28 7 6 51 51 H 1.08005 * 119.99808 * 179.97438 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 1.5973 -2.0339 -1.4493 6 6 2.0577 -2.6853 -2.5783 7 6 2.8516 -2.0132 -3.4887 8 6 3.3530 -2.7232 -4.7197 9 6 2.3594 -2.5498 -5.8394 10 8 1.3443 -1.9121 -5.6559 11 7 2.5989 -3.1035 -7.0446 12 6 1.6331 -2.9344 -8.1333 13 1 0.6247 -2.7262 -7.7759 14 6 2.1090 -1.9731 -9.2351 15 6 2.7451 -3.1955 -9.9177 16 1 3.7676 -3.3926 -9.5957 17 6 2.5929 -3.1993 -11.4170 18 8 1.7053 -3.8366 -11.9325 19 8 3.4433 -2.4945 -12.1797 20 6 3.2365 -2.5439 -13.6161 21 6 4.2788 -1.6995 -14.3030 22 6 4.0310 -0.3624 -14.5516 23 6 4.9892 0.4132 -15.1770 24 6 6.1905 -0.1507 -15.5640 25 6 6.4361 -1.4891 -15.3200 26 6 5.4802 -2.2634 -14.6895 27 6 1.6943 -4.0503 -9.1897 28 6 3.1856 -0.6897 -3.2699 29 6 2.7252 -0.0383 -2.1409 30 1 -0.3934 0.4417 -0.7650 31 1 1.7923 -0.5139 0.8899 32 1 1.5614 2.4679 1.2085 33 1 3.5346 1.7702 -0.0321 34 1 0.9730 -2.5575 -0.7404 35 1 1.7970 -3.7194 -2.7489 36 1 4.3129 -2.3010 -5.0170 37 1 3.4745 -3.7845 -4.5029 38 1 3.4105 -3.6139 -7.1913 39 1 1.2953 -1.5277 -9.8074 40 1 2.8363 -1.2384 -8.8894 41 1 3.3202 -3.5748 -13.9600 42 1 2.2439 -2.1611 -13.8537 43 1 3.0908 0.0771 -14.2533 44 1 4.7975 1.4589 -15.3672 45 1 6.9374 0.4543 -16.0565 46 1 7.3745 -1.9298 -15.6227 47 1 5.6721 -3.3090 -14.4990 48 1 2.0867 -4.9926 -8.8073 49 1 0.7666 -4.1737 -9.7486 50 1 3.8062 -0.1648 -3.9810 51 1 2.9865 0.9956 -1.9698 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12636046_12335836.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:51:17 Heat of formation + Delta-G solvation = -71.576109 kcal Electronic energy + Delta-G solvation = -32714.457350 eV Core-core repulsion = 28125.128441 eV Total energy + Delta-G solvation = -4589.328909 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.166 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -42.08021 -41.19235 -40.48156 -40.06056 -39.05922 -37.57542 -37.33807 -34.46654 -33.89934 -33.20344 -31.93195 -31.91268 -29.95044 -28.49575 -26.98254 -26.87229 -25.64987 -23.78695 -23.62284 -22.98511 -22.40585 -22.13972 -21.43271 -20.46226 -19.02888 -18.40159 -18.31188 -17.98108 -17.54562 -17.37701 -17.22894 -16.93983 -16.54442 -16.30920 -16.14285 -16.02840 -15.93747 -15.57090 -15.43169 -14.86377 -14.67846 -14.65515 -14.50233 -14.44041 -14.16593 -13.96784 -13.92425 -13.82002 -13.51805 -13.44621 -13.27282 -13.10458 -12.94192 -12.76458 -12.20935 -12.19218 -12.14895 -11.94626 -11.90890 -11.83971 -11.67123 -11.64893 -11.35556 -10.95818 -10.39103 -10.19570 -9.94053 -9.89445 -9.83548 -9.58386 -4.99158 0.13225 0.26388 0.38500 0.49664 1.13347 1.33756 1.57379 1.65489 1.70546 1.97905 2.00170 2.79288 2.81144 3.12622 3.21754 3.48485 3.51486 3.54561 3.57797 3.71869 3.73617 3.77223 3.83969 3.89743 3.91893 4.02038 4.04268 4.12122 4.14848 4.23041 4.31255 4.35499 4.39592 4.47789 4.48419 4.52653 4.55158 4.60196 4.61858 4.69743 4.71110 4.74695 4.88804 4.91259 5.00446 5.01460 5.09825 5.34901 5.39653 5.42424 5.44720 5.49653 5.50646 5.57698 5.60311 5.94171 6.02620 6.36173 6.62487 6.71377 7.15705 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.068 4.068 3 Si 0.688 3.312 4 C -0.118 4.118 5 C -0.091 4.091 6 C -0.103 4.103 7 C -0.065 4.065 8 C -0.103 4.103 9 C 0.518 3.482 10 O -0.522 6.522 11 N -0.718 5.718 12 C 0.123 3.877 13 H 0.114 0.886 14 C -0.131 4.131 15 C -0.112 4.112 16 H 0.125 0.875 17 C 0.471 3.529 18 O -0.504 6.504 19 O -0.349 6.349 20 C 0.108 3.892 21 C -0.101 4.101 22 C -0.095 4.095 23 C -0.122 4.122 24 C -0.108 4.108 25 C -0.123 4.123 26 C -0.095 4.095 27 C -0.125 4.125 28 C -0.099 4.099 29 C -0.116 4.116 30 H 0.380 0.620 31 H 0.113 0.887 32 H -0.255 1.255 33 H -0.258 1.258 34 H 0.126 0.874 35 H 0.122 0.878 36 H 0.106 0.894 37 H 0.106 0.894 38 H 0.402 0.598 39 H 0.098 0.902 40 H 0.087 0.913 41 H 0.080 0.920 42 H 0.081 0.919 43 H 0.125 0.875 44 H 0.127 0.873 45 H 0.126 0.874 46 H 0.126 0.874 47 H 0.124 0.876 48 H 0.085 0.915 49 H 0.112 0.888 50 H 0.124 0.876 51 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.740 0.007 -3.097 5.662 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.179 4.179 3 Si 0.590 3.410 4 C -0.119 4.119 5 C -0.109 4.109 6 C -0.121 4.121 7 C -0.065 4.065 8 C -0.143 4.143 9 C 0.304 3.696 10 O -0.396 6.396 11 N -0.370 5.370 12 C 0.017 3.983 13 H 0.132 0.868 14 C -0.170 4.170 15 C -0.131 4.131 16 H 0.142 0.858 17 C 0.313 3.687 18 O -0.391 6.391 19 O -0.266 6.266 20 C 0.035 3.965 21 C -0.101 4.101 22 C -0.113 4.113 23 C -0.140 4.140 24 C -0.126 4.126 25 C -0.141 4.141 26 C -0.113 4.113 27 C -0.163 4.163 28 C -0.117 4.117 29 C -0.133 4.133 30 H 0.227 0.773 31 H 0.130 0.870 32 H -0.180 1.180 33 H -0.183 1.183 34 H 0.144 0.856 35 H 0.140 0.860 36 H 0.124 0.876 37 H 0.124 0.876 38 H 0.237 0.763 39 H 0.116 0.884 40 H 0.105 0.895 41 H 0.099 0.901 42 H 0.099 0.901 43 H 0.143 0.857 44 H 0.145 0.855 45 H 0.144 0.856 46 H 0.144 0.856 47 H 0.142 0.858 48 H 0.104 0.896 49 H 0.131 0.869 50 H 0.142 0.858 51 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 4.297 0.581 -2.161 4.845 hybrid contribution 0.608 -0.990 -0.314 1.204 sum 4.905 -0.410 -2.475 5.510 Atomic orbital electron populations 1.86488 1.17077 1.81750 1.49303 1.25047 0.85297 1.10065 0.97517 0.94619 0.80887 0.78355 0.87103 1.20336 0.99189 0.95309 0.97040 1.20956 0.98715 0.93849 0.97377 1.21016 0.96984 1.00017 0.94100 1.19254 0.98300 0.94260 0.94717 1.20693 0.98837 1.03065 0.91718 1.20599 0.87404 0.78639 0.82917 1.90767 1.27592 1.39162 1.82094 1.45717 1.24430 1.55912 1.10970 1.21776 0.94695 0.95816 0.86030 0.86824 1.23391 1.01278 0.95820 0.96527 1.22661 1.02610 1.01074 0.86736 0.85756 1.23557 0.78937 0.75637 0.90522 1.90693 1.32910 1.40559 1.74952 1.86592 1.54326 1.65699 1.20001 1.21849 0.97961 1.00232 0.76432 1.19477 0.95507 0.94489 1.00616 1.21107 0.99583 0.92890 0.97711 1.21212 0.93842 1.00167 0.98805 1.21308 0.97190 0.95308 0.98783 1.21208 0.99427 0.94250 0.99173 1.21099 0.92658 1.00158 0.97435 1.23370 0.99883 0.97574 0.95440 1.20906 0.99908 0.93800 0.97103 1.20944 0.98481 0.99236 0.94664 0.77266 0.86990 1.18013 1.18331 0.85613 0.85987 0.87583 0.87617 0.76315 0.88351 0.89466 0.90125 0.90108 0.85748 0.85535 0.85638 0.85553 0.85780 0.89589 0.86946 0.85784 0.85659 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.74 12.77 -35.23 -0.45 -1.19 16 2 C -0.07 -0.05 2.82 36.01 0.10 0.05 16 3 Si 0.69 -0.18 29.79 -169.99 -5.06 -5.25 16 4 C -0.12 -0.14 5.39 -104.62 -0.56 -0.71 16 5 C -0.09 -0.14 9.61 -39.58 -0.38 -0.52 16 6 C -0.10 -0.10 9.70 -39.59 -0.38 -0.48 16 7 C -0.06 -0.02 4.37 -104.62 -0.46 -0.48 16 8 C -0.10 0.26 5.83 -29.04 -0.17 0.09 16 9 C 0.52 -0.13 7.82 -10.98 -0.09 -0.21 16 10 O -0.52 -2.24 15.63 5.56 0.09 -2.16 16 11 N -0.72 2.00 5.26 -53.01 -0.28 1.72 16 12 C 0.12 -0.22 4.32 -67.11 -0.29 -0.51 16 13 H 0.11 0.01 7.46 -51.93 -0.39 -0.38 16 14 C -0.13 0.25 7.43 -25.92 -0.19 0.06 16 15 C -0.11 0.23 4.13 -90.96 -0.38 -0.15 16 16 H 0.12 -0.50 8.14 -51.93 -0.42 -0.93 16 17 C 0.47 0.52 7.49 36.01 0.27 0.79 16 18 O -0.50 -1.95 15.65 -18.75 -0.29 -2.24 16 19 O -0.35 -0.47 10.20 -39.23 -0.40 -0.87 16 20 C 0.11 0.08 5.59 36.01 0.20 0.28 16 21 C -0.10 -0.08 5.52 -104.62 -0.58 -0.66 16 22 C -0.09 -0.04 9.70 -39.58 -0.38 -0.42 16 23 C -0.12 0.01 10.05 -39.58 -0.40 -0.39 16 24 C -0.11 0.03 10.05 -39.58 -0.40 -0.37 16 25 C -0.12 0.02 10.05 -39.58 -0.40 -0.38 16 26 C -0.10 -0.03 9.70 -39.59 -0.38 -0.41 16 27 C -0.12 0.28 7.15 -25.91 -0.19 0.10 16 28 C -0.10 -0.04 9.70 -39.58 -0.38 -0.43 16 29 C -0.12 -0.07 8.67 -39.58 -0.34 -0.41 16 30 H 0.38 -0.81 8.70 45.56 0.40 -0.41 16 31 H 0.11 0.10 7.96 -51.93 -0.41 -0.31 16 32 H -0.26 -0.73 7.11 56.52 0.40 -0.33 16 33 H -0.26 -0.46 7.11 56.52 0.40 -0.06 16 34 H 0.13 0.14 8.06 -52.49 -0.42 -0.28 16 35 H 0.12 -0.06 8.06 -52.49 -0.42 -0.49 16 36 H 0.11 -0.49 8.09 -51.93 -0.42 -0.91 16 37 H 0.11 -0.47 8.09 -51.93 -0.42 -0.89 16 38 H 0.40 -2.27 8.70 -40.82 -0.36 -2.62 16 39 H 0.10 -0.15 8.10 -51.93 -0.42 -0.57 16 40 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 41 H 0.08 0.03 8.08 -51.93 -0.42 -0.39 16 42 H 0.08 0.03 8.08 -51.93 -0.42 -0.39 16 43 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 44 H 0.13 -0.23 8.06 -52.49 -0.42 -0.66 16 45 H 0.13 -0.26 8.06 -52.48 -0.42 -0.68 16 46 H 0.13 -0.25 8.06 -52.49 -0.42 -0.67 16 47 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 48 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 49 H 0.11 -0.10 7.44 -51.93 -0.39 -0.49 16 50 H 0.12 -0.17 8.06 -52.49 -0.42 -0.60 16 51 H 0.13 -0.15 4.88 -52.48 -0.26 -0.40 16 LS Contribution 433.08 15.07 6.53 6.53 Total: 0.00 -10.48 433.08 -13.00 -23.48 By element: Atomic # 1 Polarization: -7.51 SS G_CDS: -7.35 Total: -14.87 kcal Atomic # 6 Polarization: 0.63 SS G_CDS: -5.78 Total: -5.15 kcal Atomic # 7 Polarization: 2.00 SS G_CDS: -0.28 Total: 1.72 kcal Atomic # 8 Polarization: -5.40 SS G_CDS: -1.06 Total: -6.46 kcal Atomic # 14 Polarization: -0.18 SS G_CDS: -5.06 Total: -5.25 kcal Total LS contribution 6.53 Total: 6.53 kcal Total: -10.48 -13.00 -23.48 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12636046_12335836.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.097 kcal (2) G-P(sol) polarization free energy of solvation -10.477 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.574 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.002 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.479 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.576 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds