Wall clock time and date at job start Sat Mar 6 2021 17:54:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86298 * 109.47264 * 2 1 4 4 C 1.50696 * 109.46923 * 240.00065 * 2 1 3 5 5 C 1.34854 * 125.89121 * 120.32651 * 4 2 1 6 6 C 1.40890 * 107.41722 * 180.15763 * 5 4 2 7 7 C 1.34856 * 107.41764 * 359.55980 * 6 5 4 8 8 C 1.50694 * 125.88896 * 180.23979 * 7 6 5 9 9 C 1.50704 * 109.46972 * 85.03378 * 8 7 6 10 10 O 1.21285 * 119.99804 * 359.97438 * 9 8 7 11 11 N 1.34777 * 120.00261 * 179.97438 * 9 8 7 12 12 C 1.46501 * 119.99931 * 179.97438 * 11 9 8 13 13 H 1.08990 * 112.85086 * 23.80520 * 12 11 9 14 14 C 1.53784 * 113.61338 * 155.00352 * 12 11 9 15 15 C 1.53774 * 87.08078 * 89.11394 * 14 12 11 16 16 H 1.09004 * 113.61474 * 270.88186 * 15 14 12 17 17 C 1.50704 * 113.61389 * 140.06848 * 15 14 12 18 18 O 1.20828 * 119.99738 * 359.97438 * 17 15 14 19 19 O 1.34225 * 120.00085 * 180.02562 * 17 15 14 20 20 C 1.45205 * 116.99936 * 179.97438 * 19 17 15 21 21 C 1.50697 * 109.47113 * 179.97438 * 20 19 17 22 22 C 1.38243 * 120.00049 * 269.72756 * 21 20 19 23 23 C 1.38236 * 119.99736 * 179.74761 * 22 21 20 24 24 C 1.38234 * 120.00008 * 0.54016 * 23 22 21 25 25 C 1.38230 * 120.00141 * 359.71309 * 24 23 22 26 26 C 1.38236 * 120.00287 * 0.02562 * 25 24 23 27 27 C 1.53779 * 87.08366 * 25.43170 * 15 14 12 28 28 N 1.36337 * 108.21648 * 0.27154 * 7 6 5 29 29 H 0.96697 * 114.00097 * 59.99777 * 1 2 3 30 30 H 1.08996 * 109.46968 * 120.00121 * 2 1 3 31 31 H 1.48504 * 109.99697 * 59.99939 * 3 2 1 32 32 H 1.48491 * 109.99961 * 181.32095 * 3 2 1 33 33 H 1.07999 * 126.28920 * 0.02562 * 5 4 2 34 34 H 1.08002 * 126.29400 * 179.83402 * 6 5 4 35 35 H 1.09001 * 109.46944 * 205.02501 * 8 7 6 36 36 H 1.08993 * 109.48079 * 325.03338 * 8 7 6 37 37 H 0.96996 * 119.99936 * 0.02562 * 11 9 8 38 38 H 1.08993 * 113.61144 * 203.66831 * 14 12 11 39 39 H 1.09004 * 113.61309 * 334.48247 * 14 12 11 40 40 H 1.08994 * 109.46940 * 299.99434 * 20 19 17 41 41 H 1.09001 * 109.46925 * 59.99805 * 20 19 17 42 42 H 1.07992 * 119.99732 * 0.02562 * 22 21 20 43 43 H 1.07999 * 119.99678 * 180.27223 * 23 22 21 44 44 H 1.07997 * 119.99931 * 179.72614 * 24 23 22 45 45 H 1.08001 * 120.00081 * 179.97438 * 25 24 23 46 46 H 1.07993 * 120.00334 * 179.97438 * 26 25 24 47 47 H 1.08996 * 113.61394 * 220.01941 * 27 15 14 48 48 H 1.09000 * 113.61106 * 89.11427 * 27 15 14 49 49 H 0.97000 * 125.63784 * 180.02562 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7149 -0.1745 -2.1882 6 6 2.9447 -1.1746 -3.1536 7 6 2.3009 -2.2865 -2.7440 8 6 2.2749 -3.6089 -3.4662 9 6 3.4933 -4.4115 -3.0886 10 8 4.3031 -3.9544 -2.3100 11 7 3.6829 -5.6372 -3.6160 12 6 4.8676 -6.4171 -3.2492 13 1 5.2855 -6.1246 -2.2861 14 6 4.6773 -7.9354 -3.4025 15 6 5.1679 -7.7714 -4.8507 16 1 4.3685 -7.5613 -5.5614 17 6 6.0810 -8.8797 -5.3079 18 8 6.3603 -9.7819 -4.5543 19 8 6.5849 -8.8639 -6.5519 20 6 7.4577 -9.9633 -6.9235 21 6 7.9226 -9.7771 -8.3449 22 6 7.1919 -10.3161 -9.3873 23 6 7.6157 -10.1408 -10.6914 24 6 8.7760 -9.4362 -10.9524 25 6 9.5094 -8.9017 -9.9097 26 6 9.0828 -9.0723 -8.6059 27 6 5.9132 -6.5141 -4.3726 28 7 1.6770 -2.0077 -1.5643 29 1 -0.3933 0.4417 -0.7650 30 1 1.7923 -0.5138 0.8899 31 1 1.5615 2.4678 1.2085 32 1 3.5346 1.7702 -0.0322 33 1 3.0945 0.8363 -2.2121 34 1 3.5325 -1.0713 -4.0537 35 1 1.3765 -4.1586 -3.1855 36 1 2.2734 -3.4354 -4.5423 37 1 3.0354 -6.0026 -4.2389 38 1 5.3486 -8.5248 -2.7781 39 1 3.6380 -8.2551 -3.3258 40 1 8.3208 -9.9829 -6.2582 41 1 6.9130 -10.9037 -6.8400 42 1 6.2878 -10.8702 -9.1832 43 1 7.0425 -10.5581 -11.5061 44 1 9.1094 -9.3031 -11.9709 45 1 10.4161 -8.3516 -10.1135 46 1 9.6560 -8.6551 -7.7912 47 1 5.8717 -5.6863 -5.0805 48 1 6.9226 -6.7151 -4.0135 49 1 1.1412 -2.6295 -1.0475 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12636046_14644196.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:54:24 Heat of formation + Delta-G solvation = -51.340572 kcal Electronic energy + Delta-G solvation = -31476.739897 eV Core-core repulsion = 26951.088696 eV Total energy + Delta-G solvation = -4525.651201 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.161 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -42.33331 -42.01238 -40.87038 -40.13319 -39.07634 -37.67424 -37.35679 -34.45491 -33.24272 -32.96829 -31.92883 -31.85494 -29.58760 -28.46508 -26.98479 -26.82602 -25.16045 -23.62008 -22.94525 -22.30792 -22.08976 -21.29043 -21.00239 -20.47154 -19.07511 -18.85909 -18.32701 -18.01756 -17.54824 -17.36119 -17.21001 -16.71868 -16.39013 -16.24984 -16.08210 -16.05496 -15.50038 -15.24371 -14.91994 -14.74465 -14.51389 -14.45529 -14.23091 -14.21945 -14.02214 -13.92676 -13.84293 -13.76372 -13.61334 -13.48429 -13.28481 -12.96845 -12.77992 -12.20136 -12.14674 -12.00371 -11.95078 -11.88030 -11.84919 -11.67218 -11.36210 -10.96224 -10.61146 -10.21121 -9.93733 -9.89177 -9.71386 -8.89881 -4.95527 0.13434 0.38812 1.12721 1.14936 1.28520 1.55010 1.70244 1.73421 1.87328 2.00798 2.21824 2.50462 2.81192 3.11632 3.20930 3.45981 3.51230 3.53248 3.60734 3.71533 3.73627 3.83602 3.87792 3.91022 3.99059 4.02163 4.12464 4.15000 4.30794 4.32591 4.38627 4.45675 4.48085 4.51995 4.59076 4.60121 4.61255 4.68624 4.74676 4.82189 4.88093 4.91535 5.00757 5.32064 5.34759 5.35559 5.40148 5.44841 5.49914 5.50958 5.94477 6.05299 6.19818 6.33431 6.53216 6.66210 6.70967 7.14226 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.050 4.050 3 Si 0.720 3.280 4 C -0.010 4.010 5 C -0.188 4.188 6 C -0.172 4.172 7 C 0.034 3.966 8 C -0.071 4.071 9 C 0.514 3.486 10 O -0.519 6.519 11 N -0.717 5.717 12 C 0.122 3.878 13 H 0.113 0.887 14 C -0.125 4.125 15 C -0.111 4.111 16 H 0.125 0.875 17 C 0.471 3.529 18 O -0.504 6.504 19 O -0.349 6.349 20 C 0.108 3.892 21 C -0.101 4.101 22 C -0.095 4.095 23 C -0.123 4.123 24 C -0.108 4.108 25 C -0.122 4.122 26 C -0.095 4.095 27 C -0.131 4.131 28 N -0.535 5.535 29 H 0.381 0.619 30 H 0.110 0.890 31 H -0.256 1.256 32 H -0.255 1.255 33 H 0.141 0.859 34 H 0.137 0.863 35 H 0.101 0.899 36 H 0.119 0.881 37 H 0.402 0.598 38 H 0.112 0.888 39 H 0.085 0.915 40 H 0.080 0.920 41 H 0.080 0.920 42 H 0.124 0.876 43 H 0.127 0.873 44 H 0.126 0.874 45 H 0.127 0.873 46 H 0.124 0.876 47 H 0.088 0.912 48 H 0.098 0.902 49 H 0.413 0.587 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.216 0.005 -6.084 6.881 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.160 4.160 3 Si 0.620 3.380 4 C -0.123 4.123 5 C -0.213 4.213 6 C -0.196 4.196 7 C -0.080 4.080 8 C -0.112 4.112 9 C 0.300 3.700 10 O -0.393 6.393 11 N -0.370 5.370 12 C 0.017 3.983 13 H 0.131 0.869 14 C -0.163 4.163 15 C -0.130 4.130 16 H 0.143 0.857 17 C 0.314 3.686 18 O -0.391 6.391 19 O -0.266 6.266 20 C 0.035 3.965 21 C -0.101 4.101 22 C -0.114 4.114 23 C -0.140 4.140 24 C -0.126 4.126 25 C -0.140 4.140 26 C -0.113 4.113 27 C -0.170 4.170 28 N -0.130 5.130 29 H 0.229 0.771 30 H 0.127 0.873 31 H -0.181 1.181 32 H -0.179 1.179 33 H 0.159 0.841 34 H 0.154 0.846 35 H 0.119 0.881 36 H 0.137 0.863 37 H 0.237 0.763 38 H 0.130 0.870 39 H 0.104 0.896 40 H 0.099 0.901 41 H 0.099 0.901 42 H 0.142 0.858 43 H 0.145 0.855 44 H 0.144 0.856 45 H 0.145 0.855 46 H 0.142 0.858 47 H 0.106 0.894 48 H 0.116 0.884 49 H 0.249 0.751 Dipole moment (debyes) X Y Z Total from point charges -2.030 0.242 -4.219 4.688 hybrid contribution -0.315 -1.534 -0.137 1.572 sum -2.345 -1.292 -4.356 5.113 Atomic orbital electron populations 1.86478 1.17448 1.81778 1.49524 1.24844 0.84826 1.10731 0.95606 0.94144 0.81035 0.76324 0.86484 1.20830 1.05978 0.85566 0.99960 1.20657 1.04373 1.00154 0.96068 1.20591 1.04685 0.92627 1.01737 1.19456 1.03054 0.95733 0.89727 1.20123 0.97091 0.91774 1.02191 1.20660 0.87625 0.81136 0.80563 1.90784 1.45434 1.69227 1.33816 1.45696 1.25184 1.17520 1.48606 1.21771 0.86244 0.90870 0.99443 0.86930 1.23366 1.03499 0.95712 0.93688 1.22656 0.98190 0.93605 0.98595 0.85710 1.23554 0.79126 0.86368 0.79594 1.90693 1.57588 1.36229 1.54636 1.86593 1.59344 1.48450 1.32202 1.21847 0.93411 0.88432 0.92783 1.19476 0.96322 1.00898 0.93401 1.21101 0.98976 0.98872 0.92404 1.21207 0.96959 0.99261 0.96622 1.21306 0.94913 0.96856 0.99498 1.21212 1.00221 1.00059 0.92531 1.21108 0.95860 0.97064 0.97261 1.23390 0.99254 0.95719 0.98649 1.41780 1.41263 1.10920 1.19000 0.77141 0.87251 1.18084 1.17921 0.84109 0.84562 0.88093 0.86313 0.76300 0.86972 0.89598 0.90121 0.90124 0.85779 0.85544 0.85629 0.85531 0.85760 0.89375 0.88366 0.75089 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.18 12.88 -35.23 -0.45 -0.63 16 2 C -0.05 -0.03 3.08 36.00 0.11 0.09 16 3 Si 0.72 -0.35 30.58 -169.99 -5.20 -5.55 16 4 C -0.01 -0.01 6.51 -81.79 -0.53 -0.55 16 5 C -0.19 -0.33 9.37 -39.78 -0.37 -0.71 16 6 C -0.17 -0.33 10.76 -39.78 -0.43 -0.76 16 7 C 0.03 0.03 5.66 -81.79 -0.46 -0.43 16 8 C -0.07 0.17 6.24 -29.04 -0.18 -0.01 16 9 C 0.51 0.05 7.82 -10.98 -0.09 -0.04 16 10 O -0.52 -2.65 15.63 5.55 0.09 -2.56 16 11 N -0.72 1.88 5.26 -53.02 -0.28 1.60 16 12 C 0.12 -0.18 4.32 -67.12 -0.29 -0.47 16 13 H 0.11 0.06 7.46 -51.93 -0.39 -0.32 16 14 C -0.12 0.26 7.15 -25.92 -0.19 0.07 16 15 C -0.11 0.21 4.13 -90.96 -0.38 -0.17 16 16 H 0.13 -0.49 8.14 -51.93 -0.42 -0.92 16 17 C 0.47 0.61 7.49 36.01 0.27 0.88 16 18 O -0.50 -2.04 15.65 -18.75 -0.29 -2.33 16 19 O -0.35 -0.53 10.20 -39.24 -0.40 -0.93 16 20 C 0.11 0.09 5.59 36.00 0.20 0.29 16 21 C -0.10 -0.09 5.52 -104.62 -0.58 -0.67 16 22 C -0.10 -0.04 9.70 -39.58 -0.38 -0.42 16 23 C -0.12 0.01 10.05 -39.58 -0.40 -0.39 16 24 C -0.11 0.01 10.05 -39.59 -0.40 -0.38 16 25 C -0.12 -0.01 10.05 -39.58 -0.40 -0.40 16 26 C -0.09 -0.05 9.70 -39.58 -0.38 -0.44 16 27 C -0.13 0.21 7.43 -25.92 -0.19 0.02 16 28 N -0.53 -0.51 6.07 -5.44 -0.03 -0.54 16 29 H 0.38 -1.30 8.70 45.56 0.40 -0.90 16 30 H 0.11 0.13 7.96 -51.93 -0.41 -0.28 16 31 H -0.26 -0.60 7.11 56.52 0.40 -0.20 16 32 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 33 H 0.14 0.01 6.22 -52.49 -0.33 -0.31 16 34 H 0.14 0.10 8.06 -52.49 -0.42 -0.32 16 35 H 0.10 -0.48 8.14 -51.93 -0.42 -0.90 16 36 H 0.12 -0.56 8.14 -51.93 -0.42 -0.98 16 37 H 0.40 -2.26 8.70 -40.82 -0.36 -2.62 16 38 H 0.11 -0.08 7.44 -51.93 -0.39 -0.46 16 39 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 40 H 0.08 0.05 8.08 -51.93 -0.42 -0.37 16 41 H 0.08 0.04 8.08 -51.93 -0.42 -0.38 16 42 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 43 H 0.13 -0.24 8.06 -52.49 -0.42 -0.66 16 44 H 0.13 -0.25 8.06 -52.49 -0.42 -0.67 16 45 H 0.13 -0.22 8.06 -52.49 -0.42 -0.64 16 46 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 47 H 0.09 -0.14 8.14 -51.93 -0.42 -0.57 16 48 H 0.10 -0.11 8.10 -51.93 -0.42 -0.53 16 49 H 0.41 -0.25 8.96 -40.82 -0.37 -0.62 16 LS Contribution 419.87 15.07 6.33 6.33 Total: 0.00 -11.49 419.87 -12.25 -23.74 By element: Atomic # 1 Polarization: -7.68 SS G_CDS: -6.95 Total: -14.62 kcal Atomic # 6 Polarization: 0.58 SS G_CDS: -5.06 Total: -4.49 kcal Atomic # 7 Polarization: 1.37 SS G_CDS: -0.31 Total: 1.06 kcal Atomic # 8 Polarization: -5.40 SS G_CDS: -1.06 Total: -6.46 kcal Atomic # 14 Polarization: -0.35 SS G_CDS: -5.20 Total: -5.55 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -11.49 -12.25 -23.74 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12636046_14644196.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.598 kcal (2) G-P(sol) polarization free energy of solvation -11.488 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.086 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.254 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.743 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.341 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds