Wall clock time and date at job start Sat Mar 6 2021 17:56:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.37634 * 125.67753 * 2 1 4 4 C 1.46676 * 126.22676 * 0.03463 * 3 2 1 5 5 O 1.21692 * 119.99672 * 355.25300 * 4 3 2 6 6 N 1.34777 * 119.99833 * 175.25558 * 4 3 2 7 7 C 1.46500 * 119.99644 * 185.09474 * 6 4 3 8 8 H 1.09008 * 112.85141 * 336.19624 * 7 6 4 9 9 C 1.53780 * 113.61346 * 107.50193 * 7 6 4 10 10 C 1.53784 * 87.07899 * 89.11983 * 9 7 6 11 11 H 1.09002 * 113.68545 * 270.87384 * 10 9 7 12 12 C 1.50697 * 113.61787 * 139.98109 * 10 9 7 13 13 O 1.20829 * 120.00354 * 262.50037 * 12 10 9 14 14 O 1.34233 * 119.99723 * 82.49849 * 12 10 9 15 15 C 1.45202 * 116.99890 * 180.02562 * 14 12 10 16 16 C 1.50695 * 109.47251 * 180.02562 * 15 14 12 17 17 C 1.38231 * 120.00057 * 269.72224 * 16 15 14 18 18 C 1.38234 * 120.00191 * 179.74058 * 17 16 15 19 19 C 1.38235 * 119.99788 * 0.55651 * 18 17 16 20 20 C 1.38236 * 120.00229 * 359.69936 * 19 18 17 21 21 C 1.38239 * 119.99957 * 89.99754 * 16 15 14 22 22 C 1.53778 * 87.08282 * 25.42972 * 10 9 7 23 23 C 1.37889 * 107.55139 * 180.22278 * 3 2 1 24 24 C 1.39880 * 107.08892 * 359.77889 * 23 3 2 25 25 Br 1.89102 * 126.07258 * 180.02562 * 24 23 3 26 26 C 1.35507 * 107.85507 * 359.97438 * 24 23 3 27 27 C 1.50696 * 125.57539 * 179.97438 * 26 24 23 28 28 O 1.42894 * 109.47614 * 150.02065 * 27 26 24 29 29 Si 1.86305 * 109.46960 * 30.02063 * 27 26 24 30 30 H 1.08998 * 109.47360 * 274.88855 * 1 2 3 31 31 H 1.09000 * 109.46939 * 34.88838 * 1 2 3 32 32 H 1.09001 * 109.46907 * 154.88469 * 1 2 3 33 33 H 0.96997 * 120.00271 * 5.10053 * 6 4 3 34 34 H 1.09004 * 113.61347 * 203.66327 * 9 7 6 35 35 H 1.08991 * 113.61688 * 334.56621 * 9 7 6 36 36 H 1.09001 * 109.46912 * 300.00080 * 15 14 12 37 37 H 1.08997 * 109.47068 * 59.99645 * 15 14 12 38 38 H 1.07998 * 119.99694 * 0.02562 * 17 16 15 39 39 H 1.07997 * 120.00445 * 180.27593 * 18 17 16 40 40 H 1.08003 * 120.00266 * 179.72181 * 19 18 17 41 41 H 1.08000 * 120.00234 * 180.02562 * 20 19 18 42 42 H 1.07991 * 120.00247 * 359.97438 * 21 16 15 43 43 H 1.08995 * 113.61771 * 220.02041 * 22 10 9 44 44 H 1.09004 * 113.61270 * 89.11849 * 22 10 9 45 45 H 1.08001 * 126.45497 * 179.81390 * 23 3 2 46 46 H 1.08995 * 109.46951 * 270.02622 * 27 26 24 47 47 H 0.96700 * 114.00265 * 299.99929 * 28 27 26 48 48 H 1.48504 * 109.99990 * 58.68696 * 29 27 26 49 49 H 1.48497 * 109.99876 * 180.02562 * 29 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1180 0.0000 4 6 1.8122 2.5122 0.0007 5 8 0.6248 2.7643 -0.0858 6 7 2.7086 3.5140 0.0972 7 6 2.2484 4.9003 0.2104 8 1 1.2478 5.0487 -0.1958 9 6 2.4413 5.5007 1.6129 10 6 3.8366 5.9462 1.1444 11 1 4.6142 5.2016 1.3151 12 6 4.2256 7.3198 1.6270 13 8 4.0819 8.2773 0.9042 14 8 4.7316 7.4795 2.8600 15 6 5.0836 8.8309 3.2581 16 6 5.6315 8.8144 4.6618 17 6 4.7791 8.9727 5.7384 18 6 5.2811 8.9523 7.0263 19 6 6.6370 8.7850 7.2370 20 6 7.4902 8.6320 6.1602 21 6 6.9874 8.6467 4.8725 22 6 3.2743 5.9324 -0.2868 23 6 3.5782 0.6890 -0.0051 24 6 3.5529 -0.7095 -0.0030 25 35 5.0610 -1.8505 -0.0073 26 6 2.2558 -1.1016 0.0037 27 6 1.7712 -2.5285 0.0075 28 8 0.5164 -2.6038 0.6869 29 14 3.0160 -3.6047 0.8812 30 1 -0.3634 0.0876 1.0239 31 1 -0.3633 0.8430 -0.5878 32 1 -0.3633 -0.9305 -0.4362 33 1 3.6584 3.3172 0.0916 34 1 1.7679 6.3302 1.8291 35 1 2.4648 4.7552 2.4076 36 1 5.8389 9.2248 2.5781 37 1 4.1965 9.4631 3.2213 38 1 3.7204 9.1078 5.5736 39 1 4.6145 9.0715 7.8676 40 1 7.0298 8.7735 8.2430 41 1 8.5495 8.5009 6.3249 42 1 7.6539 8.5271 4.0313 43 1 3.9703 5.5353 -1.0256 44 1 2.8287 6.8799 -0.5899 45 1 4.4583 1.3150 -0.0093 46 1 1.6498 -2.8736 -1.0192 47 1 0.5497 -2.3114 1.6081 48 1 3.2143 -3.1250 2.2726 49 1 2.5501 -5.0147 0.8912 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12636046_5000100.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:56:09 Heat of formation + Delta-G solvation = -41.732495 kcal Electronic energy + Delta-G solvation = -34502.496446 eV Core-core repulsion = 29637.443880 eV Total energy + Delta-G solvation = -4865.052566 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 449.072 amu Computer time = 1.71 seconds Orbital eigenvalues (eV) -42.92466 -42.04685 -40.81949 -40.09328 -39.03825 -37.97929 -37.47329 -34.98549 -34.30849 -33.20507 -32.30505 -31.88054 -31.16000 -28.74033 -27.44725 -27.31435 -26.84687 -26.34610 -23.61314 -23.57585 -22.73439 -22.20623 -21.70506 -20.78603 -20.30925 -19.18466 -18.84138 -18.36807 -18.14966 -17.59138 -17.42557 -17.21661 -17.03880 -16.48567 -16.19052 -16.08255 -15.99159 -15.70745 -15.50242 -15.32292 -14.97871 -14.69761 -14.55019 -14.54234 -14.38057 -14.14290 -14.10056 -13.92925 -13.75112 -13.67445 -13.45118 -13.35577 -13.16675 -12.94316 -12.79170 -12.51833 -12.16180 -12.11379 -12.10347 -11.85809 -11.77033 -11.71426 -11.62945 -11.40476 -11.24728 -10.87208 -10.28090 -9.90610 -9.87330 -9.87049 -9.34685 -4.68344 0.14395 0.15305 0.36281 0.41946 0.90233 1.06906 1.21309 1.43376 1.55826 1.71406 1.92855 2.11122 2.22077 2.83919 3.07497 3.21906 3.28919 3.31623 3.49906 3.55048 3.66920 3.75033 3.78573 3.78743 4.00976 4.09607 4.09769 4.17711 4.22431 4.24410 4.32735 4.36213 4.41302 4.48207 4.54813 4.62323 4.64444 4.65785 4.66208 4.70141 4.81045 4.89200 4.96424 4.99255 5.07127 5.23348 5.32415 5.43617 5.48037 5.52400 5.55123 5.58114 5.77311 6.00098 6.23783 6.36780 6.64483 7.02007 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.067 3.933 2 N -0.390 5.390 3 C -0.058 4.058 4 C 0.596 3.404 5 O -0.574 6.574 6 N -0.685 5.685 7 C 0.127 3.873 8 H 0.101 0.899 9 C -0.128 4.128 10 C -0.105 4.105 11 H 0.153 0.847 12 C 0.471 3.529 13 O -0.535 6.535 14 O -0.353 6.353 15 C 0.108 3.892 16 C -0.113 4.113 17 C -0.108 4.108 18 C -0.132 4.132 19 C -0.116 4.116 20 C -0.130 4.130 21 C -0.106 4.106 22 C -0.116 4.116 23 C -0.088 4.088 24 C -0.191 4.191 25 Br 0.090 6.910 26 C 0.058 3.942 27 C -0.041 4.041 28 O -0.542 6.542 29 Si 0.628 3.372 30 H 0.084 0.916 31 H 0.090 0.910 32 H 0.107 0.893 33 H 0.420 0.580 34 H 0.094 0.906 35 H 0.091 0.909 36 H 0.082 0.918 37 H 0.079 0.921 38 H 0.131 0.869 39 H 0.141 0.859 40 H 0.142 0.858 41 H 0.143 0.857 42 H 0.135 0.865 43 H 0.105 0.895 44 H 0.101 0.899 45 H 0.191 0.809 46 H 0.141 0.859 47 H 0.386 0.614 48 H -0.279 1.279 49 H -0.271 1.271 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.304 0.107 1.171 5.432 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 N -0.062 5.062 3 C -0.172 4.172 4 C 0.385 3.615 5 O -0.455 6.455 6 N -0.337 5.337 7 C 0.021 3.979 8 H 0.119 0.881 9 C -0.167 4.167 10 C -0.124 4.124 11 H 0.171 0.829 12 C 0.315 3.685 13 O -0.425 6.425 14 O -0.270 6.270 15 C 0.035 3.965 16 C -0.113 4.113 17 C -0.126 4.126 18 C -0.150 4.150 19 C -0.134 4.134 20 C -0.148 4.148 21 C -0.124 4.124 22 C -0.154 4.154 23 C -0.115 4.115 24 C -0.276 4.276 25 Br 0.173 6.827 26 C -0.065 4.065 27 C -0.151 4.151 28 O -0.349 6.349 29 Si 0.530 3.470 30 H 0.102 0.898 31 H 0.108 0.892 32 H 0.125 0.875 33 H 0.259 0.741 34 H 0.113 0.887 35 H 0.109 0.891 36 H 0.100 0.900 37 H 0.097 0.903 38 H 0.149 0.851 39 H 0.159 0.841 40 H 0.160 0.840 41 H 0.161 0.839 42 H 0.153 0.847 43 H 0.124 0.876 44 H 0.120 0.880 45 H 0.208 0.792 46 H 0.158 0.842 47 H 0.235 0.765 48 H -0.204 1.204 49 H -0.197 1.197 Dipole moment (debyes) X Y Z Total from point charges 4.525 -0.507 1.029 4.668 hybrid contribution -1.052 0.889 0.854 1.621 sum 3.473 0.382 1.883 3.969 Atomic orbital electron populations 1.22462 0.74320 1.05753 1.04787 1.43918 1.07710 1.03883 1.50683 1.20114 0.90382 0.87620 1.19056 1.16936 0.85367 0.83731 0.75510 1.90827 1.17720 1.85054 1.51851 1.45126 1.10250 1.04653 1.73639 1.21718 0.99768 0.79886 0.96524 0.88127 1.23375 0.93719 1.01387 0.98244 1.22826 1.00219 0.90926 0.98384 0.82900 1.24130 0.72620 0.92780 0.78943 1.90683 1.51684 1.43432 1.56661 1.86601 1.73590 1.33490 1.33326 1.21861 1.00739 0.80952 0.92944 1.19582 0.94422 1.03921 0.93397 1.21300 1.00100 0.98656 0.92560 1.21469 0.96281 0.99987 0.97229 1.21605 0.93710 0.97859 1.00242 1.21488 1.01190 0.99851 0.92293 1.21318 0.94587 0.98212 0.98275 1.23302 0.97855 0.99650 0.94573 1.21543 0.95619 0.92519 1.01793 1.20694 0.90563 0.95046 1.21331 1.96323 1.32686 1.56350 1.97317 1.21016 0.89700 0.90167 1.05582 1.24692 0.93427 0.92674 1.04306 1.86546 1.29796 1.88803 1.29751 0.92735 0.92299 0.77908 0.84085 0.89753 0.89152 0.87465 0.74119 0.88716 0.89070 0.89989 0.90302 0.85086 0.84120 0.83976 0.83894 0.84735 0.87609 0.88032 0.79227 0.84175 0.76467 1.20441 1.19695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.03 9.46 127.77 1.21 1.24 16 2 N -0.39 -0.57 3.16 -519.60 -1.64 -2.21 16 3 C -0.06 -0.02 6.89 40.35 0.28 0.26 16 4 C 0.60 0.89 7.77 86.45 0.67 1.56 16 5 O -0.57 -5.05 14.34 -4.32 -0.06 -5.11 16 6 N -0.68 3.70 5.25 -444.00 -2.33 1.37 16 7 C 0.13 -0.53 4.36 45.52 0.20 -0.33 16 8 H 0.10 0.00 7.42 -2.38 -0.02 -0.02 16 9 C -0.13 0.58 7.43 31.12 0.23 0.82 16 10 C -0.10 0.57 4.14 -11.01 -0.05 0.52 16 11 H 0.15 -1.65 8.14 -2.39 -0.02 -1.67 16 12 C 0.47 0.89 7.48 71.24 0.53 1.42 16 13 O -0.54 -4.26 15.65 21.96 0.34 -3.92 16 14 O -0.35 -0.94 10.20 -51.44 -0.52 -1.47 16 15 C 0.11 0.22 5.59 71.23 0.40 0.61 16 16 C -0.11 -0.23 5.52 -19.87 -0.11 -0.34 16 17 C -0.11 -0.14 9.70 22.27 0.22 0.08 16 18 C -0.13 0.02 10.05 22.27 0.22 0.24 16 19 C -0.12 0.09 10.05 22.27 0.22 0.32 16 20 C -0.13 0.08 10.05 22.27 0.22 0.31 16 21 C -0.11 -0.07 9.70 22.27 0.22 0.14 16 22 C -0.12 0.66 7.15 31.12 0.22 0.88 16 23 C -0.09 0.35 10.34 22.58 0.23 0.58 16 24 C -0.19 0.30 6.16 22.04 0.14 0.43 16 25 Br 0.09 -0.34 28.24 -20.37 -0.58 -0.91 16 26 C 0.06 0.02 6.14 41.34 0.25 0.27 16 27 C -0.04 0.01 2.87 71.23 0.20 0.21 16 28 O -0.54 -0.37 10.28 -148.98 -1.53 -1.90 16 29 Si 0.63 1.14 27.10 68.60 1.86 3.00 16 30 H 0.08 -0.07 8.14 -2.39 -0.02 -0.09 16 31 H 0.09 0.31 6.51 -2.39 -0.02 0.29 16 32 H 0.11 -0.08 6.49 -2.39 -0.02 -0.09 16 33 H 0.42 -4.92 7.60 -92.71 -0.70 -5.63 16 34 H 0.09 -0.30 8.09 -2.38 -0.02 -0.32 16 35 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 36 H 0.08 0.11 8.08 -2.39 -0.02 0.09 16 37 H 0.08 0.15 8.08 -2.39 -0.02 0.13 16 38 H 0.13 -0.16 8.06 -2.91 -0.02 -0.18 16 39 H 0.14 -0.55 8.06 -2.91 -0.02 -0.57 16 40 H 0.14 -0.69 8.06 -2.91 -0.02 -0.72 16 41 H 0.14 -0.67 8.06 -2.91 -0.02 -0.70 16 42 H 0.13 -0.32 8.06 -2.92 -0.02 -0.34 16 43 H 0.11 -0.95 8.14 -2.39 -0.02 -0.97 16 44 H 0.10 -0.23 7.44 -2.39 -0.02 -0.25 16 45 H 0.19 -2.17 7.45 -2.91 -0.02 -2.19 16 46 H 0.14 -0.34 7.96 -2.39 -0.02 -0.36 16 47 H 0.39 -1.35 8.70 -74.06 -0.64 -1.99 16 48 H -0.28 -1.90 7.11 99.48 0.71 -1.19 16 49 H -0.27 -2.23 7.11 99.48 0.71 -1.53 16 Total: 0.00 -21.41 425.93 0.76 -20.65 By element: Atomic # 1 Polarization: -18.44 SS G_CDS: -0.29 Total: -18.74 kcal Atomic # 6 Polarization: 3.72 SS G_CDS: 5.52 Total: 9.24 kcal Atomic # 7 Polarization: 3.13 SS G_CDS: -3.97 Total: -0.84 kcal Atomic # 8 Polarization: -10.62 SS G_CDS: -1.77 Total: -12.39 kcal Atomic # 14 Polarization: 1.14 SS G_CDS: 1.86 Total: 3.00 kcal Atomic # 35 Polarization: -0.34 SS G_CDS: -0.58 Total: -0.91 kcal Total: -21.41 0.76 -20.65 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12636046_5000100.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.085 kcal (2) G-P(sol) polarization free energy of solvation -21.406 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.490 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.758 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.648 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.732 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.71 seconds