Wall clock time and date at job start Sat Mar 6 2021 17:56:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.33818 * 122.44994 * 2 1 4 4 C 1.50706 * 124.52150 * 0.02562 * 3 2 1 5 5 O 1.42898 * 109.46628 * 246.54069 * 4 3 2 6 6 Si 1.86300 * 109.46993 * 126.53927 * 4 3 2 7 7 S 1.70620 * 110.95486 * 179.74762 * 3 2 1 8 8 C 1.75831 * 91.56076 * 0.35629 * 7 3 2 9 9 C 1.46585 * 125.45789 * 179.91758 * 8 7 3 10 10 O 1.21701 * 120.00298 * 179.69786 * 9 8 7 11 11 N 1.34775 * 119.99775 * 359.41239 * 9 8 7 12 12 C 1.46499 * 119.99949 * 180.27694 * 11 9 8 13 13 H 1.08995 * 112.85372 * 334.67532 * 12 11 9 14 14 C 1.53789 * 113.61117 * 105.86862 * 12 11 9 15 15 C 1.54056 * 86.98404 * 89.16239 * 14 12 11 16 16 H 1.09000 * 113.68956 * 270.86890 * 15 14 12 17 17 C 1.50705 * 113.61756 * 139.97824 * 15 14 12 18 18 O 1.20818 * 119.99793 * 262.50065 * 17 15 14 19 19 O 1.34229 * 119.99618 * 82.50103 * 17 15 14 20 20 C 1.45200 * 116.99793 * 180.02562 * 19 17 15 21 21 C 1.50693 * 109.47673 * 180.02562 * 20 19 17 22 22 C 1.38233 * 120.00294 * 269.72880 * 21 20 19 23 23 C 1.38230 * 120.00435 * 179.73603 * 22 21 20 24 24 C 1.38237 * 119.99996 * 0.55697 * 23 22 21 25 25 C 1.38241 * 119.99827 * 359.69268 * 24 23 22 26 26 C 1.38234 * 119.99799 * 0.02873 * 25 24 23 27 27 C 1.53781 * 87.07780 * 25.43096 * 15 14 12 28 28 C 1.36648 * 109.08517 * 359.64926 * 8 7 3 29 29 H 1.08997 * 109.47306 * 274.96321 * 1 2 3 30 30 H 1.09007 * 109.47226 * 34.96166 * 1 2 3 31 31 H 1.09000 * 109.47170 * 154.95944 * 1 2 3 32 32 H 1.08999 * 109.47160 * 6.53703 * 4 3 2 33 33 H 0.96701 * 113.99852 * 180.02562 * 5 4 3 34 34 H 1.48500 * 109.99994 * 60.00270 * 6 4 3 35 35 H 1.48500 * 109.99654 * 181.31716 * 6 4 3 36 36 H 0.97006 * 119.99922 * 0.28210 * 11 9 8 37 37 H 1.09005 * 113.61163 * 203.66586 * 14 12 11 38 38 H 1.08999 * 113.61333 * 334.56411 * 14 12 11 39 39 H 1.09006 * 109.47392 * 300.00204 * 20 19 17 40 40 H 1.09000 * 109.47501 * 59.99574 * 20 19 17 41 41 H 1.08006 * 119.99560 * 359.97438 * 22 21 20 42 42 H 1.07998 * 120.00396 * 180.27207 * 23 22 21 43 43 H 1.07997 * 120.00340 * 179.71936 * 24 23 22 44 44 H 1.07996 * 120.00234 * 179.97438 * 25 24 23 45 45 H 1.07998 * 120.00027 * 179.97438 * 26 25 24 46 46 H 1.09001 * 113.61311 * 220.02292 * 27 15 14 47 47 H 1.08998 * 113.61342 * 89.12242 * 27 15 14 48 48 H 1.08004 * 123.35205 * 180.24150 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6354 2.5162 0.0006 5 8 1.9423 3.1646 -1.2353 6 14 2.3555 3.4964 1.4118 7 16 3.8970 0.7892 0.0070 8 6 3.5937 -0.9427 -0.0009 9 6 4.6231 -1.9863 -0.0015 10 8 4.3001 -3.1597 -0.0017 11 7 5.9272 -1.6463 -0.0075 12 6 6.9560 -2.6892 -0.0141 13 1 6.6091 -3.6288 0.4159 14 6 7.6561 -2.8552 -1.3733 15 6 8.6619 -1.7915 -0.8934 16 1 8.3642 -0.7696 -1.1283 17 6 10.0873 -2.0896 -1.2816 18 8 10.8310 -2.6184 -0.4899 19 8 10.5303 -1.7676 -2.5071 20 6 11.9141 -2.0847 -2.8121 21 6 12.2296 -1.6532 -4.2210 22 6 12.0440 -2.5328 -5.2712 23 6 12.3283 -2.1353 -6.5642 24 6 12.8091 -0.8619 -6.8060 25 6 12.9996 0.0160 -5.7553 26 6 12.7098 -0.3797 -4.4628 27 6 8.3115 -2.2210 0.5411 28 6 2.2446 -1.1601 -0.0005 29 1 -0.3634 0.0889 1.0238 30 1 -0.3634 0.8423 -0.5889 31 1 -0.3633 -0.9311 -0.4350 32 1 0.5537 2.4512 0.1179 33 1 1.5935 4.0638 -1.3049 34 1 3.8299 3.5924 1.2633 35 1 1.7586 4.8558 1.4425 36 1 6.1846 -0.7110 -0.0073 37 1 8.0989 -3.8405 -1.5189 38 1 7.0488 -2.5337 -2.2194 39 1 12.5690 -1.5598 -2.1165 40 1 12.0701 -3.1593 -2.7172 41 1 11.6733 -3.5294 -5.0818 42 1 12.1791 -2.8210 -7.3852 43 1 13.0354 -0.5528 -7.8157 44 1 13.3755 1.0107 -5.9440 45 1 12.8590 0.3060 -3.6419 46 1 8.2330 -1.3877 1.2394 47 1 8.9332 -3.0331 0.9179 48 1 1.8019 -2.1452 -0.0010 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12636046_6739946.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:56:42 Heat of formation + Delta-G solvation = -65.071271 kcal Electronic energy + Delta-G solvation = -31677.532113 eV Core-core repulsion = 27177.637522 eV Total energy + Delta-G solvation = -4499.894592 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.122 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -42.04337 -41.00007 -40.21213 -39.80144 -38.92899 -37.69310 -37.31693 -34.45083 -33.19261 -32.45093 -31.90721 -30.00740 -28.75545 -27.29165 -26.94085 -26.21334 -24.33077 -23.59808 -22.76268 -22.18763 -21.96023 -20.55005 -19.91549 -19.38736 -18.71821 -18.63755 -18.20359 -17.52024 -17.47551 -17.35443 -16.89013 -16.29527 -16.19881 -16.01983 -15.90499 -15.85412 -15.37054 -14.92099 -14.82072 -14.65723 -14.43979 -14.40239 -14.12279 -14.05641 -13.89144 -13.75123 -13.48161 -13.41129 -13.37483 -13.19903 -13.00310 -12.93260 -12.69613 -12.26062 -12.18064 -12.12359 -11.93805 -11.87352 -11.81185 -11.64241 -11.33178 -11.11732 -10.82938 -10.25819 -9.91549 -9.86955 -9.68964 -9.43751 -5.14076 -0.63164 0.15709 0.33589 0.41028 0.77832 1.02389 1.16039 1.24899 1.41191 1.72965 1.77961 1.91434 2.14742 2.83491 3.04380 3.14423 3.22973 3.53306 3.55478 3.62810 3.70281 3.75007 3.76635 3.93649 4.04561 4.07324 4.11633 4.14448 4.17360 4.33699 4.34890 4.41466 4.43979 4.50228 4.55115 4.61044 4.63002 4.65814 4.68637 4.78543 4.81680 4.89865 4.93699 4.95470 5.02908 5.24820 5.36604 5.37384 5.38808 5.47222 5.52121 5.53054 5.96649 6.22436 6.29198 6.74239 7.06152 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C -0.098 4.098 3 C -0.185 4.185 4 C -0.044 4.044 5 O -0.533 6.533 6 Si 0.668 3.332 7 S 0.210 5.790 8 C -0.267 4.267 9 C 0.598 3.402 10 O -0.520 6.520 11 N -0.713 5.713 12 C 0.124 3.876 13 H 0.118 0.882 14 C -0.132 4.132 15 C -0.114 4.114 16 H 0.124 0.876 17 C 0.472 3.528 18 O -0.504 6.504 19 O -0.349 6.349 20 C 0.108 3.892 21 C -0.101 4.101 22 C -0.095 4.095 23 C -0.122 4.122 24 C -0.108 4.108 25 C -0.123 4.123 26 C -0.095 4.095 27 C -0.124 4.124 28 C -0.043 4.043 29 H 0.077 0.923 30 H 0.069 0.931 31 H 0.072 0.928 32 H 0.090 0.910 33 H 0.384 0.616 34 H -0.239 1.239 35 H -0.245 1.245 36 H 0.399 0.601 37 H 0.101 0.899 38 H 0.088 0.912 39 H 0.081 0.919 40 H 0.081 0.919 41 H 0.125 0.875 42 H 0.127 0.873 43 H 0.126 0.874 44 H 0.126 0.874 45 H 0.124 0.876 46 H 0.087 0.913 47 H 0.115 0.885 48 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.100 4.287 0.559 4.806 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C -0.111 4.111 3 C -0.304 4.304 4 C -0.155 4.155 5 O -0.341 6.341 6 Si 0.567 3.433 7 S 0.481 5.519 8 C -0.388 4.388 9 C 0.385 3.615 10 O -0.397 6.397 11 N -0.364 5.364 12 C 0.018 3.982 13 H 0.136 0.864 14 C -0.170 4.170 15 C -0.133 4.133 16 H 0.142 0.858 17 C 0.315 3.685 18 O -0.391 6.391 19 O -0.266 6.266 20 C 0.035 3.965 21 C -0.101 4.101 22 C -0.113 4.113 23 C -0.140 4.140 24 C -0.126 4.126 25 C -0.141 4.141 26 C -0.113 4.113 27 C -0.162 4.162 28 C -0.076 4.076 29 H 0.096 0.904 30 H 0.088 0.912 31 H 0.091 0.909 32 H 0.107 0.893 33 H 0.233 0.767 34 H -0.163 1.163 35 H -0.169 1.169 36 H 0.234 0.766 37 H 0.119 0.881 38 H 0.107 0.893 39 H 0.099 0.901 40 H 0.099 0.901 41 H 0.143 0.857 42 H 0.145 0.855 43 H 0.144 0.856 44 H 0.144 0.856 45 H 0.142 0.858 46 H 0.105 0.895 47 H 0.134 0.866 48 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 0.041 4.333 0.913 4.428 hybrid contribution -1.254 0.362 -1.148 1.738 sum -1.212 4.695 -0.235 4.855 Atomic orbital electron populations 1.20604 0.88936 1.03395 1.02874 1.18663 0.98169 0.90665 1.03619 1.23185 0.98365 0.98109 1.10783 1.24175 1.03146 0.92776 0.95389 1.86615 1.80258 1.32538 1.34715 0.94746 0.81811 0.81431 0.85352 1.83005 1.03654 0.97548 1.67741 1.24511 0.98026 0.97119 1.19133 1.16896 0.81380 0.87452 0.75767 1.90865 1.81482 1.18122 1.49256 1.45545 1.05117 1.09682 1.76072 1.21813 0.86946 0.92795 0.96612 0.86450 1.23458 0.95963 0.98763 0.98852 1.22729 0.88497 1.02809 0.99257 0.85776 1.23519 0.90401 0.75022 0.79587 1.90687 1.57442 1.39521 1.51437 1.86598 1.30563 1.75519 1.33893 1.21845 0.79746 1.01459 0.93425 1.19481 1.01932 0.95104 0.93596 1.21106 0.98262 0.99544 0.92362 1.21209 0.99438 0.96620 0.96768 1.21306 0.98033 0.93844 0.99406 1.21206 1.00276 1.00021 0.92568 1.21101 0.97872 0.94998 0.97359 1.23372 0.95201 1.03425 0.94172 1.20653 0.90819 0.99984 0.96170 0.90431 0.91188 0.90876 0.89257 0.76728 1.16280 1.16857 0.76591 0.88079 0.89338 0.90120 0.90095 0.85745 0.85538 0.85646 0.85561 0.85782 0.89468 0.86642 0.82498 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.18 9.48 36.00 0.34 0.52 16 2 C -0.10 -0.03 5.78 -106.45 -0.62 -0.64 16 3 C -0.19 -0.07 4.86 -35.86 -0.17 -0.25 16 4 C -0.04 0.05 2.76 36.01 0.10 0.15 16 5 O -0.53 0.07 12.86 -35.23 -0.45 -0.38 16 6 Si 0.67 -1.27 32.12 -169.99 -5.46 -6.73 16 7 S 0.21 0.05 20.82 -107.50 -2.24 -2.19 16 8 C -0.27 -0.43 6.45 -36.79 -0.24 -0.67 16 9 C 0.60 1.56 7.78 -12.90 -0.10 1.46 16 10 O -0.52 -3.11 16.46 5.19 0.09 -3.02 16 11 N -0.71 0.12 5.26 -54.35 -0.29 -0.17 16 12 C 0.12 -0.06 4.30 -67.11 -0.29 -0.35 16 13 H 0.12 0.07 7.50 -51.93 -0.39 -0.32 16 14 C -0.13 0.10 7.45 -25.77 -0.19 -0.09 16 15 C -0.11 0.10 4.15 -90.81 -0.38 -0.27 16 16 H 0.12 -0.32 8.14 -51.93 -0.42 -0.74 16 17 C 0.47 0.87 7.49 36.01 0.27 1.14 16 18 O -0.50 -2.19 15.65 -18.74 -0.29 -2.48 16 19 O -0.35 -0.73 10.20 -39.25 -0.40 -1.13 16 20 C 0.11 0.14 5.59 36.00 0.20 0.34 16 21 C -0.10 -0.14 5.52 -104.63 -0.58 -0.72 16 22 C -0.09 -0.09 9.70 -39.59 -0.38 -0.47 16 23 C -0.12 -0.06 10.05 -39.58 -0.40 -0.45 16 24 C -0.11 -0.03 10.05 -39.58 -0.40 -0.43 16 25 C -0.12 -0.05 10.05 -39.58 -0.40 -0.45 16 26 C -0.10 -0.08 9.70 -39.58 -0.38 -0.47 16 27 C -0.12 0.17 7.15 -25.92 -0.19 -0.02 16 28 C -0.04 -0.06 9.78 -40.44 -0.40 -0.45 16 29 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 30 H 0.07 -0.15 6.98 -51.93 -0.36 -0.51 16 31 H 0.07 -0.15 8.10 -51.93 -0.42 -0.57 16 32 H 0.09 -0.27 6.24 -51.93 -0.32 -0.59 16 33 H 0.38 -1.61 8.74 45.56 0.40 -1.21 16 34 H -0.24 -0.14 7.11 56.52 0.40 0.26 16 35 H -0.24 0.09 7.11 56.52 0.40 0.49 16 36 H 0.40 -0.85 7.82 -40.82 -0.32 -1.17 16 37 H 0.10 -0.09 8.10 -51.93 -0.42 -0.51 16 38 H 0.09 -0.04 8.14 -51.93 -0.42 -0.47 16 39 H 0.08 0.07 8.08 -51.93 -0.42 -0.35 16 40 H 0.08 0.07 8.08 -51.93 -0.42 -0.35 16 41 H 0.12 -0.05 8.06 -52.48 -0.42 -0.48 16 42 H 0.13 -0.17 8.06 -52.49 -0.42 -0.59 16 43 H 0.13 -0.19 8.06 -52.49 -0.42 -0.62 16 44 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 45 H 0.12 -0.07 8.06 -52.49 -0.42 -0.49 16 46 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 47 H 0.12 -0.06 7.43 -51.93 -0.39 -0.45 16 48 H 0.16 0.14 8.06 -52.48 -0.42 -0.28 16 LS Contribution 423.65 15.07 6.38 6.38 Total: 0.00 -9.35 423.65 -13.34 -22.69 By element: Atomic # 1 Polarization: -4.36 SS G_CDS: -6.49 Total: -10.85 kcal Atomic # 6 Polarization: 2.08 SS G_CDS: -4.19 Total: -2.12 kcal Atomic # 7 Polarization: 0.12 SS G_CDS: -0.29 Total: -0.17 kcal Atomic # 8 Polarization: -5.96 SS G_CDS: -1.06 Total: -7.02 kcal Atomic # 14 Polarization: -1.27 SS G_CDS: -5.46 Total: -6.73 kcal Atomic # 16 Polarization: 0.05 SS G_CDS: -2.24 Total: -2.19 kcal Total LS contribution 6.38 Total: 6.38 kcal Total: -9.35 -13.34 -22.69 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12636046_6739946.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.382 kcal (2) G-P(sol) polarization free energy of solvation -9.346 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.728 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.343 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.689 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.071 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds