Wall clock time and date at job start Sat Mar 6 2021 21:14:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34230 * 116.99986 * 2 1 4 4 O 1.20820 * 120.00381 * 359.97438 * 3 2 1 5 5 C 1.50707 * 120.00029 * 179.97438 * 3 2 1 6 6 N 1.46496 * 112.85009 * 334.66929 * 5 3 2 7 7 C 1.34774 * 119.99977 * 50.32941 * 6 5 3 8 8 O 1.21281 * 120.00291 * 359.97438 * 7 6 5 9 9 C 1.50706 * 120.00125 * 180.02562 * 7 6 5 10 10 N 1.46502 * 109.47233 * 180.02562 * 9 7 6 11 11 C 1.35033 * 125.93005 * 125.00136 * 10 9 7 12 12 C 1.35085 * 107.98016 * 179.97438 * 11 10 9 13 13 C 1.50704 * 126.07781 * 179.97438 * 12 11 10 14 14 O 1.42899 * 109.47105 * 105.24806 * 13 12 11 15 15 Si 1.86300 * 109.46939 * 345.24972 * 13 12 11 16 16 C 1.40853 * 107.84739 * 359.97438 * 12 11 10 17 17 C 1.48410 * 126.04044 * 179.97438 * 16 12 11 18 18 C 1.39359 * 120.05892 * 316.94480 * 17 16 12 19 19 C 1.37922 * 119.93153 * 179.72098 * 18 17 16 20 20 C 1.38824 * 120.06539 * 0.57450 * 19 18 17 21 21 O 1.35886 * 119.93640 * 179.69910 * 20 19 18 22 22 C 1.42896 * 116.99839 * 359.97438 * 21 20 19 23 23 C 1.38817 * 120.12519 * 359.68015 * 20 19 18 24 24 C 1.37923 * 120.06522 * 0.03901 * 23 20 19 25 25 N 1.31626 * 107.92344 * 0.24340 * 16 12 11 26 26 C 1.53781 * 113.61518 * 203.46911 * 5 3 2 27 27 C 1.53782 * 87.07957 * 270.80114 * 26 5 3 28 28 H 1.09005 * 113.61321 * 89.11673 * 27 26 5 29 29 O 1.42903 * 113.61274 * 219.93087 * 27 26 5 30 30 C 1.53781 * 113.61125 * 105.86285 * 5 3 2 31 31 H 1.08998 * 109.46680 * 59.99998 * 1 2 3 32 32 H 1.08998 * 109.47073 * 179.97438 * 1 2 3 33 33 H 1.09004 * 109.47186 * 300.00582 * 1 2 3 34 34 H 0.96996 * 119.99962 * 230.33490 * 6 5 3 35 35 H 1.08996 * 109.46970 * 59.99667 * 9 7 6 36 36 H 1.08998 * 109.46751 * 300.00127 * 9 7 6 37 37 H 1.08004 * 126.00704 * 359.91866 * 11 10 9 38 38 H 1.08994 * 109.46704 * 225.25241 * 13 12 11 39 39 H 0.96693 * 114.00194 * 180.02562 * 14 13 12 40 40 H 1.48506 * 109.99881 * 59.99809 * 15 13 12 41 41 H 1.48495 * 109.99843 * 181.31834 * 15 13 12 42 42 H 1.07998 * 120.03535 * 359.97130 * 18 17 16 43 43 H 1.08000 * 119.97007 * 180.25332 * 19 18 17 44 44 H 1.08992 * 109.47544 * 300.00150 * 22 21 20 45 45 H 1.09002 * 109.47053 * 60.00674 * 22 21 20 46 46 H 1.09000 * 109.46938 * 179.97438 * 22 21 20 47 47 H 1.07999 * 119.97081 * 180.02562 * 23 20 19 48 48 H 1.07998 * 120.03185 * 179.97438 * 24 23 20 49 49 H 1.08999 * 113.61502 * 25.34727 * 26 5 3 50 50 H 1.08994 * 113.61093 * 156.16743 * 26 5 3 51 51 H 0.96698 * 113.99579 * 180.02562 * 29 27 26 52 52 H 1.08999 * 113.61622 * 203.74980 * 30 5 3 53 53 H 1.09004 * 113.61212 * 334.65317 * 30 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2749 0.0006 6 7 4.1981 0.0863 0.5787 7 6 3.8371 -1.1416 0.1562 8 8 2.9889 -1.2625 -0.7022 9 6 4.4866 -2.3644 0.7513 10 7 3.9266 -3.5666 0.1289 11 6 4.6304 -4.5441 -0.4815 12 6 3.7560 -5.4743 -0.9228 13 6 4.1048 -6.7399 -1.6628 14 8 3.9741 -7.8579 -0.7825 15 14 5.8602 -6.6358 -2.2780 16 6 2.4601 -5.0512 -0.5683 17 6 1.1961 -5.7728 -0.8581 18 6 0.9932 -6.3503 -2.1100 19 6 -0.1801 -7.0253 -2.3746 20 6 -1.1634 -7.1195 -1.3992 21 8 -2.3209 -7.7799 -1.6647 22 6 -2.4576 -8.3514 -2.9673 23 6 -0.9662 -6.5407 -0.1530 24 6 0.2075 -5.8694 0.1192 25 7 2.5678 -3.8997 0.0603 26 6 4.1137 2.5979 0.5617 27 6 4.0343 3.1479 -0.8723 28 1 3.0737 3.6035 -1.1126 29 8 5.1448 3.9724 -1.2314 30 6 4.1619 1.6915 -1.3547 31 1 -0.3632 0.5138 -0.8900 32 1 -0.3633 -1.0276 -0.0005 33 1 -0.3634 0.5139 0.8900 34 1 4.8762 0.1829 1.2655 35 1 4.2989 -2.3895 1.8247 36 1 5.5610 -2.3292 0.5710 37 1 5.7038 -4.5760 -0.5973 38 1 3.4298 -6.8634 -2.5096 39 1 4.1840 -8.7081 -1.1925 40 1 6.7905 -6.4672 -1.1328 41 1 6.2061 -7.8644 -3.0368 42 1 1.7556 -6.2728 -2.8710 43 1 -0.3362 -7.4766 -3.3433 44 1 -2.3906 -7.5643 -3.7183 45 1 -1.6617 -9.0781 -3.1306 46 1 -3.4245 -8.8482 -3.0465 47 1 -1.7327 -6.6159 0.6042 48 1 0.3601 -5.4190 1.0889 49 1 3.4346 3.0916 1.2568 50 1 5.1309 2.5217 0.9458 51 1 5.1003 4.3215 -2.1321 52 1 5.1928 1.3673 -1.4968 53 1 3.5215 1.4543 -2.2043 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12808048_12622750.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:14:42 Heat of formation + Delta-G solvation = -72.062984 kcal Electronic energy + Delta-G solvation = -41583.673351 eV Core-core repulsion = 36198.795644 eV Total energy + Delta-G solvation = -5384.877706 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.171 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -42.61537 -42.31901 -40.99967 -40.39045 -39.65850 -38.42853 -37.71381 -37.48542 -36.42543 -34.64288 -33.93274 -32.34602 -31.98844 -31.12456 -29.40753 -28.79761 -27.96455 -27.15215 -26.38686 -25.62833 -23.94933 -23.62911 -23.14099 -21.73913 -21.42457 -20.80313 -20.70354 -19.45731 -19.17141 -18.53072 -18.38473 -18.21505 -18.06912 -17.65947 -17.46751 -17.10189 -16.85593 -16.67111 -16.57902 -16.27133 -15.84046 -15.60480 -15.38654 -15.30675 -15.08586 -14.90431 -14.78045 -14.58328 -14.50073 -14.40705 -14.20864 -13.84940 -13.73815 -13.66870 -13.62103 -13.41966 -13.31803 -13.05727 -12.96595 -12.76937 -12.67522 -12.60902 -12.25550 -12.08675 -11.98879 -11.84681 -11.80360 -11.64077 -11.46407 -11.11458 -10.91276 -10.40365 -10.26919 -10.20290 -10.02247 -9.60363 -8.93683 -4.83582 0.12472 0.33524 0.79746 0.90513 1.31021 1.42617 1.54421 1.63456 1.66722 1.70304 1.99192 2.02452 2.33606 2.78278 2.95699 3.16345 3.27267 3.37065 3.49691 3.59784 3.66051 3.76392 3.77225 3.84955 3.89725 3.99075 4.08819 4.11480 4.16532 4.18096 4.20479 4.24835 4.31427 4.38400 4.40366 4.52051 4.53253 4.56710 4.57887 4.59799 4.67906 4.71975 4.72949 4.78331 4.91206 4.93513 5.02941 5.08555 5.20776 5.26675 5.31504 5.52686 5.57374 5.69656 5.95508 6.39324 6.44335 6.54771 6.66404 6.73763 6.77833 7.22013 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.317 6.317 3 C 0.466 3.534 4 O -0.531 6.531 5 C 0.158 3.842 6 N -0.699 5.699 7 C 0.490 3.510 8 O -0.506 6.506 9 C 0.114 3.886 10 N -0.358 5.358 11 C 0.074 3.926 12 C -0.227 4.227 13 C -0.051 4.051 14 O -0.558 6.558 15 Si 0.766 3.234 16 C 0.115 3.885 17 C -0.056 4.056 18 C -0.058 4.058 19 C -0.205 4.205 20 C 0.121 3.879 21 O -0.336 6.336 22 C 0.017 3.983 23 C -0.164 4.164 24 C -0.064 4.064 25 N -0.283 5.283 26 C -0.101 4.101 27 C 0.083 3.917 28 H 0.083 0.917 29 O -0.563 6.563 30 C -0.147 4.147 31 H 0.056 0.944 32 H 0.106 0.894 33 H 0.062 0.938 34 H 0.429 0.571 35 H 0.136 0.864 36 H 0.179 0.821 37 H 0.212 0.788 38 H 0.077 0.923 39 H 0.388 0.612 40 H -0.277 1.277 41 H -0.289 1.289 42 H 0.145 0.855 43 H 0.155 0.845 44 H 0.066 0.934 45 H 0.067 0.933 46 H 0.116 0.884 47 H 0.137 0.863 48 H 0.126 0.874 49 H 0.087 0.913 50 H 0.140 0.860 51 H 0.399 0.601 52 H 0.128 0.872 53 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.596 -0.092 -2.587 8.025 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.231 6.231 3 C 0.309 3.691 4 O -0.421 6.421 5 C 0.068 3.932 6 N -0.358 5.358 7 C 0.275 3.725 8 O -0.379 6.379 9 C -0.010 4.010 10 N -0.140 5.140 11 C -0.071 4.071 12 C -0.238 4.238 13 C -0.160 4.160 14 O -0.367 6.367 15 Si 0.669 3.331 16 C -0.051 4.051 17 C -0.059 4.059 18 C -0.077 4.077 19 C -0.223 4.223 20 C 0.075 3.925 21 O -0.250 6.250 22 C -0.077 4.077 23 C -0.183 4.183 24 C -0.083 4.083 25 N -0.104 5.104 26 C -0.139 4.139 27 C 0.023 3.977 28 H 0.100 0.900 29 O -0.371 6.371 30 C -0.186 4.186 31 H 0.075 0.925 32 H 0.124 0.876 33 H 0.081 0.919 34 H 0.269 0.731 35 H 0.154 0.846 36 H 0.196 0.804 37 H 0.229 0.771 38 H 0.095 0.905 39 H 0.237 0.763 40 H -0.203 1.203 41 H -0.216 1.216 42 H 0.163 0.837 43 H 0.173 0.827 44 H 0.084 0.916 45 H 0.086 0.914 46 H 0.134 0.866 47 H 0.155 0.845 48 H 0.144 0.856 49 H 0.105 0.895 50 H 0.158 0.842 51 H 0.250 0.750 52 H 0.146 0.854 53 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 6.829 1.119 -1.392 7.059 hybrid contribution -0.667 -1.581 -0.420 1.767 sum 6.162 -0.462 -1.812 6.440 Atomic orbital electron populations 1.23343 0.76968 1.04194 1.01929 1.87045 1.22984 1.31092 1.81968 1.23829 0.91841 0.81841 0.71617 1.90670 1.67110 1.37298 1.47041 1.20922 0.84660 0.87974 0.99600 1.45590 1.43521 1.02898 1.43801 1.21052 0.82951 0.85084 0.83400 1.90868 1.30178 1.85748 1.31071 1.21912 1.01067 0.78406 0.99627 1.48063 1.03888 1.17666 1.44337 1.22700 0.99656 0.88990 0.95791 1.19566 0.91565 0.99633 1.13029 1.24435 1.13329 0.84037 0.94212 1.86607 1.91141 1.17724 1.41210 0.94327 0.71833 0.86401 0.80527 1.20696 0.93596 0.92550 0.98218 1.17828 0.91788 1.01063 0.95181 1.21117 0.96861 0.94344 0.95412 1.21388 0.94622 1.05707 1.00621 1.19278 0.85990 0.92849 0.94363 1.86055 1.35063 1.67569 1.36286 1.23357 1.04639 0.98360 0.81358 1.20484 0.99166 1.02484 0.96123 1.21002 0.91890 0.96459 0.98975 1.77736 0.95343 1.14472 1.22848 1.23349 1.04242 0.89330 0.96934 1.23101 0.90205 0.88815 0.95604 0.89963 1.86445 1.44384 1.68314 1.37998 1.24111 1.03340 0.96779 0.94399 0.92479 0.87587 0.91882 0.73141 0.84613 0.80423 0.77148 0.90485 0.76266 1.20282 1.21566 0.83739 0.82725 0.91561 0.91437 0.86610 0.84477 0.85626 0.89451 0.84229 0.75031 0.85350 0.91673 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.23 10.56 113.37 1.20 1.42 16 2 O -0.32 -3.30 6.31 -43.44 -0.27 -3.58 16 3 C 0.47 3.73 6.98 71.24 0.50 4.23 16 4 O -0.53 -6.50 14.99 21.98 0.33 -6.17 16 5 C 0.16 -0.08 1.22 3.39 0.00 -0.08 16 6 N -0.70 4.26 5.32 -423.91 -2.25 2.00 16 7 C 0.49 -0.44 7.21 87.66 0.63 0.19 16 8 O -0.51 -4.73 12.22 21.09 0.26 -4.47 16 9 C 0.11 -0.81 6.99 85.63 0.60 -0.21 16 10 N -0.36 -0.83 3.40 -351.91 -1.20 -2.03 16 11 C 0.07 0.01 9.96 83.47 0.83 0.84 16 12 C -0.23 -1.11 5.39 -19.95 -0.11 -1.22 16 13 C -0.05 -0.05 2.50 71.24 0.18 0.13 16 14 O -0.56 -2.37 12.86 -148.98 -1.92 -4.28 16 15 Si 0.77 -2.86 30.77 68.60 2.11 -0.75 16 16 C 0.11 1.15 6.66 42.53 0.28 1.44 16 17 C -0.06 -0.56 5.74 -20.03 -0.11 -0.68 16 18 C -0.06 -0.34 8.88 22.46 0.20 -0.14 16 19 C -0.20 -0.93 9.02 22.33 0.20 -0.73 16 20 C 0.12 0.95 6.69 22.55 0.15 1.10 16 21 O -0.34 -2.27 10.49 -92.27 -0.97 -3.24 16 22 C 0.02 -0.03 9.81 113.37 1.11 1.08 16 23 C -0.16 -1.47 9.97 22.33 0.22 -1.24 16 24 C -0.06 -0.65 9.77 22.46 0.22 -0.43 16 25 N -0.28 -3.01 11.66 -48.16 -0.56 -3.57 16 26 C -0.10 0.35 6.96 31.12 0.22 0.56 16 27 C 0.08 -0.09 4.80 31.18 0.15 0.06 16 28 H 0.08 0.17 7.33 -2.38 -0.02 0.15 16 29 O -0.56 1.11 13.68 -148.98 -2.04 -0.93 16 30 C -0.15 0.24 7.30 31.18 0.23 0.47 16 31 H 0.06 0.45 8.13 -2.39 -0.02 0.43 16 32 H 0.11 0.66 8.14 -2.39 -0.02 0.64 16 33 H 0.06 0.39 8.13 -2.38 -0.02 0.37 16 34 H 0.43 -6.18 8.64 -92.71 -0.80 -6.98 16 35 H 0.14 -1.44 8.14 -2.39 -0.02 -1.46 16 36 H 0.18 -3.12 8.07 -2.39 -0.02 -3.14 16 37 H 0.21 -1.74 6.35 -2.91 -0.02 -1.76 16 38 H 0.08 -0.10 5.57 -2.39 -0.01 -0.11 16 39 H 0.39 -1.43 8.74 -74.06 -0.65 -2.08 16 40 H -0.28 0.00 7.04 99.48 0.70 0.70 16 41 H -0.29 -0.28 7.11 99.48 0.71 0.42 16 42 H 0.15 0.23 6.23 -2.91 -0.02 0.21 16 43 H 0.16 -0.19 6.28 -2.91 -0.02 -0.21 16 44 H 0.07 -0.24 7.66 -2.39 -0.02 -0.26 16 45 H 0.07 -0.26 7.65 -2.39 -0.02 -0.28 16 46 H 0.12 -0.58 8.14 -2.39 -0.02 -0.60 16 47 H 0.14 0.91 8.06 -2.91 -0.02 0.89 16 48 H 0.13 1.21 8.06 -2.91 -0.02 1.19 16 49 H 0.09 -0.11 7.84 -2.39 -0.02 -0.13 16 50 H 0.14 -1.22 8.13 -2.39 -0.02 -1.24 16 51 H 0.40 -3.63 9.12 -74.06 -0.68 -4.30 16 52 H 0.13 -0.65 8.14 -2.39 -0.02 -0.67 16 53 H 0.06 0.14 8.09 -2.38 -0.02 0.12 16 Total: 0.00 -37.43 442.89 -0.89 -38.32 By element: Atomic # 1 Polarization: -17.01 SS G_CDS: -1.08 Total: -18.09 kcal Atomic # 6 Polarization: 0.09 SS G_CDS: 6.70 Total: 6.78 kcal Atomic # 7 Polarization: 0.41 SS G_CDS: -4.01 Total: -3.60 kcal Atomic # 8 Polarization: -18.05 SS G_CDS: -4.61 Total: -22.66 kcal Atomic # 14 Polarization: -2.86 SS G_CDS: 2.11 Total: -0.75 kcal Total: -37.43 -0.89 -38.32 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_12622750.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.740 kcal (2) G-P(sol) polarization free energy of solvation -37.432 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.172 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.891 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.322 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.063 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds