Wall clock time and date at job start Sat Mar 6 2021 21:16:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34225 * 117.00149 * 2 1 4 4 O 1.20825 * 120.00325 * 359.97438 * 3 2 1 5 5 C 1.50704 * 119.99863 * 180.02562 * 3 2 1 6 6 N 1.46501 * 112.90866 * 24.85694 * 5 3 2 7 7 C 1.34777 * 119.99758 * 66.30443 * 6 5 3 8 8 O 1.21702 * 120.00445 * 5.01416 * 7 6 5 9 9 C 1.46662 * 119.99910 * 185.01503 * 7 6 5 10 10 C 1.36542 * 125.98491 * 179.71581 * 9 7 6 11 11 C 1.50696 * 126.65012 * 359.96219 * 10 9 7 12 12 C 1.40370 * 106.70533 * 179.85479 * 10 9 7 13 13 C 1.35137 * 107.11240 * 0.40791 * 12 10 9 14 14 C 1.50704 * 125.61247 * 179.70875 * 13 12 10 15 15 O 1.42898 * 109.46496 * 90.02315 * 14 13 12 16 16 C 1.35904 * 116.99583 * 179.97438 * 15 14 13 17 17 C 1.38737 * 120.05310 * 359.72149 * 16 15 14 18 18 C 1.38150 * 119.93945 * 179.74313 * 17 16 15 19 19 C 1.38265 * 120.05739 * 0.51568 * 18 17 16 20 20 C 1.50697 * 119.94615 * 179.74390 * 19 18 17 21 21 O 1.42895 * 109.47168 * 245.01765 * 20 19 18 22 22 Si 1.86302 * 109.46849 * 5.01726 * 20 19 18 23 23 C 1.38269 * 120.11178 * 359.75654 * 19 18 17 24 24 C 1.38151 * 120.05316 * 359.97438 * 23 19 18 25 25 O 1.33927 * 108.76848 * 359.75059 * 13 12 10 26 26 C 1.53955 * 113.61233 * 253.52982 * 5 3 2 27 27 C 1.53781 * 87.11081 * 270.84467 * 26 5 3 28 28 H 1.08995 * 113.69107 * 89.20501 * 27 26 5 29 29 O 1.42907 * 113.60966 * 220.08971 * 27 26 5 30 30 C 1.53782 * 113.61188 * 156.10565 * 5 3 2 31 31 H 1.08998 * 109.47388 * 180.02562 * 1 2 3 32 32 H 1.09002 * 109.47196 * 300.00319 * 1 2 3 33 33 H 1.08998 * 109.47197 * 59.99516 * 1 2 3 34 34 H 0.96992 * 119.99833 * 246.30776 * 6 5 3 35 35 H 1.09000 * 109.47031 * 89.99998 * 11 10 9 36 36 H 1.09001 * 109.47432 * 209.99898 * 11 10 9 37 37 H 1.09002 * 109.47330 * 330.00043 * 11 10 9 38 38 H 1.08003 * 126.44420 * 180.15609 * 12 10 9 39 39 H 1.09003 * 109.46440 * 210.01354 * 14 13 12 40 40 H 1.08990 * 109.47292 * 330.01753 * 14 13 12 41 41 H 1.07993 * 120.03093 * 359.97438 * 17 16 15 42 42 H 1.08003 * 119.97143 * 180.22925 * 18 17 16 43 43 H 1.08999 * 109.47231 * 125.01651 * 20 19 18 44 44 H 0.96697 * 113.99841 * 59.99637 * 21 20 19 45 45 H 1.48511 * 109.99801 * 179.97438 * 22 20 19 46 46 H 1.48501 * 110.00045 * 301.31954 * 22 20 19 47 47 H 1.07998 * 119.97211 * 179.97438 * 23 19 18 48 48 H 1.07997 * 120.02576 * 179.97438 * 24 23 19 49 49 H 1.08998 * 113.53472 * 156.29139 * 26 5 3 50 50 H 1.08998 * 113.66786 * 25.41529 * 26 5 3 51 51 H 0.96691 * 114.00120 * 277.49683 * 29 27 26 52 52 H 1.08997 * 113.61910 * 334.57516 * 30 5 3 53 53 H 1.09000 * 113.61263 * 203.74308 * 30 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2747 -0.0006 6 7 4.1997 0.0819 -0.5683 7 6 4.0442 -0.2059 -1.8758 8 8 3.4553 0.5711 -2.6042 9 6 4.5848 -1.4556 -2.4209 10 6 4.4935 -1.8706 -3.7185 11 6 3.8233 -1.1382 -4.8522 12 6 5.1471 -3.1107 -3.7924 13 6 5.5950 -3.3987 -2.5504 14 6 6.3524 -4.6408 -2.1567 15 8 7.7547 -4.4110 -2.3069 16 6 8.5856 -5.4390 -1.9908 17 6 8.0621 -6.6420 -1.5397 18 6 8.9086 -7.6871 -1.2241 19 6 10.2769 -7.5315 -1.3473 20 6 11.1983 -8.6713 -0.9968 21 8 11.9970 -8.3086 0.1312 22 14 10.1885 -10.1812 -0.5829 23 6 10.8014 -6.3316 -1.7913 24 6 9.9589 -5.2853 -2.1135 25 8 5.2541 -2.3992 -1.7268 26 6 4.1618 1.7061 1.3520 27 6 4.0338 3.1566 0.8576 28 1 3.0739 3.6163 1.0926 29 8 5.1457 3.9819 1.2108 30 6 4.1139 2.5936 -0.5713 31 1 -0.3634 -1.0276 0.0005 32 1 -0.3634 0.5139 0.8900 33 1 -0.3633 0.5139 -0.8899 34 1 4.7307 -0.5007 -0.0033 35 1 4.5463 -0.4847 -5.3403 36 1 3.4397 -1.8591 -5.5742 37 1 2.9990 -0.5410 -4.4621 38 1 5.2658 -3.7218 -4.6750 39 1 6.1336 -4.8855 -1.1173 40 1 6.0492 -5.4693 -2.7967 41 1 6.9937 -6.7625 -1.4390 42 1 8.5014 -8.6251 -0.8764 43 1 11.8462 -8.8890 -1.8458 44 1 11.4853 -8.1008 0.9249 45 1 11.0856 -11.3128 -0.2360 46 1 9.2779 -9.8876 0.5528 47 1 11.8706 -6.2124 -1.8863 48 1 10.3690 -4.3482 -2.4598 49 1 5.1929 1.3834 1.4965 50 1 3.5223 1.4774 2.2045 51 1 5.1010 4.3390 2.1083 52 1 3.4357 3.0814 -1.2713 53 1 5.1318 2.5149 -0.9531 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12808048_4549632.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:16:17 Heat of formation + Delta-G solvation = -149.006979 kcal Electronic energy + Delta-G solvation = -39973.471715 eV Core-core repulsion = 34552.964716 eV Total energy + Delta-G solvation = -5420.506999 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.164 amu Computer time = 1.73 seconds Orbital eigenvalues (eV) -43.96916 -42.63994 -41.27868 -40.66542 -39.71495 -39.23633 -37.67027 -37.29568 -36.67161 -35.32783 -34.25072 -33.12721 -32.03116 -31.51388 -29.46111 -28.90448 -28.34756 -27.25611 -26.36714 -26.07634 -24.21349 -23.52547 -22.74813 -22.46686 -22.22322 -20.96747 -20.79880 -19.55202 -19.46226 -19.31397 -18.43614 -18.36242 -17.94472 -17.64743 -17.48611 -17.38075 -17.04496 -16.85007 -16.64322 -16.26130 -16.06914 -15.81795 -15.70342 -15.53282 -15.40254 -14.84368 -14.71151 -14.64200 -14.50196 -14.37316 -14.25400 -14.12650 -13.92092 -13.79212 -13.69275 -13.66269 -13.47699 -13.45674 -13.42905 -13.24096 -12.83983 -12.73152 -12.29931 -12.11481 -12.05676 -12.01796 -11.98645 -11.85026 -11.58559 -11.35942 -11.09459 -10.82093 -10.61854 -10.56625 -10.01185 -9.76948 -9.22715 -4.89807 -0.31520 0.29576 0.33485 0.73761 0.94024 1.26211 1.34855 1.37320 1.61198 1.72298 1.90217 1.99095 2.36237 2.67054 2.90245 3.04432 3.23340 3.30526 3.38170 3.47022 3.50743 3.61939 3.69751 3.73410 3.82386 3.95949 4.00241 4.05156 4.10465 4.13614 4.18717 4.27721 4.33248 4.42102 4.43961 4.47903 4.48805 4.56400 4.57559 4.58255 4.61145 4.67265 4.70186 4.72969 4.73817 4.95479 4.98498 5.00060 5.07205 5.14960 5.18239 5.28256 5.31788 5.52542 5.62631 5.71715 6.14496 6.30688 6.39332 6.52089 6.74444 6.79697 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.356 6.356 3 C 0.478 3.522 4 O -0.517 6.517 5 C 0.151 3.849 6 N -0.688 5.688 7 C 0.609 3.391 8 O -0.535 6.535 9 C -0.093 4.093 10 C -0.090 4.090 11 C -0.095 4.095 12 C -0.186 4.186 13 C 0.015 3.985 14 C 0.135 3.865 15 O -0.326 6.326 16 C 0.126 3.874 17 C -0.201 4.201 18 C -0.079 4.079 19 C -0.157 4.157 20 C -0.080 4.080 21 O -0.551 6.551 22 Si 0.768 3.232 23 C -0.060 4.060 24 C -0.162 4.162 25 O -0.158 6.158 26 C -0.134 4.134 27 C 0.087 3.913 28 H 0.096 0.904 29 O -0.566 6.566 30 C -0.112 4.112 31 H 0.131 0.869 32 H 0.072 0.928 33 H 0.056 0.944 34 H 0.425 0.575 35 H 0.077 0.923 36 H 0.090 0.910 37 H 0.068 0.932 38 H 0.185 0.815 39 H 0.103 0.897 40 H 0.133 0.867 41 H 0.160 0.840 42 H 0.148 0.852 43 H 0.122 0.878 44 H 0.385 0.615 45 H -0.309 1.309 46 H -0.279 1.279 47 H 0.134 0.866 48 H 0.132 0.868 49 H 0.136 0.864 50 H 0.105 0.895 51 H 0.402 0.598 52 H 0.071 0.929 53 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.679 -6.431 2.235 7.012 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.271 6.271 3 C 0.320 3.680 4 O -0.405 6.405 5 C 0.062 3.938 6 N -0.342 5.342 7 C 0.397 3.603 8 O -0.414 6.414 9 C -0.145 4.145 10 C -0.093 4.093 11 C -0.152 4.152 12 C -0.205 4.205 13 C -0.037 4.037 14 C 0.061 3.939 15 O -0.241 6.241 16 C 0.081 3.919 17 C -0.220 4.220 18 C -0.096 4.096 19 C -0.158 4.158 20 C -0.189 4.189 21 O -0.359 6.359 22 Si 0.674 3.326 23 C -0.079 4.079 24 C -0.181 4.181 25 O -0.055 6.055 26 C -0.171 4.171 27 C 0.027 3.973 28 H 0.114 0.886 29 O -0.375 6.375 30 C -0.150 4.150 31 H 0.149 0.851 32 H 0.091 0.909 33 H 0.075 0.925 34 H 0.264 0.736 35 H 0.096 0.904 36 H 0.109 0.891 37 H 0.087 0.913 38 H 0.203 0.797 39 H 0.121 0.879 40 H 0.150 0.850 41 H 0.177 0.823 42 H 0.165 0.835 43 H 0.140 0.860 44 H 0.235 0.765 45 H -0.237 1.237 46 H -0.205 1.205 47 H 0.152 0.848 48 H 0.149 0.851 49 H 0.154 0.846 50 H 0.124 0.876 51 H 0.253 0.747 52 H 0.090 0.910 53 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges -1.813 -6.196 1.573 6.645 hybrid contribution -0.026 0.752 1.477 1.658 sum -1.838 -5.444 3.050 6.505 Atomic orbital electron populations 1.23593 0.74392 1.05840 1.02709 1.86496 1.25188 1.32329 1.83131 1.23448 0.91232 0.81756 0.71589 1.90680 1.66698 1.37048 1.46062 1.21168 0.84988 0.87092 1.00539 1.45512 1.52670 1.26882 1.09137 1.16659 0.78443 0.82947 0.82224 1.90887 1.43201 1.48116 1.59156 1.21586 1.07944 0.92780 0.92160 1.20960 0.98460 0.95768 0.94130 1.20455 1.00225 0.99884 0.94619 1.21897 1.02568 0.97361 0.98645 1.22437 1.01098 0.90969 0.89194 1.21279 0.77185 0.90445 1.04964 1.86110 1.17263 1.37884 1.82828 1.19083 0.90109 0.87130 0.95535 1.21476 1.02043 0.92625 1.05815 1.21078 0.92278 0.98958 0.97306 1.20251 0.94485 0.96627 1.04416 1.25186 0.99160 1.02902 0.91657 1.86575 1.37068 1.89628 1.22657 0.94120 0.78253 0.73571 0.86683 1.20939 1.00080 0.91573 0.95266 1.20632 0.90579 1.00976 1.05920 1.83958 1.57295 1.25757 1.38485 1.24070 1.04328 0.96073 0.92662 1.23105 0.90643 0.89241 0.94302 0.88621 1.86490 1.44284 1.68116 1.38594 1.23324 1.02605 0.91459 0.97609 0.85137 0.90946 0.92537 0.73591 0.90418 0.89096 0.91302 0.79737 0.87874 0.84975 0.82263 0.83459 0.86046 0.76544 1.23726 1.20504 0.84815 0.85053 0.84610 0.87632 0.74717 0.90998 0.87449 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.02 10.56 113.37 1.20 1.22 16 2 O -0.36 -2.03 10.26 -51.37 -0.53 -2.56 16 3 C 0.48 3.56 6.52 71.24 0.46 4.03 16 4 O -0.52 -6.16 14.99 21.97 0.33 -5.83 16 5 C 0.15 0.43 1.13 3.44 0.00 0.43 16 6 N -0.69 -1.25 5.02 -427.57 -2.15 -3.40 16 7 C 0.61 4.42 7.41 86.44 0.64 5.07 16 8 O -0.53 -6.98 13.78 -4.35 -0.06 -7.04 16 9 C -0.09 -0.51 7.13 24.07 0.17 -0.33 16 10 C -0.09 -0.37 6.20 -19.74 -0.12 -0.50 16 11 C -0.10 -0.29 9.81 71.23 0.70 0.41 16 12 C -0.19 0.07 10.73 22.07 0.24 0.31 16 13 C 0.01 -0.01 6.94 24.97 0.17 0.16 16 14 C 0.14 -0.81 5.27 71.24 0.38 -0.43 16 15 O -0.33 0.00 10.12 -92.47 -0.94 -0.94 16 16 C 0.13 -0.08 6.69 22.51 0.15 0.07 16 17 C -0.20 0.95 9.04 22.37 0.20 1.15 16 18 C -0.08 0.34 8.66 22.26 0.19 0.53 16 19 C -0.16 0.29 5.35 -19.85 -0.11 0.18 16 20 C -0.08 0.17 2.80 71.23 0.20 0.36 16 21 O -0.55 -0.88 12.83 -148.98 -1.91 -2.80 16 22 Si 0.77 -2.93 29.88 68.60 2.05 -0.88 16 23 C -0.06 0.00 9.68 22.26 0.22 0.22 16 24 C -0.16 -0.13 9.99 22.37 0.22 0.10 16 25 O -0.16 -0.40 10.41 -5.02 -0.05 -0.45 16 26 C -0.13 0.50 7.22 31.18 0.23 0.73 16 27 C 0.09 0.06 4.80 31.12 0.15 0.21 16 28 H 0.10 0.15 7.32 -2.39 -0.02 0.14 16 29 O -0.57 -0.17 13.67 -148.98 -2.04 -2.21 16 30 C -0.11 -0.59 6.16 31.12 0.19 -0.39 16 31 H 0.13 -0.66 8.14 -2.39 -0.02 -0.68 16 32 H 0.07 -0.04 8.13 -2.39 -0.02 -0.06 16 33 H 0.06 0.16 8.13 -2.39 -0.02 0.14 16 34 H 0.42 -1.41 8.47 -92.71 -0.79 -2.20 16 35 H 0.08 0.22 8.14 -2.39 -0.02 0.20 16 36 H 0.09 -0.13 8.14 -2.39 -0.02 -0.15 16 37 H 0.07 0.49 6.45 -2.39 -0.02 0.48 16 38 H 0.19 -1.07 8.06 -2.91 -0.02 -1.09 16 39 H 0.10 -0.96 7.65 -2.39 -0.02 -0.98 16 40 H 0.13 -1.57 7.68 -2.39 -0.02 -1.59 16 41 H 0.16 -1.71 6.30 -2.91 -0.02 -1.73 16 42 H 0.15 -1.22 4.83 -2.91 -0.01 -1.24 16 43 H 0.12 -0.39 7.96 -2.39 -0.02 -0.41 16 44 H 0.39 -1.55 8.70 -74.06 -0.64 -2.20 16 45 H -0.31 -1.49 7.11 99.48 0.71 -0.78 16 46 H -0.28 0.26 7.00 99.48 0.70 0.96 16 47 H 0.13 -0.13 8.06 -2.91 -0.02 -0.15 16 48 H 0.13 0.04 8.06 -2.91 -0.02 0.02 16 49 H 0.14 -0.97 8.14 -2.39 -0.02 -0.99 16 50 H 0.11 -0.70 8.10 -2.39 -0.02 -0.72 16 51 H 0.40 -3.50 9.12 -74.06 -0.68 -4.18 16 52 H 0.07 0.72 7.85 -2.39 -0.02 0.70 16 53 H 0.11 0.58 8.14 -2.39 -0.02 0.56 16 Total: 0.00 -27.66 448.74 -0.87 -28.54 By element: Atomic # 1 Polarization: -14.88 SS G_CDS: -1.07 Total: -15.95 kcal Atomic # 6 Polarization: 8.04 SS G_CDS: 5.48 Total: 13.52 kcal Atomic # 7 Polarization: -1.25 SS G_CDS: -2.15 Total: -3.40 kcal Atomic # 8 Polarization: -16.63 SS G_CDS: -5.19 Total: -21.83 kcal Atomic # 14 Polarization: -2.93 SS G_CDS: 2.05 Total: -0.88 kcal Total: -27.66 -0.87 -28.54 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_4549632.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.470 kcal (2) G-P(sol) polarization free energy of solvation -27.663 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.133 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.874 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.537 kcal (6) G-S(sol) free energy of system = (1) + (5) -149.007 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.73 seconds