Wall clock time and date at job start Sat Mar 6 2021 21:16:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34237 * 116.99834 * 2 1 4 4 O 1.20829 * 119.99648 * 0.02562 * 3 2 1 5 5 C 1.50693 * 119.99951 * 179.97438 * 3 2 1 6 6 N 1.46502 * 112.85323 * 35.51772 * 5 3 2 7 7 C 1.34777 * 120.00027 * 66.98428 * 6 5 3 8 8 O 1.21268 * 120.00125 * 354.96170 * 7 6 5 9 9 C 1.50698 * 119.99478 * 174.95563 * 7 6 5 10 10 O 1.42905 * 109.46799 * 180.02562 * 9 7 6 11 11 C 1.35996 * 116.99941 * 180.02562 * 10 9 7 12 12 C 1.39156 * 120.07602 * 180.25379 * 11 10 9 13 13 O 1.35994 * 120.07062 * 359.97438 * 12 11 10 14 14 C 1.42900 * 117.00115 * 180.30436 * 13 12 11 15 15 C 1.38562 * 119.85632 * 180.27404 * 12 11 10 16 16 C 1.38247 * 119.99737 * 359.71831 * 15 12 11 17 17 C 1.50697 * 119.92451 * 180.02562 * 16 15 12 18 18 O 1.42903 * 109.47093 * 65.02381 * 17 16 15 19 19 Si 1.86293 * 109.47183 * 185.02320 * 17 16 15 20 20 C 1.38246 * 120.14756 * 0.02562 * 16 15 12 21 21 C 1.38244 * 120.14967 * 359.97438 * 20 16 15 22 22 C 1.53777 * 113.69345 * 264.24033 * 5 3 2 23 23 C 1.53772 * 87.08736 * 220.01163 * 22 5 3 24 24 H 1.08990 * 113.61862 * 139.98219 * 23 22 5 25 25 O 1.42902 * 113.61668 * 270.88534 * 23 22 5 26 26 C 1.53779 * 87.07874 * 25.43236 * 23 22 5 27 27 H 1.08996 * 109.47112 * 60.00406 * 1 2 3 28 28 H 1.09006 * 109.46474 * 180.02562 * 1 2 3 29 29 H 1.09000 * 109.47124 * 299.99765 * 1 2 3 30 30 H 0.97009 * 119.99469 * 246.99562 * 6 5 3 31 31 H 1.09004 * 109.47652 * 60.00739 * 9 7 6 32 32 H 1.09000 * 109.47592 * 300.00233 * 9 7 6 33 33 H 1.08993 * 109.47252 * 59.99517 * 14 13 12 34 34 H 1.08997 * 109.46894 * 180.02562 * 14 13 12 35 35 H 1.08996 * 109.46530 * 299.99421 * 14 13 12 36 36 H 1.08000 * 120.00227 * 179.70086 * 15 12 11 37 37 H 1.08998 * 109.47104 * 305.02530 * 17 16 15 38 38 H 0.96697 * 113.99928 * 59.99741 * 18 17 16 39 39 H 1.48503 * 110.00321 * 180.02562 * 19 17 16 40 40 H 1.48500 * 110.00129 * 301.32033 * 19 17 16 41 41 H 1.07996 * 119.92652 * 179.97438 * 20 16 15 42 42 H 1.07998 * 120.00575 * 179.97438 * 21 20 16 43 43 H 1.08998 * 113.61517 * 334.56783 * 22 5 3 44 44 H 1.09011 * 113.61082 * 105.45870 * 22 5 3 45 45 H 0.96695 * 114.00116 * 277.49812 * 25 23 22 46 46 H 1.09006 * 113.61699 * 220.01680 * 26 23 22 47 47 H 1.09000 * 113.69219 * 89.13043 * 26 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4032 2.2094 0.0005 5 6 3.5663 1.2750 0.0006 6 7 4.1923 0.2073 -0.7832 7 6 4.0356 0.1731 -2.1214 8 8 3.3030 0.9710 -2.6667 9 6 4.7709 -0.8565 -2.9400 10 8 4.4433 -0.6896 -4.3210 11 6 5.0267 -1.5460 -5.2018 12 6 4.7570 -1.4375 -6.5626 13 8 3.9090 -0.4752 -7.0147 14 6 3.6738 -0.4273 -8.4234 15 6 5.3494 -2.3161 -7.4554 16 6 6.2108 -3.2941 -6.9942 17 6 6.8546 -4.2484 -7.9666 18 8 7.7301 -3.5255 -8.8345 19 14 7.8291 -5.5286 -7.0275 20 6 6.4829 -3.3985 -5.6428 21 6 5.8952 -2.5251 -4.7467 22 6 4.1754 1.4487 1.4018 23 6 5.1713 2.4299 0.7615 24 1 5.3786 3.3053 1.3767 25 8 6.3573 1.8023 0.2697 26 6 4.1097 2.6766 -0.3234 27 1 -0.3633 0.5137 -0.8900 28 1 -0.3632 -1.0278 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 4.7195 -0.4752 -0.3390 31 1 4.4788 -1.8552 -2.6152 32 1 5.8449 -0.7298 -2.8038 33 1 3.2449 -1.3737 -8.7525 34 1 2.9815 0.3837 -8.6488 35 1 4.6162 -0.2551 -8.9433 36 1 5.1380 -2.2372 -8.5116 37 1 6.0824 -4.7409 -8.5576 38 1 8.4434 -3.0612 -8.3757 39 1 8.4696 -6.4756 -7.9753 40 1 8.8646 -4.8676 -6.1933 41 1 7.1561 -4.1641 -5.2863 42 1 6.1091 -2.6091 -3.6914 43 1 3.4992 1.9173 2.1168 44 1 4.6425 0.5436 1.7902 45 1 7.0287 1.6445 0.9473 46 1 4.5239 2.7629 -1.3280 47 1 3.4150 3.4809 -0.0815 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12808048_60476.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:16:57 Heat of formation + Delta-G solvation = -189.288413 kcal Electronic energy + Delta-G solvation = -34266.207878 eV Core-core repulsion = 29384.170185 eV Total energy + Delta-G solvation = -4882.037693 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.149 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.44580 -41.69753 -40.59947 -39.91194 -39.02590 -38.81277 -37.39325 -36.98574 -36.24906 -34.11042 -32.01827 -31.44066 -29.87237 -28.97521 -28.39744 -27.23733 -26.56529 -26.10334 -23.67264 -22.72393 -22.50777 -21.85378 -20.52476 -19.76499 -19.16372 -18.79691 -18.40256 -18.21327 -17.97254 -17.74136 -17.44047 -17.24269 -17.01283 -16.78709 -16.55340 -16.13378 -15.91943 -15.78358 -15.67129 -15.44821 -15.12898 -14.97025 -14.64254 -14.31523 -14.26854 -13.90913 -13.72644 -13.65641 -13.53190 -13.41935 -13.26736 -13.06583 -12.61878 -12.54036 -12.53410 -12.16044 -12.11441 -12.03234 -11.98068 -11.70992 -11.62384 -11.53237 -11.24906 -10.86121 -10.61390 -10.22877 -9.76649 -8.83711 -4.97861 0.19566 0.31890 1.05901 1.26546 1.35439 1.47007 1.57248 1.79094 1.94411 2.34029 2.45601 2.58420 2.77314 3.06651 3.17509 3.35354 3.39386 3.48994 3.63890 3.73742 3.79590 3.82123 3.95052 3.97088 4.11570 4.14060 4.21698 4.27972 4.30913 4.31459 4.35505 4.35857 4.41288 4.54193 4.58569 4.58941 4.65118 4.67025 4.68089 4.90635 5.02010 5.12286 5.21791 5.38721 5.41840 5.57357 5.97596 6.26704 6.39047 6.44613 6.56824 6.75430 7.07780 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.353 6.353 3 C 0.471 3.529 4 O -0.495 6.495 5 C 0.166 3.834 6 N -0.691 5.691 7 C 0.522 3.478 8 O -0.502 6.502 9 C 0.043 3.957 10 O -0.277 6.277 11 C 0.106 3.894 12 C 0.107 3.893 13 O -0.302 6.302 14 C 0.025 3.975 15 C -0.146 4.146 16 C -0.113 4.113 17 C -0.073 4.073 18 O -0.530 6.530 19 Si 0.688 3.312 20 C -0.115 4.115 21 C -0.169 4.169 22 C -0.156 4.156 23 C 0.085 3.915 24 H 0.086 0.914 25 O -0.544 6.544 26 C -0.117 4.117 27 H 0.065 0.935 28 H 0.103 0.897 29 H 0.064 0.936 30 H 0.410 0.590 31 H 0.096 0.904 32 H 0.098 0.902 33 H 0.056 0.944 34 H 0.103 0.897 35 H 0.056 0.944 36 H 0.140 0.860 37 H 0.118 0.882 38 H 0.376 0.624 39 H -0.258 1.258 40 H -0.260 1.260 41 H 0.133 0.867 42 H 0.140 0.860 43 H 0.113 0.887 44 H 0.096 0.904 45 H 0.384 0.616 46 H 0.095 0.905 47 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.053 -4.662 6.212 8.345 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.269 6.269 3 C 0.311 3.689 4 O -0.380 6.380 5 C 0.077 3.923 6 N -0.348 5.348 7 C 0.307 3.693 8 O -0.374 6.374 9 C -0.036 4.036 10 O -0.189 6.189 11 C 0.060 3.940 12 C 0.061 3.939 13 O -0.215 6.215 14 C -0.070 4.070 15 C -0.165 4.165 16 C -0.114 4.114 17 C -0.183 4.183 18 O -0.336 6.336 19 Si 0.589 3.411 20 C -0.132 4.132 21 C -0.188 4.188 22 C -0.194 4.194 23 C 0.026 3.974 24 H 0.104 0.896 25 O -0.350 6.350 26 C -0.155 4.155 27 H 0.083 0.917 28 H 0.121 0.879 29 H 0.082 0.918 30 H 0.247 0.753 31 H 0.114 0.886 32 H 0.116 0.884 33 H 0.075 0.925 34 H 0.121 0.879 35 H 0.075 0.925 36 H 0.158 0.842 37 H 0.136 0.864 38 H 0.224 0.776 39 H -0.183 1.183 40 H -0.184 1.184 41 H 0.150 0.850 42 H 0.157 0.843 43 H 0.131 0.869 44 H 0.115 0.885 45 H 0.232 0.768 46 H 0.114 0.886 47 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 2.084 -4.024 4.969 6.725 hybrid contribution 0.969 0.376 0.303 1.083 sum 3.053 -3.648 5.272 7.101 Atomic orbital electron populations 1.23325 0.75976 1.03934 1.02748 1.86500 1.23690 1.33122 1.83604 1.23686 0.91264 0.81779 0.72153 1.90684 1.66186 1.36433 1.44717 1.21066 0.84740 0.91140 0.95390 1.45175 1.54329 1.29367 1.05902 1.20039 0.81951 0.85244 0.82024 1.90822 1.35936 1.39849 1.70787 1.22407 1.00587 0.99135 0.81464 1.86274 1.65385 1.52677 1.14573 1.18286 0.96130 0.92389 0.87204 1.18283 0.94154 0.91479 0.89985 1.86253 1.60422 1.49687 1.25108 1.23128 1.01747 1.03118 0.79020 1.20939 0.99619 0.96334 0.99598 1.19965 0.99134 0.98121 0.94186 1.25009 0.97551 0.98942 0.96753 1.86599 1.43427 1.68059 1.35559 0.94944 0.83702 0.80820 0.81599 1.20730 1.00880 0.99364 0.92266 1.20996 1.00032 0.96993 1.00785 1.24006 0.99578 1.02442 0.93361 1.22625 0.84975 0.94419 0.95413 0.89613 1.86513 1.27246 1.82087 1.39150 1.23440 0.96197 0.94227 1.01637 0.91664 0.87903 0.91755 0.75316 0.88600 0.88422 0.92509 0.87896 0.92530 0.84224 0.86450 0.77610 1.18288 1.18447 0.85003 0.84266 0.86901 0.88549 0.76783 0.88603 0.85992 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.04 10.56 101.05 1.07 1.10 16 2 O -0.35 -1.06 10.42 -39.28 -0.41 -1.47 16 3 C 0.47 1.81 6.42 36.00 0.23 2.05 16 4 O -0.49 -3.21 15.66 -18.75 -0.29 -3.50 16 5 C 0.17 0.12 1.00 -132.16 -0.13 -0.01 16 6 N -0.69 0.34 4.53 -47.93 -0.22 0.13 16 7 C 0.52 1.38 7.39 -10.99 -0.08 1.30 16 8 O -0.50 -3.90 15.22 -14.34 -0.22 -4.12 16 9 C 0.04 0.00 5.22 36.00 0.19 0.19 16 10 O -0.28 -1.21 9.46 -47.35 -0.45 -1.66 16 11 C 0.11 0.32 6.70 -39.12 -0.26 0.05 16 12 C 0.11 0.39 6.70 -39.12 -0.26 0.13 16 13 O -0.30 -1.43 10.28 -34.22 -0.35 -1.79 16 14 C 0.02 0.02 9.81 101.05 0.99 1.01 16 15 C -0.15 -0.25 8.67 -39.46 -0.34 -0.59 16 16 C -0.11 -0.05 5.35 -104.62 -0.56 -0.61 16 17 C -0.07 0.02 2.80 36.00 0.10 0.12 16 18 O -0.53 -0.63 12.83 -35.23 -0.45 -1.08 16 19 Si 0.69 -0.91 29.88 -169.99 -5.08 -5.99 16 20 C -0.11 0.05 8.66 -39.58 -0.34 -0.29 16 21 C -0.17 0.01 9.04 -39.46 -0.36 -0.34 16 22 C -0.16 0.46 7.20 -25.93 -0.19 0.27 16 23 C 0.09 -0.20 5.28 -25.92 -0.14 -0.34 16 24 H 0.09 -0.33 8.14 -51.93 -0.42 -0.76 16 25 O -0.54 1.43 13.09 -35.23 -0.46 0.97 16 26 C -0.12 -0.14 6.67 -25.92 -0.17 -0.31 16 27 H 0.06 0.14 8.13 -51.93 -0.42 -0.28 16 28 H 0.10 -0.17 8.14 -51.93 -0.42 -0.59 16 29 H 0.06 0.03 8.13 -51.93 -0.42 -0.40 16 30 H 0.41 -1.66 8.67 -40.82 -0.35 -2.01 16 31 H 0.10 -0.29 7.66 -51.93 -0.40 -0.69 16 32 H 0.10 -0.26 7.66 -51.93 -0.40 -0.66 16 33 H 0.06 -0.04 7.66 -51.93 -0.40 -0.43 16 34 H 0.10 -0.06 8.14 -51.93 -0.42 -0.48 16 35 H 0.06 -0.02 7.66 -51.93 -0.40 -0.41 16 36 H 0.14 0.09 6.30 -52.49 -0.33 -0.24 16 37 H 0.12 -0.12 7.96 -51.93 -0.41 -0.53 16 38 H 0.38 -0.58 8.70 45.56 0.40 -0.19 16 39 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 40 H -0.26 -0.09 7.00 56.52 0.40 0.31 16 41 H 0.13 -0.33 4.83 -52.49 -0.25 -0.59 16 42 H 0.14 -0.45 6.30 -52.49 -0.33 -0.78 16 43 H 0.11 -0.37 8.10 -51.93 -0.42 -0.79 16 44 H 0.10 -0.48 8.10 -51.92 -0.42 -0.90 16 45 H 0.38 -2.63 9.12 45.56 0.42 -2.22 16 46 H 0.10 0.34 7.41 -51.93 -0.38 -0.05 16 47 H 0.12 0.17 7.35 -51.93 -0.38 -0.21 16 LS Contribution 397.10 15.07 5.98 5.98 Total: 0.00 -14.25 397.10 -7.59 -21.84 By element: Atomic # 1 Polarization: -7.64 SS G_CDS: -5.38 Total: -13.03 kcal Atomic # 6 Polarization: 3.98 SS G_CDS: -0.26 Total: 3.72 kcal Atomic # 7 Polarization: 0.34 SS G_CDS: -0.22 Total: 0.13 kcal Atomic # 8 Polarization: -10.02 SS G_CDS: -2.63 Total: -12.65 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.08 Total: -5.99 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -14.25 -7.59 -21.84 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_60476.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -167.451 kcal (2) G-P(sol) polarization free energy of solvation -14.251 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -181.702 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.587 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.837 kcal (6) G-S(sol) free energy of system = (1) + (5) -189.288 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds